prot_M-pyrifera_M_contig10448.966.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10448.966.1
Unique Nameprot_M-pyrifera_M_contig10448.966.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length228
Homology
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BLAST of mRNA_M-pyrifera_M_contig10448.966.1 vs. uniprot
Match: D7FXA4_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA4_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 2.010e-62
Identity = 96/128 (75.00%), Postives = 102/128 (79.69%), Query Frame = 0 
Query:    1 SRKSNTKSVWSQLRKACDRCTSKKVKCDGKKGCFQCRRAGATCNFSICRRSGPRDSNGHKTGKLGPIIPRQDGNISPVWTLMDGYEKVNGRRGSCRTLTQCRFAFTDGRSKTEHYHCRTPGCEYASKT 128
            SRK   K VWSQLRKACDRCTSKKV+CDGK+GCFQC R GATC+FSICRRSGPRDSNGHKTG +GPIIPR            DGYEKV GRRGSCR  +QCRF   DG+SKTEHYHCR PGCEYASKT
Sbjct:   66 SRKKTKKPVWSQLRKACDRCTSKKVRCDGKEGCFQCSRVGATCHFSICRRSGPRDSNGHKTGTIGPIIPR------------DGYEKVTGRRGSCRISSQCRFVSADGQSKTEHYHCRAPGCEYASKT 181
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BLAST of mRNA_M-pyrifera_M_contig10448.966.1 vs. uniprot
Match: A0A6H5JPG2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPG2_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 2.670e-30
Identity = 68/134 (50.75%), Postives = 78/134 (58.21%), Query Frame = 0 
Query:    2 RKSNTKSVWSQLRKACDRCTSKKVKCDGK------KGCFQCRRAGATCNFSICRRSGPRDSNGHKTGKLGPIIPRQDGNISPVWTLMDGYEKVNGRRGSCRTLTQCRFAFTDGRSKTEHYHCRTPGCEYASKTM 129
            RK +   VWSQ RKACDRCT KKV+CDG       K C  C+RAG  C F ICRRSGPRD++GHKT   G I+ R D            +EKV  R G CRT T CRF   DG    EH+HCR   C +A KT+
Sbjct:  758 RKKSKNLVWSQFRKACDRCTDKKVRCDGSNPTGGFKACTPCKRAGEACLFGICRRSGPRDAHGHKTAAAGVIMKRND------------FEKVTERLGQCRTKT-CRFVNKDGSFWREHFHCRVGDCSFAGKTL 878
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BLAST of mRNA_M-pyrifera_M_contig10448.966.1 vs. uniprot
Match: D7G066_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G066_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 5.170e-30
Identity = 68/133 (51.13%), Postives = 76/133 (57.14%), Query Frame = 0 
Query:    2 RKSNTKSVWSQLRKACDRCTSKKVKCDGK------KGCFQCRRAGATCNFSICRRSGPRDSNGHKTGKLGPIIPRQDGNISPVWTLMDGYEKVNGRRGSCRTLTQCRFAFTDGRSKTEHYHCRTPGCEYASKT 128
            RK +   VWSQ RKACDRCT KKV+CDG       K C  C+RAG  C F ICRRSGPRD +GHKT   G I+ R D            +EKV  R G CRT T CRF   DG    EH+HCR   C +A KT
Sbjct:  509 RKKSKNLVWSQFRKACDRCTDKKVRCDGSNPTGGFKACTPCKRAGEACIFGICRRSGPRDEHGHKTAAAGVIMKRND------------FEKVTERLGQCRTKT-CRFVNKDGSFWREHFHCRVGDCSFAGKT 628
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BLAST of mRNA_M-pyrifera_M_contig10448.966.1 vs. uniprot
Match: A0A6H5JRN3_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN3_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 2.160e-5
Identity = 25/42 (59.52%), Postives = 29/42 (69.05%), Query Frame = 0 
Query:   12 QLRKACDRCTSKKVKCDGKKGCFQCRRAGATCNFSICRRSGP 53
            ++R+ACD CT KKVKCDG   C QC+R    C FS C RSGP
Sbjct:  158 KIRRACDYCTQKKVKCDGTPPCRQCQRRQIECTFSPCARSGP 199
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BLAST of mRNA_M-pyrifera_M_contig10448.966.1 vs. uniprot
Match: K8YU74_NANGC (Tpa: zn 2cys6 transcription factor n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YU74_NANGC)

HSP 1 Score: 53.9 bits (128), Expect = 7.970e-5
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:   12 QLRKACDRCTSKKVKCDGKKGCFQCRRAGATCNFSICRRSGPR 54
            +LR++CDRCTSKK++CDG   C  C R G  C++S  RR+GP+
Sbjct:   11 KLRRSCDRCTSKKIRCDGLAACQNCVRRGYACHYSERRRTGPK 53
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10448.966.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FXA4_ECTSI2.010e-6275.00Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JPG2_9PHAE2.670e-3050.75Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7G066_ECTSI5.170e-3051.13Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JRN3_9PHAE2.160e-559.52Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
K8YU74_NANGC7.970e-553.49Tpa: zn 2cys6 transcription factor n=3 Tax=Monodop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 11..54
e-value: 2.5E-4
score: 30.4
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 15..45
e-value: 1.1E-6
score: 28.6
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 16..43
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 16..45
score: 9.578
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 8..64
e-value: 2.3E-8
score: 35.8
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 8..51
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 115..145
score: 9.473

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10448contigM-pyrifera_M_contig10448:2472..9503 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10448.966.1mRNA_M-pyrifera_M_contig10448.966.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10448 2472..9503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10448.966.1 ID=prot_M-pyrifera_M_contig10448.966.1|Name=mRNA_M-pyrifera_M_contig10448.966.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp
SRKSNTKSVWSQLRKACDRCTSKKVKCDGKKGCFQCRRAGATCNFSICRR
SGPRDSNGHKTGKLGPIIPRQDGNISPVWTLMDGYEKVNGRRGSCRTLTQ
CRFAFTDGRSKTEHYHCRTPGCEYASKTMEKLMAHRQELHLEQKPQQKLQ
KILEQNLEQKPQRPQKRQKMLPHQQQQQQQQPAPMFGPRPMLLPLPLPLP
PPPQQDVVAPPPALLVVQRNPDFHCED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR013087Znf_C2H2_type