prot_M-pyrifera_M_contig10179.378.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10179.378.1
Unique Nameprot_M-pyrifera_M_contig10179.378.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length283
Homology
BLAST of mRNA_M-pyrifera_M_contig10179.378.1 vs. uniprot
Match: D8LCS6_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCS6_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 1.250e-75
Identity = 176/300 (58.67%), Postives = 196/300 (65.33%), Query Frame = 0
Query:    1 VDSWLDFATSFSSEGMDGVDRHLKGRSFLAGEAFSVADVAVYFACASTAAAASAASAKKYLDFFRWFNQMQHRVRTMAPSCEVIPAAVPLDIFTPVLVPLPPKRPSASVTATAT-----------------MGDATSKGVSTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEEGTATAPAAGEKGXXXXXXXXXXXXXXXXXXXXPAARVEGHPSKLDVRVGVIVKAWEHPDSEKLFCEEIDLGEGKNRMIASGLRAAYTLEEMQGRRVTVLANLKARNLGGFKSEGMV 283
            VDSWLDF+TSFSSE +  +++HL GRSFLAG AFS+ADVAVYFACA+  AAA  A+ K+ L   RWFNQ+QHRVR +APSC V+P  V L+IF+PV VPLP K+P+ S  A                    +G   S   S+P     XXXXXXXXXXXXXXX                    +G A  PAA  KG         XXXXXXXXX       EG PSKLDVRVG IVKAWEHPDSEKLFCEEIDLGEG NR IASGLRA YTLEEMQGRRV VLANLK RN+GGFKS GMV
Sbjct:   19 VDSWLDFSTSFSSEHLASLNKHLPGRSFLAGGAFSLADVAVYFACAAAVAAAPPAAGKQ-LHLCRWFNQVQHRVRLLAPSCPVLPPTVTLNIFSPVAVPLPAKQPATSSGAAQXXXXXXXXXXXXXXXXCGVGTEKSASASSPTEGKKXXXXXXXXXXXXXXXG-------------------DGKAATPAAAAKGAPGEAKKGAXXXXXXXXXA-----AEGDPSKLDVRVGTIVKAWEHPDSEKLFCEEIDLGEGANRNIASGLRAFYTLEEMQGRRVIVLANLKPRNIGGFKSNGMV 293          
BLAST of mRNA_M-pyrifera_M_contig10179.378.1 vs. uniprot
Match: A0A835ZED8_9STRA (tRNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZED8_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.090e-28
Identity = 127/286 (44.41%), Postives = 154/286 (53.85%), Query Frame = 0
Query:    1 VDSWLDFATSFS-SEGMDGVDRHLKGRSFLAGEAFSVADVAVYFACASTAAAASAASAKKYLDFFRWFNQMQHRVRTMAPSCEV--IPAAVPLDIFTPVLVPLPPKRPSASVTATATMGDATSKGVSTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEEGTATAPAAGEKGXXXXXXXXXXXXXXXXXXXXPAARVEGHPSKLDVRVGVIVKAWEHPDSEKLFCEEIDLGEGKNRMIASGLRAAYTLEEMQGRRVTVLANLKARNLGGFKSEGMV 283
            +DSWLD   S   S     +D HL  RS+L G   ++AD AVY A A            K+ +  RW    Q  + +    C    + A+ P +   PV +P+P  +P+A+       G AT  G                   XXXXXXXXXXXXXXXXX      G++G           XXXXXXXXXXXX          +  E  P+KLD+RVGVI K W+HPDSEKL+CEEID+GE K R IASGL+A Y LEEM+ RRV VLANLK R L GFKSEGMV
Sbjct:   54 IDSWLDIVASGPISAHTASLDDHLSLRSYLVGPGLTLADAAVYIAIAQ------GQLDSKHTNVLRWALHCQCLISSACNECPPLQVTASPPRE---PVTLPVPKGKPAAAA------GGAT--GAKAAPADQKAKSDAANDAGXXXXXXXXXXXXXXXXXGEEDGKGKKGXXXXXXXXXXXXXXXXXXXXXXXAPATDGAATGSD-EADPTKLDIRVGVITKVWKHPDSEKLYCEEIDVGEDKPRQIASGLQAFYALEEMENRRVLVLANLKPRPLAGFKSEGMV 321          
BLAST of mRNA_M-pyrifera_M_contig10179.378.1 vs. uniprot
Match: A0A7S0Y8C2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8C2_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.130e-25
Identity = 55/75 (73.33%), Postives = 59/75 (78.67%), Query Frame = 0
Query:  209 SKLDVRVGVIVKAWEHPDSEKLFCEEIDLGEGKNRMIASGLRAAYTLEEMQGRRVTVLANLKARNLGGFKSEGMV 283
            S LD+RVG IVKAW HP+SEKLFCEEIDLGE   R IASGLRA Y  EE++GRRV VL NLKAR L GF S GMV
