prot_M-pyrifera_M_contig103740.798.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103740.798.1
Unique Nameprot_M-pyrifera_M_contig103740.798.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length185
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103740.798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..185
e-value: 2.1E-23
score: 84.8
NoneNo IPR availablePANTHERPTHR13382:SF6SCF E3 UBIQUITIN LIGASE COMPLEX F-BOX PROTEIN GRR1coord: 10..179
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 10..179
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 12..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103740contigM-pyrifera_M_contig103740:18..572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103740.798.1mRNA_M-pyrifera_M_contig103740.798.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103740 18..572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103740.798.1 ID=prot_M-pyrifera_M_contig103740.798.1|Name=mRNA_M-pyrifera_M_contig103740.798.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
MLGEVGLGTLALKCPNLVALSAGAIHASISSKAMTEVGRCHTLRVLDLSD
SPWMTDDCLEQLMQRGFPRMVSFSLAGCTELSEDGGRFFGEERRPSGIFR
TATPRLPRLQFLDISGCVGFGHGTATDVVSGCPAIRALDASGTSIATDPS
MDPFSEAKDLRFLRLSGSARISDAGIARLCGASAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf