prot_M-pyrifera_M_contig101906.406.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101906.406.1
Unique Nameprot_M-pyrifera_M_contig101906.406.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length73
Homology
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BLAST of mRNA_M-pyrifera_M_contig101906.406.1 vs. uniprot
Match: A0A8J5RBF8_ZIZPA (Uncharacterized protein n=2 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5RBF8_ZIZPA)

HSP 1 Score: 48.5 bits (114), Expect = 7.000e-5
Identity = 28/63 (44.44%), Postives = 34/63 (53.97%), Query Frame = 0 
Query:   10 EDKSPYTPPVFSELDIGLQASFHRFLIDLGVGDEFADAVRAVADQKEHFEYLRWLKKVHAAIS 72
            EDK  Y  PVF  LD  LQ  F R+L   GV  + A +VR    QKEH +Y+ WLK +    S
Sbjct:  159 EDK--YEGPVFRYLDPRLQLIFDRYLQARGVNSKLASSVRHHLIQKEHVQYVSWLKSLEEMFS 219
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101906.406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8J5RBF8_ZIZPA7.000e-544.44Uncharacterized protein n=2 Tax=Zizania palustris ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036561Mitochondrial glycoprotein superfamilyGENE3D3.10.280.10coord: 3..71
e-value: 2.1E-16
score: 62.4
IPR036561Mitochondrial glycoprotein superfamilySUPERFAMILY54529Mitochondrial glycoprotein MAM33-likecoord: 11..68
IPR003428Mitochondrial glycoproteinPFAMPF02330MAM33coord: 9..68
e-value: 8.6E-15
score: 55.3
IPR003428Mitochondrial glycoproteinPANTHERPTHR10826COMPLEMENT COMPONENT 1coord: 12..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101906contigM-pyrifera_M_contig101906:327..545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101906.406.1mRNA_M-pyrifera_M_contig101906.406.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101906 327..545 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101906.406.1 ID=prot_M-pyrifera_M_contig101906.406.1|Name=mRNA_M-pyrifera_M_contig101906.406.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp
PRGTDPRSIEDKSPYTPPVFSELDIGLQASFHRFLIDLGVGDEFADAVRA
VADQKEHFEYLRWLKKVHAAIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036561MAM33_sf
IPR003428MAM33