prot_M-pyrifera_M_contig10461.998.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10461.998.1
Unique Nameprot_M-pyrifera_M_contig10461.998.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length73
Homology
BLAST of mRNA_M-pyrifera_M_contig10461.998.1 vs. uniprot
Match: A0A6H5L7R8_9PHAE (ERCC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7R8_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 5.550e-25
Identity = 50/58 (86.21%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 LQSALLQKGVPCETRQLPLGDMLWIARHEDDPTSEVLVGYIVERKTASDLASSIVDGR 58
            +QS+LLQKG+ CETRQLPLGDMLWIAR  DDPTSEVL+GYIVERKTASDLASSI+DGR
Sbjct:  264 VQSSLLQKGIRCETRQLPLGDMLWIARKRDDPTSEVLLGYIVERKTASDLASSIIDGR 321          
BLAST of mRNA_M-pyrifera_M_contig10461.998.1 vs. uniprot
Match: A0A836CKB8_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB8_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.710e-14
Identity = 38/61 (62.30%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    2 QSALLQKGVPCETRQLPLGDMLWIARHEDDPT----SEVLVGYIVERKTASDLASSIVDGR 58
            Q+A+L   + CE R LPLGDMLW+AR+ D  +     EVL+GYIVERKTASDL SS+VDGR
Sbjct:   30 QAAVLNANMLCEVRSLPLGDMLWVARNMDRQSPSYLQEVLLGYIVERKTASDLGSSMVDGR 90          
BLAST of mRNA_M-pyrifera_M_contig10461.998.1 vs. uniprot
Match: A0A7R9UCP7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCP7_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 7.270e-11
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    1 LQSALLQKGVPCETRQLPLGDMLWIARHEDDPTSEVLVGYIVERKTASDLASSIVDGR 58
            +QS LLQ+GV CE R L LGDM+WIA+        VL  +I+ERK+A+DLA SI+DGR
Sbjct:  450 VQSHLLQRGVSCENRALHLGDMIWIAQDRRSDVEYVL-DFIIERKSAADLAESIIDGR 506          
BLAST of mRNA_M-pyrifera_M_contig10461.998.1 vs. uniprot
Match: A0A642UL28_DIURU (Crossover junction endonuclease MUS81 n=1 Tax=Diutina rugosa TaxID=5481 RepID=A0A642UL28_DIURU)

HSP 1 Score: 64.3 bits (155), Expect = 2.440e-10
Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    2 QSALLQKGVPCETRQLPLGDMLWIARHEDDPTSEVLVGYIVERKTASDLASSIVDGR 58
            +  LL+ GV CE+R LP+GDM+W+ARH+     EVL+  I ERK   DLASSI DGR
Sbjct:  284 EEELLRAGVKCESRTLPVGDMVWVARHKISK-KEVLLDVIAERKRIDDLASSIKDGR 339          
BLAST of mRNA_M-pyrifera_M_contig10461.998.1 vs. uniprot
Match: A0A5K3FE98_MESCO (ERCC4 domain-containing protein n=2 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3FE98_MESCO)

HSP 1 Score: 63.9 bits (154), Expect = 2.830e-10
Identity = 35/60 (58.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    1 LQSALLQKGVPCETRQLPLGDMLWIARHEDDPTS--EVLVGYIVERKTASDLASSIVDGR 58
            L+  L    V  E R LP+GD  WIAR  + PTS  EV++G IVERK A DLASSIVDGR
Sbjct:   71 LKDLLNAHAVSWEARSLPVGDFAWIARSAEGPTSAEEVVLGVIVERKRADDLASSIVDGR 130          
BLAST of mRNA_M-pyrifera_M_contig10461.998.1 vs. uniprot
Match: A0A654I5F0_9CEST (ERCC4 domain-containing protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654I5F0_9CEST)

HSP 1 Score: 63.9 bits (154), Expect = 3.060e-10
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    1 LQSALLQKGVPCETRQLPLGDMLWIARHEDD-----PTSEVLVGYIVERKTASDLASSIVDGR 58
            L+S L    + CE R LP+GD +W+AR   D     P  EV++G ++ERK A DLASSIVDGR
Sbjct:   99 LRSDLSGVSIGCEVRSLPVGDFVWVARPLSDMSALTPFKEVVIGIVIERKRADDLASSIVDGR 161          
BLAST of mRNA_M-pyrifera_M_contig10461.998.1 vs. uniprot
Match: A0A158QW25_MESCO (ERCC4 domain-containing protein n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A158QW25_MESCO)

HSP 1 Score: 63.9 bits (154), Expect = 3.420e-10
Identity = 35/60 (58.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    1 LQSALLQKGVPCETRQLPLGDMLWIARHEDDPTS--EVLVGYIVERKTASDLASSIVDGR 58
            L+  L    V  E R LP+GD  WIAR  + PTS  EV++G IVERK A DLASSIVDGR
Sbjct:  198 LKDLLNAHAVSWEARSLPVGDFAWIARSAEGPTSAEEVVLGVIVERKRADDLASSIVDGR 257          
BLAST of mRNA_M-pyrifera_M_contig10461.998.1 vs. uniprot
Match: A0A7M3QYZ8_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3QYZ8_SPIER)

HSP 1 Score: 63.9 bits (154), Expect = 3.420e-10
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    1 LQSALLQKGVPCETRQLPLGDMLWIARHEDD-----PTSEVLVGYIVERKTASDLASSIVDGR 58
            L+S L    + CE R LP+GD +W+AR   D     P  EV++G ++ERK A DLASSIVDGR
Sbjct:  265 LRSDLSSVSIGCEVRSLPVGDFVWVARPLSDMNALTPFKEVVLGIVIERKRADDLASSIVDGR 327          
BLAST of mRNA_M-pyrifera_M_contig10461.998.1 vs. uniprot
Match: A0A168MB16_MUCCL (ERCC4 domain-containing protein (Fragment) n=2 Tax=Mucor circinelloides f. lusitanicus TaxID=29924 RepID=A0A168MB16_MUCCL)

HSP 1 Score: 62.4 bits (150), Expect = 1.200e-9
Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 0
Query:    2 QSALLQKGVPCETRQLPLGDMLWIARH--EDDPTSEVLVGYIVERKTASDLASSIVDGRCVQLCTKCMSTKAKK 73
            Q +L  KGVPC TR L LGD++WIAR     +   E+ + YIVERK   DL  SI DGR ++  T+   + A K
Sbjct:  285 QDSLAAKGVPCVTRSLDLGDVMWIARPIGSTNQAEELFLDYIVERKRLDDLVFSIKDGRFIEQKTRLKRSGANK 358          
BLAST of mRNA_M-pyrifera_M_contig10461.998.1 vs. uniprot
Match: A0A0C9M0V1_9FUNG (Crossover junction endonuclease mus81 protein n=1 Tax=Mucor ambiguus TaxID=91626 RepID=A0A0C9M0V1_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 1.220e-9
Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 0
Query:    2 QSALLQKGVPCETRQLPLGDMLWIARH--EDDPTSEVLVGYIVERKTASDLASSIVDGRCVQLCTKCMSTKAKK 73
            Q  L  KGVPC TR + LGD++WIAR     +   E+ + YIVERK   DL SSI DGR ++  T+   + A K
Sbjct:  825 QDCLTAKGVPCITRSMGLGDVIWIARPIGSTNRAEELFLDYIVERKRLDDLVSSIKDGRFIEQKTRLKRSGANK 898          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10461.998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7R8_9PHAE5.550e-2586.21ERCC4 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CKB8_9STRA1.710e-1462.30Restriction endonuclease type II-like protein n=1 ... [more]
A0A7R9UCP7_9STRA7.270e-1156.90Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A642UL28_DIURU2.440e-1056.14Crossover junction endonuclease MUS81 n=1 Tax=Diut... [more]
A0A5K3FE98_MESCO2.830e-1058.33ERCC4 domain-containing protein n=2 Tax=Mesocestoi... [more]
A0A654I5F0_9CEST3.060e-1050.79ERCC4 domain-containing protein n=1 Tax=Sparganum ... [more]
A0A158QW25_MESCO3.420e-1058.33ERCC4 domain-containing protein n=1 Tax=Mesocestoi... [more]
A0A7M3QYZ8_SPIER3.420e-1050.79Hypothetical protein n=1 Tax=Spirometra erinaceieu... [more]
A0A168MB16_MUCCL1.200e-945.95ERCC4 domain-containing protein (Fragment) n=2 Tax... [more]
A0A0C9M0V1_9FUNG1.220e-945.95Crossover junction endonuclease mus81 protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.10130coord: 14..71
e-value: 2.6E-15
score: 58.7
NoneNo IPR availablePANTHERPTHR13451CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 5..58
IPR006166ERCC4 domainPFAMPF02732ERCC4coord: 5..59
e-value: 5.0E-9
score: 36.5
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 3..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10461contigM-pyrifera_M_contig10461:882..1100 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10461.998.1mRNA_M-pyrifera_M_contig10461.998.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10461 882..1100 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10461.998.1 ID=prot_M-pyrifera_M_contig10461.998.1|Name=mRNA_M-pyrifera_M_contig10461.998.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp
LQSALLQKGVPCETRQLPLGDMLWIARHEDDPTSEVLVGYIVERKTASDL
ASSIVDGRCVQLCTKCMSTKAKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006166ERCC4_domain
IPR011335Restrct_endonuc-II-like