prot_M-pyrifera_M_contig101782.374.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101782.374.1
Unique Nameprot_M-pyrifera_M_contig101782.374.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length204
Homology
BLAST of mRNA_M-pyrifera_M_contig101782.374.1 vs. uniprot
Match: UPI001939CB68 (mutS protein homolog 4-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939CB68)

HSP 1 Score: 130 bits (326), Expect = 2.750e-31
Identity = 80/207 (38.65%), Postives = 115/207 (55.56%), Query Frame = 0
Query:    1 VARHYFNDTVGLDLLRTHGLREPPPASAR---NFLTLSAAAALIKYVEHAQSIVLANKCLQVVWEGEEGHVSLDAETVVSLELVANARTGDQKASLFGCINRTRTAVGARLLRATLLSPLNRVEELQARQTTVSALLDNETLFFSLQAALSRV-LDLDLVANHLVHRPRVCTPRTARQGVRAVIALKHCLAALPPLRTLLETEEDPL 203
            V RHYFN+  GLD ++   ++E           +  L+A AAL+KYVE  Q+ + AN  L +V++G E    +DA T  +LELV N +    + +LFG +N TRTA GAR+LR+ +L P N +E + +R   V  L D + LF+ L+A L R  +DLD + + LV  P+  T RTA   + + I LKH L  +P L   L      L
Sbjct:  306 VQRHYFNEGKGLDYIKQLCVKERNSVEMDVNGKYYCLAATAALVKYVEFIQNTLFANFSLSIVFKGSEQTTLVDASTASALELVINLKNPKSEETLFGVLNHTRTAGGARMLRSNILQPPNDLETITSRHDCVQELTDEKDLFYGLKACLDRFDVDLDHLLSSLVQIPKQETERTAENKITSCILLKHILQLVPALEETLTNARSEL 512          
BLAST of mRNA_M-pyrifera_M_contig101782.374.1 vs. uniprot
Match: A0A667XC79_9TELE (DNA mismatch repair protein n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667XC79_9TELE)

HSP 1 Score: 127 bits (320), Expect = 1.670e-30
Identity = 81/209 (38.76%), Postives = 123/209 (58.85%), Query Frame = 0
Query:    1 VARHYFNDTVGLDLLRTHGLREPPPASA-----RNFLTLSAAAALIKYVEHAQSIVLANKCLQVVWEGEEGHVSLDAETVVSLELVANARTGDQKASLFGCINRTRTAVGARLLRATLLSPLNRVEELQARQTTVSALLDNETLFFSLQAALSRVLDLDLVANHLVHRPRVCTPRTARQGVRAVIALKHCLAALPPLRTLLETEEDPLL 204
            + R YFN++ GLD ++   L  P  ++        +  L+AAAA++KY+E  Q+ V A K L+V ++G E    +D+ +V +LELV N R    + +LFG +N T+TA GAR LR+ +L PL  V+ +  R  T+  LL +E LFF L+ A+S  LD+D + + LV  P++ T + A   +  VI LKH L  +PPLR +L+     LL
Sbjct:  158 IQRKYFNESKGLDYIQQ--LCAPEFSTVLMEVQAKYYCLAAAAAVLKYLEFIQNSVYAPKSLKVSFKGSEQTAMIDSVSVTNLELVVNNRDHRSEHTLFGILNHTKTAGGARRLRSNILEPLLDVDTINIRLDTIHELLQDEELFFGLKNAISHFLDIDQLLSVLVQIPKLETVQVAEAKITHVIQLKHTLDLVPPLRMVLKNCSTALL 364          
BLAST of mRNA_M-pyrifera_M_contig101782.374.1 vs. uniprot
Match: A0A836CNW6_9STRA (Muts protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNW6_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.320e-30
Identity = 77/198 (38.89%), Postives = 113/198 (57.07%), Query Frame = 0
Query:    1 VARHYFNDTVGLDLLRTHGLREPPPASARNFLTLSAAAALIKYVEHAQSIVLANKCLQV-VWEGEEGHVSLDAETVVSLELVANARTGDQKASLFGCINRTRTAVGARLLRATLLSPLNRVEELQARQTTVSALLDNETLFFSLQAALSRVLDLDLVANHLVHRPRVCTPRTARQGVRAVIALKHCLAALPPLRTLLE 197
            V+R YF+   G +LLR    +         ++ L+A   L++YVE+      A   L+V +  G +G + +D  T + LEL+ NAR  DQ+ SLFG INRT+T+VGARLLR+ +LSP   +  L+AR   V+  L +E +F      LSR  DLD + + LV  P+  TP+TA +G+  VI L+H +  L P+   LE
Sbjct:  137 VSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLE 334          
BLAST of mRNA_M-pyrifera_M_contig101782.374.1 vs. uniprot
Match: A0A8K0ELV6_BRALA (MSH4 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0ELV6_BRALA)

HSP 1 Score: 127 bits (318), Expect = 3.220e-30
Identity = 78/206 (37.86%), Postives = 118/206 (57.28%), Query Frame = 0
Query:    1 VARHYFNDTVGLDLLRTHGLREPPPAS---ARNFLTLSAAAALIKYVEHAQSIVLANKCLQVVWEGEEGHVSLDAETVVSLELVANARTGDQKASLFGCINRTRTAVGARLLRATLLSPLNRVEELQARQTTVSALLDNETLFFSLQAALSRVLDLDLVANHLVHRPRVCTPRTARQGVRAVIALKHCLAALPPLRTLLETEEDPL 203
            V R YFN+T GL  +R   + E        A  + +L+  AAL+KYVE  Q++V A   L++++ G E    +DA T  +LEL+ N R    + +LFG +N T+TA GARL RA +L P   +E +  R   V+ L DNE LF++LQ+ +SR LD+D + +  V  P+  T +TA   +  +I LKH L  + PL+  L+  ++ L
Sbjct:  385 VQRKYFNETKGLQYVRQLCVPEFNSIEMEVASKYYSLACTAALLKYVEFIQNVVYAPNSLKILFRGSEQCTMIDASTARNLELLQNVRDPKSQHTLFGAMNYTKTAAGARLTRANILQPPCDLETISMRLDCVAELTDNEELFYNLQSVVSRFLDVDHLLSMCVQIPKQETVKTAESKITNIIYLKHTLELVEPLQAALKDCDNQL 590          
BLAST of mRNA_M-pyrifera_M_contig101782.374.1 vs. uniprot
Match: A0A6P4XSV4_BRABE (mutS protein homolog 4-like n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4XSV4_BRABE)

HSP 1 Score: 125 bits (315), Expect = 7.880e-30
Identity = 78/200 (39.00%), Postives = 115/200 (57.50%), Query Frame = 0
Query:    1 VARHYFNDTVGLDLLRTHGLREPPPAS---ARNFLTLSAAAALIKYVEHAQSIVLANKCLQVVWEGEEGHVSLDAETVVSLELVANARTGDQKASLFGCINRTRTAVGARLLRATLLSPLNRVEELQARQTTVSALLDNETLFFSLQAALSRVLDLDLVANHLVHRPRVCTPRTARQGVRAVIALKHCLAALPPLRTLLE 197
            V R YFN+T GL  +R   + E        A  + +L+  AAL+KYVE  Q++V A   L++++ G E    +DA T  +LEL+ N R    + +LFG +N T+TA GARL RA +L P   VE +  R   V+ L DNE LF++LQ+ +SR LD+D + +  V  P+  + +TA   +  VI LKH L  + PL+  L+
Sbjct:  208 VQRKYFNETKGLQYVRQLCVPEFNSIEMEVASKYYSLACTAALLKYVEFIQNVVYAPNSLKILFRGSEQCTMIDASTARNLELLQNTRDPKSQHTLFGAMNYTKTAAGARLTRANILQPPCDVETISMRLDCVAELTDNEELFYNLQSVVSRFLDVDHLLSVCVQIPKQESVKTAESKITNVIYLKHTLELVEPLQAALK 407          
BLAST of mRNA_M-pyrifera_M_contig101782.374.1 vs. uniprot
Match: UPI00106BE4DC (mutS protein homolog 4-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BE4DC)

