prot_M-pyrifera_M_contig103856.821.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103856.821.1
Unique Nameprot_M-pyrifera_M_contig103856.821.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length180
Homology
BLAST of mRNA_M-pyrifera_M_contig103856.821.1 vs. uniprot
Match: A0A087SGA2_AUXPR (Large neutral amino acids transporter small subunit 4 n=4 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SGA2_AUXPR)

HSP 1 Score: 77.8 bits (190), Expect = 1.830e-13
Identity = 50/156 (32.05%), Postives = 86/156 (55.13%), Query Frame = 0
Query:   25 KLGFWEQVSTPEFLLYIMFGSFSLAKFSFYLGSLRLQLIEITGSESNALPWLSLFSLLFPIGAIADFPVGMLIDRWGIGVSFHVLVVVSVLQSICSLIPNAPLQIATFVLFAIFRAILFTAQANFFSALFGFKSFGRLLAIPTIVGGLLSTLQYPI 180
            KL F EQ  + E     +F + ++    FYLG++RLQL   +   SNA  + +  +++     +    +G L+D+ G G +   ++ +SVL  +   +P+ PLQ+ T +++   R  ++ +    F ALFGF++FGRL+A+  I  GL   LQYP+
Sbjct:  358 KLSFLEQFKSSESFGMGLFYTLNVFTMQFYLGTMRLQL---SNKGSNAETYSNFGNVVVAFAFLLIPVIGWLLDKKGYGSTLGSILGLSVLTLVLQALPSLPLQVVTILIWMTARFFMYASYFAIFGALFGFRNFGRLVAVDNIFNGLFGLLQYPL 510          
BLAST of mRNA_M-pyrifera_M_contig103856.821.1 vs. uniprot
Match: R1BBP7_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BBP7_EMIHU)

HSP 1 Score: 56.2 bits (134), Expect = 5.390e-6
Identity = 54/168 (32.14%), Postives = 77/168 (45.83%), Query Frame = 0
Query:   14 TPRHLVAPPYEKLGFWEQVSTPEFLLYIMFGSFSLAKFSFYLGSLRLQLIEITGS----ESNALPWLSLFSLLFPIGAIADFPVGMLIDRWGIGVSFHVLVVVSVLQSICSLIPNAPLQIATFVLFAIFRAILFTAQANFFSALFGFKSFGRLLAIPTIVGGLLSTLQ 177
            TP  L A P       +QV + EF    +F +  + + + YLGS+ L   E   S    E       SL  L+ P G IA   +   I   G+  +F V   + VL S   L+P+   Q+   V+FA FRA LF+  A F  A FG  S GR++ +   V  L++  Q
Sbjct:  238 TPTELAAKP-----LLQQVRSLEFATVCLFATVQVTRSNLYLGSVDLTNREYASSNGWPEGALESTTSLVGLIVPFGFIAVPFIEASIHLTGLIGTFLVTSALGVLFSCLQLLPSQAAQVGGAVVFAAFRAFLFSTLAAFNGATFGPSSMGRIMGLCMFVSSLVNLCQ 400          
BLAST of mRNA_M-pyrifera_M_contig103856.821.1 vs. uniprot
Match: K3WGB5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGB5_GLOUD)

HSP 1 Score: 52.8 bits (125), Expect = 7.250e-5
Identity = 43/153 (28.10%), Postives = 71/153 (46.41%), Query Frame = 0
Query:   28 FWEQVSTPEFLLYIMFGSFSLAKFSFYLGSLRLQLIEITGSESNALPWLSLFSLLFPIGAIADFPVGMLIDRWGIGVSFHVLVVVSVLQSICSLIPNAPLQIATFVLFAIFRAILFTAQANFFSALFGFKSFGRLLAIPTIVGGLLSTLQYPI 180
            F  QV +  FLL   F +      +F++GS+  QL     +       L+  +++ P   +    VG L++ WG      +    ++L ++ S      + +  FVL+A+FR ILF+    +    FGF+ FG L  I   VG ++  LQ PI
Sbjct:  285 FKTQVRSAPFLLMCFFFAVESLWCNFFIGSVTAQLRSQHLAPETVSALLAKLAVVLPSSVVFIPLVGYLLEAWGYTHVTFLCAGSALLFTVLSWSTTVGVLLLAFVLYALFRTILFSVLFAYIGQTFGFQHFGALTGIAFCVGAVVGLLQTPI 437          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103856.821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A087SGA2_AUXPR1.830e-1332.05Large neutral amino acids transporter small subuni... [more]
R1BBP7_EMIHU5.390e-632.14Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
K3WGB5_GLOUD7.250e-528.10Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR20772FAMILY NOT NAMEDcoord: 24..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..179
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 151..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 56..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 124..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 180..180
NoneNo IPR availableTMHMMTMhelixcoord: 103..125
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 36..58
NoneNo IPR availableTMHMMTMhelixcoord: 132..154
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 15..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103856contigM-pyrifera_M_contig103856:18..557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103856.821.1mRNA_M-pyrifera_M_contig103856.821.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103856 18..557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103856.821.1 ID=prot_M-pyrifera_M_contig103856.821.1|Name=mRNA_M-pyrifera_M_contig103856.821.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
SSSIEPSSSQSSLTPRHLVAPPYEKLGFWEQVSTPEFLLYIMFGSFSLAK
FSFYLGSLRLQLIEITGSESNALPWLSLFSLLFPIGAIADFPVGMLIDRW
GIGVSFHVLVVVSVLQSICSLIPNAPLQIATFVLFAIFRAILFTAQANFF
SALFGFKSFGRLLAIPTIVGGLLSTLQYPI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf