prot_M-pyrifera_M_contig101987.427.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101987.427.1
Unique Nameprot_M-pyrifera_M_contig101987.427.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length124
Homology
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BLAST of mRNA_M-pyrifera_M_contig101987.427.1 vs. uniprot
Match: A0A4P9Y227_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y227_9FUNG)

HSP 1 Score: 51.2 bits (121), Expect = 1.940e-5
Identity = 42/113 (37.17%), Postives = 57/113 (50.44%), Query Frame = 0 
Query:    2 LTHLPDELGFCRRLRVLHVQR----NRLQTLPTTF-ASLHRLEEMDVSHNELTWVPEQLLNVDESLADALAQGKVSLEAIEGETRGCLSLRSLDLSHNCLTALPLSLCKCKTL 109
            L HLP  LG C RLR+L +      N L +LP +  +SL  LEE+D+S N LT +P+            LA                L+LRSLD+S N L +LP +L +C+ L
Sbjct:   18 LPHLPRSLGQCTRLRILRLGSVYGGNLLTSLPDSLISSLPHLEELDLSGNHLTHLPD------------LAWP--------------LTLRSLDVSDNSLISLPSNLGQCQRL 104
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101987.427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A4P9Y227_9FUNG1.940e-537.17Uncharacterized protein (Fragment) n=1 Tax=Piptoce... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 83..106
e-value: 5.8
score: 15.2
coord: 12..34
e-value: 22.0
score: 10.5
coord: 35..58
e-value: 2.2
score: 17.3
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 12..31
e-value: 17.0
score: 12.0
coord: 35..54
e-value: 20.0
score: 11.5
coord: 83..102
e-value: 310.0
score: 2.3
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 2..123
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..120
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 83..97
e-value: 0.02
score: 14.9
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 2..48
e-value: 3.5E-7
score: 29.9
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 37..58
score: 5.071
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 14..35
score: 5.556
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 85..105
score: 7.735
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 66..124
e-value: 8.5E-8
score: 33.6
coord: 1..64
e-value: 3.5E-13
score: 51.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101987contigM-pyrifera_M_contig101987:3..374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101987.427.1mRNA_M-pyrifera_M_contig101987.427.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101987 3..374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101987.427.1 ID=prot_M-pyrifera_M_contig101987.427.1|Name=mRNA_M-pyrifera_M_contig101987.427.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
DLTHLPDELGFCRRLRVLHVQRNRLQTLPTTFASLHRLEEMDVSHNELTW
VPEQLLNVDESLADALAQGKVSLEAIEGETRGCLSLRSLDLSHNCLTALP
LSLCKCKTLACFYVHDNPFLLLPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf