prot_M-pyrifera_M_contig103735.797.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103735.797.1
Unique Nameprot_M-pyrifera_M_contig103735.797.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length215
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103735.797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 144..172
e-value: 110.0
score: 4.2
coord: 42..70
e-value: 19.0
score: 12.8
coord: 112..140
e-value: 18.0
score: 12.9
coord: 78..106
e-value: 28.0
score: 10.8
coord: 4..38
e-value: 56.0
score: 7.5
NoneNo IPR availableGENE3D2.10.25.10coord: 4..41
e-value: 3.0E-6
score: 29.1
NoneNo IPR availableGENE3D2.10.25.10coord: 143..176
e-value: 2.1E-5
score: 26.0
coord: 42..74
e-value: 2.9E-6
score: 28.7
coord: 111..141
e-value: 4.3E-8
score: 34.6
coord: 77..108
e-value: 2.1E-8
score: 35.6
NoneNo IPR availablePANTHERPTHR11219:SF69TENEURIN-Mcoord: 12..175
NoneNo IPR availablePANTHERPTHR11219TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASEcoord: 78..203
NoneNo IPR availablePANTHERPTHR11219:SF69TENEURIN-Mcoord: 78..203
NoneNo IPR availablePANTHERPTHR11219TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASEcoord: 12..175
NoneNo IPR availablePRODOMPD936484coord: 15..160
e-value: 2.0E-4
score: 105.0
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 13..39
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 82..107
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 116..140
IPR041161Tenascin, EGF-like domainPFAMPF18720EGF_Tenascincoord: 145..172
e-value: 0.0085
score: 16.1
coord: 43..70
e-value: 3.2E-6
score: 27.1
IPR013111EGF-like domain, extracellularPFAMPF07974EGF_2coord: 113..139
e-value: 6.9E-5
score: 23.1
coord: 79..105
e-value: 3.4E-5
score: 24.1
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 160..171
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 160..171
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 58..69
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 128..139
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 94..105
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 128..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103735contigM-pyrifera_M_contig103735:3..647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103735.797.1mRNA_M-pyrifera_M_contig103735.797.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103735 3..647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103735.797.1 ID=prot_M-pyrifera_M_contig103735.797.1|Name=mRNA_M-pyrifera_M_contig103735.797.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=215bp
IEEKCPTAGNSSAACSGHGRCYRGACTCEAGFAGGDCSVAATCPSRCSDR
GVCVGGRCLCVAGFGGDDCSELTEGYEICPRQCSGNGVCELGRCFCDPGW
DGPACDRVLHAPCPASCSGHGVCQHGSCFCHPGFSGEDCARAQPCPGGCG
EHGVCRYGQCYCQRGYDGVNCSRVVAQVAEAGASEHGNGGPNDCSMHGAC
YAGAGGREPGQAGDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR041161EGF_Tenascin
IPR013111EGF_extracell
IPR013032EGF-like_CS