prot_M-pyrifera_M_contig101876.397.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101876.397.1
Unique Nameprot_M-pyrifera_M_contig101876.397.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length53
Homology
BLAST of mRNA_M-pyrifera_M_contig101876.397.1 vs. uniprot
Match: A0A7S4IB38_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IB38_9EUKA)

HSP 1 Score: 77.4 bits (189), Expect = 2.640e-15
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0
Query:   10 RYPNCRLFLGNLASEKTSKEELRDIFGKYGNIIEDPVLRRSFGF 53
            R PNCRLF+GNLASE+TSK ELR IF KYG+IIE+PV+RR FGF
Sbjct:    9 RPPNCRLFIGNLASERTSKSELRSIFSKYGDIIEEPVIRRCFGF 52          
BLAST of mRNA_M-pyrifera_M_contig101876.397.1 vs. uniprot
Match: A0A7S0VGK7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VGK7_9CRYP)

HSP 1 Score: 67.4 bits (163), Expect = 2.540e-13
Identity = 27/50 (54.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    4 PSTLSERYPNCRLFLGNLASEKTSKEELRDIFGKYGNIIEDPVLRRSFGF 53
            P  +++  PNCR+F+GNLA+EKT+ +E+ +IF +YG + E+P+LRRSFGF
Sbjct:    3 PPGVAKHPPNCRVFIGNLATEKTTPQEVANIFQRYGRLAEEPLLRRSFGF 52          
BLAST of mRNA_M-pyrifera_M_contig101876.397.1 vs. uniprot
Match: A0A7S0UC54_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UC54_HEMAN)

HSP 1 Score: 63.9 bits (154), Expect = 7.150e-12
Identity = 25/42 (59.52%), Postives = 36/42 (85.71%), Query Frame = 0
Query:   12 PNCRLFLGNLASEKTSKEELRDIFGKYGNIIEDPVLRRSFGF 53
            PNCR+F+GNLA+EKT+ +E+ +IF ++G + E P+LRRSFGF
Sbjct:   28 PNCRVFIGNLATEKTTSQEVAEIFQRFGRLAEPPLLRRSFGF 69          
BLAST of mRNA_M-pyrifera_M_contig101876.397.1 vs. uniprot
Match: A0A7S0N629_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N629_9CRYP)

HSP 1 Score: 62.0 bits (149), Expect = 3.990e-11
Identity = 24/42 (57.14%), Postives = 35/42 (83.33%), Query Frame = 0
Query:   12 PNCRLFLGNLASEKTSKEELRDIFGKYGNIIEDPVLRRSFGF 53
            PNCR+F+GNLASE+TS +E+  IF K+G + E+P +R++FGF
Sbjct:   10 PNCRVFIGNLASERTSPQEIAHIFEKHGRLAEEPTVRKTFGF 51          
BLAST of mRNA_M-pyrifera_M_contig101876.397.1 vs. uniprot
Match: A0A2V3IZT0_9FLOR (Heterogeneous nuclear ribonucleoprotein C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZT0_9FLOR)

HSP 1 Score: 65.5 bits (158), Expect = 4.280e-11
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    4 PSTLSERYPNCRLFLGNLASEKTSKEELRDIFGKYGNIIEDPVLRRSFGF 53
            P  +  R  N R+F+GNLASE TS  E+ +IF KYG +IE+PVLRRSFGF
Sbjct:  368 PKYVKSRPKNARVFIGNLASEYTSPREIVEIFHKYGTLIEEPVLRRSFGF 417          
BLAST of mRNA_M-pyrifera_M_contig101876.397.1 vs. uniprot
Match: A0A7S3EF73_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EF73_9RHOD)

HSP 1 Score: 65.1 bits (157), Expect = 5.840e-11
Identity = 26/42 (61.90%), Postives = 36/42 (85.71%), Query Frame = 0
Query:   12 PNCRLFLGNLASEKTSKEELRDIFGKYGNIIEDPVLRRSFGF 53
            PN R+F+GNLASE  +K+E+ D+F KYG ++E+PV+RRSFGF
Sbjct:  168 PNSRVFIGNLASENLTKQEVVDVFEKYGRLVEEPVMRRSFGF 209          
BLAST of mRNA_M-pyrifera_M_contig101876.397.1 vs. uniprot
Match: A0A7S0FZY4_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZY4_9RHOD)

HSP 1 Score: 65.1 bits (157), Expect = 5.850e-11
Identity = 26/42 (61.90%), Postives = 36/42 (85.71%), Query Frame = 0
Query:   12 PNCRLFLGNLASEKTSKEELRDIFGKYGNIIEDPVLRRSFGF 53
            PN R+F+GNLASE  +K+E+ D+F KYG ++E+PV+RRSFGF
Sbjct:  371 PNSRVFIGNLASENLTKQEVVDVFEKYGRLVEEPVMRRSFGF 412          
BLAST of mRNA_M-pyrifera_M_contig101876.397.1 vs. uniprot
Match: A0A7S0EIZ2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EIZ2_9CRYP)

HSP 1 Score: 62.0 bits (149), Expect = 8.280e-11
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 0
Query:   12 PNCRLFLGNLASEKTSKEELRDIFGKYGNIIEDPVLRRSFGF 53
            P CR+F+GNLA+EKTS  E+  IF K+G + E PVLRRSFGF
Sbjct:   24 PFCRVFIGNLAAEKTSVHEIERIFSKHGRLAEPPVLRRSFGF 65          
BLAST of mRNA_M-pyrifera_M_contig101876.397.1 vs. uniprot
Match: R7QA32_CHOCR (RRM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA32_CHOCR)

HSP 1 Score: 63.9 bits (154), Expect = 1.500e-10
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    4 PSTLSERYPNCRLFLGNLASEKTSKEELRDIFGKYGNIIEDPVLRRSFGF 53
            P T+  R  N R+F+GNLASE T   ++  IF KYG++IE+PVLRRSFGF
Sbjct:  410 PKTVKHRPENARVFIGNLASEYTDVAQIIKIFHKYGDLIEEPVLRRSFGF 459          
BLAST of mRNA_M-pyrifera_M_contig101876.397.1 vs. uniprot
Match: M2Y4L5_GALSU (RNA-binding protein (Nab3), putative n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4L5_GALSU)

HSP 1 Score: 63.2 bits (152), Expect = 2.790e-10
Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 0
Query:   10 RYPNCRLFLGNLASEKTSKEELRDIFGKYGNIIEDPVLRRSFGF 53
            R  + R+F+GNLASE+T+  EL  IF KYGN+IE+PV+RRSFGF
Sbjct:  243 RPADSRVFIGNLASERTTVAELVSIFSKYGNLIEEPVIRRSFGF 286          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101876.397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4IB38_9EUKA2.640e-1577.27Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7S0VGK7_9CRYP2.540e-1354.00Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0UC54_HEMAN7.150e-1259.52Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0N629_9CRYP3.990e-1157.14Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A2V3IZT0_9FLOR4.280e-1160.00Heterogeneous nuclear ribonucleoprotein C n=1 Tax=... [more]
A0A7S3EF73_9RHOD5.840e-1161.90Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0FZY4_9RHOD5.850e-1161.90Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S0EIZ2_9CRYP8.280e-1164.29Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
R7QA32_CHOCR1.500e-1058.00RRM domain-containing protein n=1 Tax=Chondrus cri... [more]
M2Y4L5_GALSU2.790e-1063.64RNA-binding protein (Nab3), putative n=1 Tax=Galdi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 5..53
e-value: 6.1E-8
score: 34.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 16..43
e-value: 3.9E-5
score: 23.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 14..53
score: 10.394
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 5..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101876contigM-pyrifera_M_contig101876:506..664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101876.397.1mRNA_M-pyrifera_M_contig101876.397.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101876 506..664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101876.397.1 ID=prot_M-pyrifera_M_contig101876.397.1|Name=mRNA_M-pyrifera_M_contig101876.397.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=53bp
MSGPSTLSERYPNCRLFLGNLASEKTSKEELRDIFGKYGNIIEDPVLRRS
FGF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR035979RBD_domain_sf