prot_M-pyrifera_M_contig104568.983.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig104568.983.1
Unique Nameprot_M-pyrifera_M_contig104568.983.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length125
Homology
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BLAST of mRNA_M-pyrifera_M_contig104568.983.1 vs. uniprot
Match: UPI001485E4DB (S8 family serine peptidase n=1 Tax=Roseovarius arcticus TaxID=2547404 RepID=UPI001485E4DB)

HSP 1 Score: 72.0 bits (175), Expect = 3.490e-12
Identity = 36/100 (36.00%), Postives = 61/100 (61.00%), Query Frame = 0 
Query:   26 DALFLTLYNTGRLPLKSVVINKGEYPGDTMRRAGAWVG-NLSASSDVLLCDLNPRICSRSRQTAGSRELRRETTHLAGFKMGGSP-RWKASAGNRLIVPD 123
            + L+L+L+N+G L L++V +++  +    +R    + G +   S D ++CDLNP++CSR+   A   +L   T+H+ GF    SP RW+ S GN ++VPD
Sbjct:   45 ETLYLSLFNSGNLTLRTVKMDQSPFVEHVLRNEKLFFGAHFPQSIDAMMCDLNPKLCSRTLTGAPQSQLSDLTSHVGGF--AASPGRWRTSVGNTIVVPD 142
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BLAST of mRNA_M-pyrifera_M_contig104568.983.1 vs. uniprot
Match: UPI00110F4911 (S8 family serine peptidase n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI00110F4911)

HSP 1 Score: 52.8 bits (125), Expect = 1.900e-5
Identity = 32/100 (32.00%), Postives = 56/100 (56.00%), Query Frame = 0 
Query:   28 LFLTLYNTGRLPLKSVVINKGEYPGDTMRRAGAWVGNLSASS-DVLLCDLNPRICSRSRQTAGSRELRRETTHLAGFKMGGSPRWKASAG-NRLIVPDIL 125
            ++LTLYN+ RL +KSV  ++       +R+   + G    +  D ++CDLN  IC+R R  A   + +  T++++GF +    RW+     N+L VPD++
Sbjct:   92 IYLTLYNSKRLSVKSVETSEHTVEA-VLRKERLFYGKFFPTEIDSMICDLNSDICNRERTEATGEQRQSLTSNVSGF-LPSETRWRLEPPVNKLWVPDVV 189
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104568.983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001485E4DB3.490e-1236.00S8 family serine peptidase n=1 Tax=Roseovarius arc... [more]
UPI00110F49111.900e-532.00S8 family serine peptidase n=1 Tax=unclassified Br... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104568contigM-pyrifera_M_contig104568:196..570 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104568.983.1mRNA_M-pyrifera_M_contig104568.983.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig104568 196..585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig104568.983.1 ID=prot_M-pyrifera_M_contig104568.983.1|Name=mRNA_M-pyrifera_M_contig104568.983.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
MLAAQNAEITWSARAASDSDATSAQDALFLTLYNTGRLPLKSVVINKGEY
PGDTMRRAGAWVGNLSASSDVLLCDLNPRICSRSRQTAGSRELRRETTHL
AGFKMGGSPRWKASAGNRLIVPDIL
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