prot_M-pyrifera_M_contig101913.411.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101913.411.1
Unique Nameprot_M-pyrifera_M_contig101913.411.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length79
Homology
BLAST of mRNA_M-pyrifera_M_contig101913.411.1 vs. uniprot
Match: A0A6A5NPJ1_LUPAL (Putative thioredoxin-like, endoplasmic reticulum vesicle transporter n=2 Tax=Lupinus TaxID=3869 RepID=A0A6A5NPJ1_LUPAL)

HSP 1 Score: 54.7 bits (130), Expect = 7.810e-7
Identity = 27/84 (32.14%), Postives = 43/84 (51.19%), Query Frame = 0
Query:    1 GVVTPEYEHSALTEEERAHGAFEATGGSLREYLDSHTLVAVAFTASWCSHCQVLKPTWDKVASDLRA-----YDEHVRLARVEC 79
            G V    +H    +EE   G+   T  +  +Y+    +  V F A WCS CQ LKP+W+KVA+ ++       D  + +A+V+C
Sbjct:  123 GTVANAVKHDDEVDEESVEGSLSLTEHNFNKYIHQFPITVVNFYAPWCSWCQRLKPSWEKVANIIKERYDPEIDGRILVAKVDC 206          
BLAST of mRNA_M-pyrifera_M_contig101913.411.1 vs. uniprot
Match: G8Y527_PICSO (Piso0_005426 protein n=2 Tax=Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL Y-12695) TaxID=559304 RepID=G8Y527_PICSO)

HSP 1 Score: 51.2 bits (121), Expect = 1.280e-5
Identity = 20/37 (54.05%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   41 VAFTASWCSHCQVLKPTWDKVASDLRAYDEHVRLARV 77
            VAFTASWC HC+ LKP W+K+A+ +   DE +++A+V
Sbjct:  168 VAFTASWCPHCERLKPVWEKLANVIFDRDEQIKIAQV 204          
BLAST of mRNA_M-pyrifera_M_contig101913.411.1 vs. uniprot
Match: A0A8K0KG75_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KG75_LADFU)

HSP 1 Score: 48.9 bits (115), Expect = 8.440e-5
Identity = 19/39 (48.72%), Postives = 29/39 (74.36%), Query Frame = 0
Query:   41 VAFTASWCSHCQVLKPTWDKVASDLRAYDEHVRLARVEC 79
            V F A WC+HCQ L PTW+K+A  L +Y+E V +++++C
Sbjct:  198 VKFYAPWCTHCQRLAPTWEKLAESL-SYEEGVSISKIDC 235          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101913.411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6A5NPJ1_LUPAL7.810e-732.14Putative thioredoxin-like, endoplasmic reticulum v... [more]
G8Y527_PICSO1.280e-554.05Piso0_005426 protein n=2 Tax=Pichia sorbitophila (... [more]
A0A8K0KG75_LADFU8.440e-548.72Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 31..79
e-value: 2.2E-10
score: 40.5
NoneNo IPR availableGENE3D3.40.30.10coord: 6..79
e-value: 1.5E-13
score: 52.5
NoneNo IPR availablePANTHERPTHR18929:SF132PROTEIN DISULFIDE-ISOMERASE A3coord: 19..79
NoneNo IPR availablePANTHERPTHR18929PROTEIN DISULFIDE ISOMERASEcoord: 19..79
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 23..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101913contigM-pyrifera_M_contig101913:430..666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101913.411.1mRNA_M-pyrifera_M_contig101913.411.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101913 430..666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101913.411.1 ID=prot_M-pyrifera_M_contig101913.411.1|Name=mRNA_M-pyrifera_M_contig101913.411.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp
GVVTPEYEHSALTEEERAHGAFEATGGSLREYLDSHTLVAVAFTASWCSH
CQVLKPTWDKVASDLRAYDEHVRLARVEC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf