prot_M-pyrifera_M_contig101974.425.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101974.425.1
Unique Nameprot_M-pyrifera_M_contig101974.425.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length63
Homology
BLAST of mRNA_M-pyrifera_M_contig101974.425.1 vs. uniprot
Match: D7FHQ9_ECTSI (Translocation protein SEC62 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHQ9_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 2.000e-34
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 VWTFEKGSTGQGYYRVVAVGGVVAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSE 61
            VWTFEKGS+GQGYYRVVAVGGV+AFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSE
Sbjct:  206 VWTFEKGSSGQGYYRVVAVGGVIAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSE 266          
BLAST of mRNA_M-pyrifera_M_contig101974.425.1 vs. uniprot
Match: A0A835ZAL0_9STRA (Translocation protein SEC62 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL0_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 9.720e-21
Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 VWTFEKGSTGQGYYRVVAVGGVVAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSE 61
            VW+ E GS GQGYYR   +   VAFV WAY QPTDFD+FI+AQ DF+SDLY G LLSDVS+
Sbjct:  205 VWSLEPGSKGQGYYRSTILVAFVAFVYWAYTQPTDFDSFIAAQKDFVSDLYEGNLLSDVSQ 265          
BLAST of mRNA_M-pyrifera_M_contig101974.425.1 vs. uniprot
Match: A0A482SKX2_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKX2_9ARCH)

HSP 1 Score: 84.0 bits (206), Expect = 1.420e-18
Identity = 33/60 (55.00%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    1 VWTFEKGSTGQGYYRVVAVGGVVAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVS 60
            +++FEKGSTGQG YR+  V  ++ F  WAY QPT+FD F++AQ +F+ DLY+GKL++DV+
Sbjct:   89 IYSFEKGSTGQGLYRLALVASLIGFGYWAYTQPTEFDGFLTAQKEFIDDLYSGKLIADVA 148          
BLAST of mRNA_M-pyrifera_M_contig101974.425.1 vs. uniprot
Match: A0A6S8BIM4_9STRA (Translocation protein SEC62 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8BIM4_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 7.170e-18
Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    2 WTFEKGSTGQGYYRVVAVGGVVAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSE 61
            ++FE G+ GQ YYR   V  +++F I+ YNQPTDFDTF++AQ DF+SDLY GKL+SD S+
Sbjct:  205 YSFENGAPGQRYYRFALVTSLISFAIYCYNQPTDFDTFLAAQRDFVSDLYEGKLISDTSQ 264          
BLAST of mRNA_M-pyrifera_M_contig101974.425.1 vs. uniprot
Match: A0A7R9YBG5_9STRA (Translocation protein SEC62 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBG5_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.610e-17
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0
Query:    1 VWTFEKGSTGQGYYRVVAVGGVVAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSE 61
            +++ EK + GQ Y+R+  +G +VAF +WA NQPTDFDTFISAQ DF+ DLY+G LLSD S+
Sbjct:  198 LYSLEKSAPGQMYWRLGFLGALVAFGVWAANQPTDFDTFISAQKDFLDDLYSGNLLSDTSQ 258          
BLAST of mRNA_M-pyrifera_M_contig101974.425.1 vs. uniprot
Match: A0A7S2V2J2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2J2_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 6.460e-16
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    1 VWTFEKGSTGQGYYRVVAVGGVVAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSE 61
            V+TFEK   GQGYYR   + G+ A   WAY QPT+FD+ I AQ  F+ DLY G LL+D S+
Sbjct:   17 VYTFEKSPGGQGYYRAAVLIGLGALFYWAYTQPTEFDSLIQAQKQFVDDLYEGNLLADQSQ 77          
BLAST of mRNA_M-pyrifera_M_contig101974.425.1 vs. uniprot
Match: A0A6V1K7K4_HETAK (Translocation protein SEC62 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7K4_HETAK)

