prot_M-pyrifera_M_contig102917.616.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102917.616.1
Unique Nameprot_M-pyrifera_M_contig102917.616.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length58
Homology
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BLAST of mRNA_M-pyrifera_M_contig102917.616.1 vs. uniprot
Match: UPI000711F52D (GTPase-activating protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711F52D)

HSP 1 Score: 58.9 bits (141), Expect = 3.820e-9
Identity = 32/57 (56.14%), Postives = 45/57 (78.95%), Query Frame = 0 
Query:    2 VDDSKLKLPETKLEKVEQKA-DEDEEEVHVERAKLYRFVKEETYADEVRKNLWKERG 57
            V+D+KLKLP   ++KVE K+ +EDE+ ++ ERA+L+ F  E+ Y DEVRKN+WKERG
Sbjct:   14 VEDAKLKLPTKVIDKVETKSGEEDEDLIYHERARLFLFFAEDKYGDEVRKNIWKERG 70
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BLAST of mRNA_M-pyrifera_M_contig102917.616.1 vs. uniprot
Match: A0A196SB90_BLAHN (E3 SUMO-protein ligase RanBP2 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SB90_BLAHN)

HSP 1 Score: 58.2 bits (139), Expect = 7.790e-9
Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 0 
Query:    2 VDDSKLKLPETKLEKVEQKADEDEEEVHV-ERAKLYRFVKEETYADEVRKNLWKERG 57
            V+DSKLKLPE  +  VE K  E+EE+V   ER++L+ F +E+ Y DEVRKN+WKERG
Sbjct:   14 VEDSKLKLPEKAIAAVETKTGEEEEDVVFHERSRLFLFFEEDKYGDEVRKNIWKERG 70
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102917.616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI000711F52D3.820e-956.14GTPase-activating protein n=1 Tax=Blastocystis sp.... [more]
A0A196SB90_BLAHN7.790e-957.89E3 SUMO-protein ligase RanBP2 n=1 Tax=Blastocystis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 14..34
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 4..57
e-value: 3.9E-6
score: 28.5
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 7..57
score: 9.001

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102917contigM-pyrifera_M_contig102917:442..615 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102917.616.1mRNA_M-pyrifera_M_contig102917.616.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102917 433..615 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102917.616.1 ID=prot_M-pyrifera_M_contig102917.616.1|Name=mRNA_M-pyrifera_M_contig102917.616.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=58bp
MVDDSKLKLPETKLEKVEQKADEDEEEVHVERAKLYRFVKEETYADEVRK
NLWKERG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf
IPR000156Ran_bind_dom