prot_M-pyrifera_M_contig104321.917.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig104321.917.1
Unique Nameprot_M-pyrifera_M_contig104321.917.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length70
Homology
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BLAST of mRNA_M-pyrifera_M_contig104321.917.1 vs. uniprot
Match: A0A7I8VMV0_9ANNE (DgyrCDS5529 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VMV0_9ANNE)

HSP 1 Score: 52.4 bits (124), Expect = 1.310e-6
Identity = 19/38 (50.00%), Postives = 29/38 (76.32%), Query Frame = 0 
Query:   33 NLLYPAEDRVSRRLVYKCNRCGRHEPAQSPCVHVNRIK 70
            N+LYP ED+V++ L+Y C  C   EPA +PC++VN+I+
Sbjct:   62 NMLYPKEDKVTQTLLYACRNCEYQEPADNPCIYVNKIE 99
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BLAST of mRNA_M-pyrifera_M_contig104321.917.1 vs. uniprot
Match: A0A0R3U9D8_MESCO (DNA-directed RNA polymerase subunit n=4 Tax=Cyclophyllidea TaxID=6201 RepID=A0A0R3U9D8_MESCO)

HSP 1 Score: 51.2 bits (121), Expect = 1.820e-6
Identity = 19/38 (50.00%), Postives = 29/38 (76.32%), Query Frame = 0 
Query:   33 NLLYPAEDRVSRRLVYKCNRCGRHEPAQSPCVHVNRIK 70
            N+LYP ED+ ++RL+Y C  C   +PA +PCV+VNR++
Sbjct:   20 NMLYPKEDKRNKRLMYACRNCEYMQPADNPCVYVNRLE 57
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BLAST of mRNA_M-pyrifera_M_contig104321.917.1 vs. uniprot
Match: A0A068XWH5_ECHMU (RNA polymerase II 15 kDa subunit n=2 Tax=Echinococcus TaxID=6209 RepID=A0A068XWH5_ECHMU)

HSP 1 Score: 49.7 bits (117), Expect = 8.580e-6
Identity = 18/38 (47.37%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:   33 NLLYPAEDRVSRRLVYKCNRCGRHEPAQSPCVHVNRIK 70
            N+LYP ED+  +RL+Y C  C   +PA +PC++VNR++
Sbjct:   20 NMLYPKEDKRHKRLMYACRNCEFMQPADNPCIYVNRLE 57
[Close]
BLAST of mRNA_M-pyrifera_M_contig104321.917.1 vs. uniprot
Match: A0A4P9Y0I7_9FUNG (DNA-directed RNA polymerase subunit n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y0I7_9FUNG)

HSP 1 Score: 48.1 bits (113), Expect = 2.400e-5
Identity = 21/42 (50.00%), Postives = 26/42 (61.90%), Query Frame = 0 
Query:   29 RYSQNLLYPAEDRVSRRLVYKCNRCGRHEPAQSPCVHVNRIK 70
            R   NLLYP ED V+R+L Y C  C   E A SPCV+ + +K
Sbjct:    8 RNCNNLLYPEEDTVARKLFYGCRNCPYRETAASPCVYKHEVK 49
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104321.917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7I8VMV0_9ANNE1.310e-650.00DgyrCDS5529 n=1 Tax=Dimorphilus gyrociliatus TaxID... [more]
A0A0R3U9D8_MESCO1.820e-650.00DNA-directed RNA polymerase subunit n=4 Tax=Cyclop... [more]
A0A068XWH5_ECHMU8.580e-647.37RNA polymerase II 15 kDa subunit n=2 Tax=Echinococ... [more]
A0A4P9Y0I7_9FUNG2.400e-550.00DNA-directed RNA polymerase subunit n=1 Tax=Piptoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.25.10coord: 28..67
e-value: 4.8E-12
score: 47.1
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 31..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104321contigM-pyrifera_M_contig104321:327..536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104321.917.1mRNA_M-pyrifera_M_contig104321.917.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig104321 327..536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig104321.917.1 ID=prot_M-pyrifera_M_contig104321.917.1|Name=mRNA_M-pyrifera_M_contig104321.917.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=70bp
MKNPPFSSAANGEENRLHSAACPLLHTSRYSQNLLYPAEDRVSRRLVYKC
NRCGRHEPAQSPCVHVNRIK
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