Sbjct:   43 SALDIRVGKIVKAWHHPESEKLFCEEIDLGEDAPRQIASGLRAFYKTEELEGRRVVVLCNLKARKLVGFPSHGMV 117          
BLAST of mRNA_M-pyrifera_M_contig10179.378.1 vs. uniprot
Match: A0A7S2W340_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W340_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.290e-25
Identity = 55/76 (72.37%), Postives = 65/76 (85.53%), Query Frame = 0
Query:  209 SKLDVRVGVIVKAWEHPDSEKLFCEEIDLGEGKNRMIASGLRAAYTLE-EMQGRRVTVLANLKARNLGGFKSEGMV 283
            +KLD+RVG I+KAW+H DSEKL+CEEID+GE K R+IASGLR  Y  E ++ GR+V VLANLKARNLGGFKSEGMV
Sbjct:   25 TKLDMRVGKILKAWKHEDSEKLWCEEIDIGEDKPRLIASGLRQFYADEADLTGRKVLVLANLKARNLGGFKSEGMV 100          
BLAST of mRNA_M-pyrifera_M_contig10179.378.1 vs. uniprot
Match: A0A7S2S818_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S818_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.320e-25
Identity = 55/75 (73.33%), Postives = 62/75 (82.67%), Query Frame = 0
Query:  209 SKLDVRVGVIVKAWEHPDSEKLFCEEIDLGEGKNRMIASGLRAAYTLEEMQGRRVTVLANLKARNLGGFKSEGMV 283
            +KLD+RVG IV+AWEHPDSEKLFCE ID G G+ R IASGLRA Y LE++Q R V V+ NLKAR LGGFKSEGMV
Sbjct:   75 AKLDIRVGRIVEAWEHPDSEKLFCERIDFGGGEVRNIASGLRAFYKLEDLQDRLVVVMYNLKARPLGGFKSEGMV 149          
BLAST of mRNA_M-pyrifera_M_contig10179.378.1 vs. uniprot
Match: A0A8J9SYJ0_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SYJ0_PHATR)

HSP 1 Score: 105 bits (262), Expect = 2.780e-25
Identity = 50/75 (66.67%), Postives = 62/75 (82.67%), Query Frame = 0
Query:  209 SKLDVRVGVIVKAWEHPDSEKLFCEEIDLGEGKNRMIASGLRAAYTLEEMQGRRVTVLANLKARNLGGFKSEGMV 283
            SKLD+RVGVI KAW HP+++KLFCEEID+GE + R IASGLRA Y LE+++G+RV VL+NLK+R L  F S GMV
Sbjct:    6 SKLDIRVGVIQKAWVHPEADKLFCEEIDIGEDEPRQIASGLRAHYNLEDLEGQRVLVLSNLKSRKLVNFPSHGMV 80          
BLAST of mRNA_M-pyrifera_M_contig10179.378.1 vs. uniprot
Match: A0A7S2G580_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G580_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.500e-24
Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 0
Query:  200 PAARVEGHP--SKLDVRVGVIVKAWEHPDSEKLFCEEIDLGEGKNRMIASGLRAAYTLEEMQGRRVTVLANLKARNLGGFKSEGMV 283
            PAA     P  +KL++ VG I K WEHPDSEKLFCE ID+GEG++R IASGLRA Y L +++ R V VLANLK + LGGFKS GMV
Sbjct:   37 PAAEDPNAPPGAKLEIIVGKITKVWEHPDSEKLFCEHIDIGEGEDRQIASGLRAFYKLADLENRMVCVLANLKGKGLGGFKSTGMV 122          
BLAST of mRNA_M-pyrifera_M_contig10179.378.1 vs. uniprot
Match: A0A7R9ZR76_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZR76_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.050e-24
Identity = 52/75 (69.33%), Postives = 59/75 (78.67%), Query Frame = 0
Query:  209 SKLDVRVGVIVKAWEHPDSEKLFCEEIDLGEGKNRMIASGLRAAYTLEEMQGRRVTVLANLKARNLGGFKSEGMV 283
            S LD+RVG IVKAWEHP+S+KLFCEE+DLGE   R IASGLRA Y  E+++ RRV VL NLK RNL GF S GMV
Sbjct:   49 SALDIRVGKIVKAWEHPESDKLFCEEVDLGEDAPRQIASGLRAFYKKEDLENRRVVVLCNLKKRNLVGFPSHGMV 123          
BLAST of mRNA_M-pyrifera_M_contig10179.378.1 vs. uniprot
Match: A0A7S4ST89_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4ST89_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.700e-24
Identity = 52/79 (65.82%), Postives = 63/79 (79.75%), Query Frame = 0