HSP 1 Score: 77.4 bits (189), Expect = 2.160e-15
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    2 WTFEKGSTGQGYYRVVAVGGVVAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSE 61
            +TFEK + GQ  YR+ A G +     WAY QPTDFDTF+S Q DF+ DLY+G LLSD+S+
Sbjct:  199 YTFEKVAGGQLIYRLGAFGAIGGLFYWAYTQPTDFDTFLSVQRDFLDDLYSGNLLSDMSQ 258          
BLAST of mRNA_M-pyrifera_M_contig101974.425.1 vs. uniprot
Match: I2CPB5_NANGC (Translocation protein SEC62 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CPB5_NANGC)

HSP 1 Score: 74.3 bits (181), Expect = 3.930e-14
Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    1 VWTFEKGSTGQGYYRVVAVGGVVAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSE 61
            ++++EK   GQG YR   V   VAFV WAY+QPT+FD+ ++AQ  FM DLY G LL+DV++
Sbjct:  232 LYSWEKSPPGQGIYRASLVLAFVAFVYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLADVAQ 292          
BLAST of mRNA_M-pyrifera_M_contig101974.425.1 vs. uniprot
Match: A0A6U3TWY7_9STRA (Translocation protein SEC62 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TWY7_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 8.220e-14
Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    1 VWTFEKGSTGQGYYRVVAVGGVVAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSE 61
            +++FEK   GQ  YR+    G  +F  WA  QP++FD FISAQ DF+SDLY GKLLSD+S+
Sbjct:  167 IFSFEKSPPGQFLYRLGVAVGFFSFCWWAVTQPSEFDGFISAQGDFISDLYQGKLLSDMSQ 227          
BLAST of mRNA_M-pyrifera_M_contig101974.425.1 vs. uniprot
Match: A0A7S2SAW3_9STRA (Translocation protein SEC62 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SAW3_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.230e-12
Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    1 VWTFEKGSTGQGYYRVVAVGGVVAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSE 61
            V + EK   GQ  YR+  + G+ +F  WA  QP++FD F+SAQ DF+ DLYAG LLSDVS+
Sbjct:  230 VISIEKTKPGQLMYRIGVLVGLSSFCYWAVTQPSEFDGFVSAQGDFLKDLYAGTLLSDVSQ 290          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101974.425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FHQ9_ECTSI2.000e-3496.72Translocation protein SEC62 n=2 Tax=Ectocarpus Tax... [more]
A0A835ZAL0_9STRA9.720e-2167.21Translocation protein SEC62 n=1 Tax=Tribonema minu... [more]
A0A482SKX2_9ARCH1.420e-1855.00Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A6S8BIM4_9STRA7.170e-1858.33Translocation protein SEC62 n=1 Tax=Aureoumbra lag... [more]
A0A7R9YBG5_9STRA1.610e-1759.02Translocation protein SEC62 (Fragment) n=1 Tax=Pin... [more]
A0A7S2V2J2_9STRA6.460e-1654.10Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1K7K4_HETAK2.160e-1556.67Translocation protein SEC62 n=1 Tax=Heterosigma ak... [more]
I2CPB5_NANGC3.930e-1452.46Translocation protein SEC62 n=2 Tax=Nannochloropsi... [more]
A0A6U3TWY7_9STRA8.220e-1454.10Translocation protein SEC62 n=2 Tax=Ditylum bright... [more]
A0A7S2SAW3_9STRA1.230e-1252.46Translocation protein SEC62 n=1 Tax=Eucampia antar... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 13..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101974contigM-pyrifera_M_contig101974:375..563 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101974.425.1mRNA_M-pyrifera_M_contig101974.425.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101974 375..563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101974.425.1 ID=prot_M-pyrifera_M_contig101974.425.1|Name=mRNA_M-pyrifera_M_contig101974.425.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=63bp
VWTFEKGSTGQGYYRVVAVGGVVAFVIWAYNQPTDFDTFISAQSDFMSDL
YAGKLLSDVSEV*
back to top