Query:  205 EGHPSKLDVRVGVIVKAWEHPDSEKLFCEEIDLGEGKNRMIASGLRAAYTLEEMQGRRVTVLANLKARNLGGFKSEGMV 283
            E H  KLD+RVGVI KAW HP+++KL+CEEID+GE + R IASGLRA Y LE+++G+RV VLANLK R L GF S GMV
Sbjct:   73 EIHVDKLDMRVGVITKAWLHPEADKLYCEEIDIGEEEPRQIASGLRAYYNLEDLEGQRVLVLANLKTRKLVGFPSHGMV 151          
BLAST of mRNA_M-pyrifera_M_contig10179.378.1 vs. uniprot
Match: A0A7R9WA75_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WA75_9STRA)

HSP 1 Score: 106 bits (265), Expect = 3.090e-24
Identity = 55/76 (72.37%), Postives = 63/76 (82.89%), Query Frame = 0
Query:  209 SKLDVRVGVIVKAWEHPDSEKLFCEEIDLGE-GKNRMIASGLRAAYTLEEMQGRRVTVLANLKARNLGGFKSEGMV 283
            SKLD+RVGVI KAWEH +++KL+CEEID+GE G  R IASGLRA Y L E++GRRV VLANLKAR L GFKS GMV
Sbjct:   51 SKLDIRVGVINKAWEHEEADKLYCEEIDVGEEGGPRQIASGLRAHYDLGELEGRRVCVLANLKARKLVGFKSHGMV 126          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10179.378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS6_ECTSI1.250e-7558.67tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A835ZED8_9STRA2.090e-2844.41tRNA-binding domain-containing protein n=1 Tax=Tri... [more]
A0A7S0Y8C2_9STRA1.130e-2573.33Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S2W340_9STRA1.290e-2572.37Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2S818_9STRA1.320e-2573.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J9SYJ0_PHATR2.780e-2566.67Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A7S2G580_9STRA1.500e-2462.79Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7R9ZR76_9STRA2.050e-2469.33Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S4ST89_9STRA2.700e-2465.82Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7R9WA75_9STRA3.090e-2472.37Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 213..283
e-value: 7.5E-19
score: 67.6
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 207..283
score: 26.918
NoneNo IPR availableGENE3D2.40.50.140coord: 207..283
e-value: 2.4E-26
score: 94.5
NoneNo IPR availableGENE3D1.20.1050.130coord: 1..83
e-value: 5.7E-15
score: 57.5
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 16..283
IPR036282Glutathione S-transferase, C-terminal domain superfamilySUPERFAMILY47616GST C-terminal domain-likecoord: 1..74
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 208..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10179contigM-pyrifera_M_contig10179:7105..10634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10179.378.1mRNA_M-pyrifera_M_contig10179.378.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10179 7105..10634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10179.378.1 ID=prot_M-pyrifera_M_contig10179.378.1|Name=mRNA_M-pyrifera_M_contig10179.378.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=283bp
VDSWLDFATSFSSEGMDGVDRHLKGRSFLAGEAFSVADVAVYFACASTAA
AASAASAKKYLDFFRWFNQMQHRVRTMAPSCEVIPAAVPLDIFTPVLVPL
PPKRPSASVTATATMGDATSKGVSTPAKASGGGGTQAASAAAAGGGGSGK
KDKAKSKSKNKKKAGEEGTATAPAAGEKGGEGKEGAAGGAGAGAEAAAAP
AARVEGHPSKLDVRVGVIVKAWEHPDSEKLFCEEIDLGEGKNRMIASGLR
AAYTLEEMQGRRVTVLANLKARNLGGFKSEGMV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR036282Glutathione-S-Trfase_C_sf
IPR012340NA-bd_OB-fold