HSP 1 Score: 124 bits (312), Expect = 1.980e-29
Identity = 76/206 (36.89%), Postives = 117/206 (56.80%), Query Frame = 0
Query:    1 VARHYFNDTVGLDLLRTHGLREPPPAS---ARNFLTLSAAAALIKYVEHAQSIVLANKCLQVVWEGEEGHVSLDAETVVSLELVANARTGDQKASLFGCINRTRTAVGARLLRATLLSPLNRVEELQARQTTVSALLDNETLFFSLQAALSRVLDLDLVANHLVHRPRVCTPRTARQGVRAVIALKHCLAALPPLRTLLETEEDPL 203
            V R YFN++ GL  ++   + E        +  +  L+ A+AL+KYVE  Q++V A   L++V++G E    +DA T  +LELV NAR       L+G +N T+TA GAR+LR+ +L P + V  +  R   V+ LL+ E  F++LQ+ L+R LD+D +    +  P+  T +TA   +  VI LKH L  + PLR  L+  E+ L
Sbjct:  190 VQRKYFNESQGLQYIKQLCVPEFNAVEMEVSSKYYCLATASALLKYVEFIQNLVYAPGSLRIVFKGSEQTTMIDASTARNLELVLNARNLGSDHCLYGVMNHTKTAAGARMLRSNILQPPSDVGTINTRLDCVTELLEKEEEFYTLQSVLARFLDVDHITTMCIQVPKTETVKTAESKITNVIYLKHTLELVDPLREALKNFENTL 395          
BLAST of mRNA_M-pyrifera_M_contig101782.374.1 vs. uniprot
Match: UPI00051B139A (mutS protein homolog 4-like n=1 Tax=Fulmarus glacialis TaxID=30455 RepID=UPI00051B139A)

HSP 1 Score: 122 bits (306), Expect = 7.020e-29
Identity = 79/207 (38.16%), Postives = 113/207 (54.59%), Query Frame = 0
Query:    1 VARHYFNDTVGLDLLRTHGLREPPPASAR---NFLTLSAAAALIKYVEHAQSIVLANKCLQVVWEGEEGHVSLDAETVVSLELVANARTGDQKASLFGCINRTRTAVGARLLRATLLSPLNRVEELQARQTTVSALLDNETLFFSLQAALSRVLDLDLVANHLVHRPRVCTPRTARQGVRAVIALKHCLAALPPLRTLLETEEDPLL 204
            V R YFN+T GL+ +      E           +  L+AAAAL+KYVE  Q+ V A K L+V ++G E    +D+ +  +LELV N R      +LFG +N T+T  G+R LR+ +L PL   E +  R   V  LL +E LFF LQA +S+ LD + + + LV  P+  T +TA   +  +I LKH L  + PL+  L +   PLL
Sbjct:  287 VQRKYFNETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNSVYAPKSLKVCFQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLFGVLNYTKTPGGSRRLRSNILEPLVDAETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNLIYLKHTLELVEPLKAALRSCNTPLL 493          
BLAST of mRNA_M-pyrifera_M_contig101782.374.1 vs. uniprot
Match: K1PAT4_CRAGI (MutS-like protein 4 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1PAT4_CRAGI)

HSP 1 Score: 122 bits (306), Expect = 1.290e-28
Identity = 76/207 (36.71%), Postives = 113/207 (54.59%), Query Frame = 0
Query:    1 VARHYFNDTVGLDLLR---THGLREPPPASARNFLTLSAAAALIKYVEHAQSIVLANKCLQVVWEGEEGHVSLDAETVVSLELVANARTGDQKASLFGCINRTRTAVGARLLRATLLSPLNRVEELQARQTTVSALLDNETLFFSLQAALSRVLDLDLVANHLVHRPRVCTPRTARQGVRAVIALKHCLAALPPLRTLLETEEDPLL 204
            V R YFN+T GL  ++                 +  L+AAAALIKYVE  Q+++LA   + V++ G E    +DA T V+LEL+ N R    + +L+G +N T+T  GARLLRA +L P   +  +  RQ  VS L + E +F ++   ++R LD+D V +  V  P+  T +TA   +  +I LKH L  + PLR  L   E+ L+
Sbjct:  354 VQRKYFNETKGLQFVKQLCVSDFNSVVMELTTKYYCLAAAAALIKYVEFTQNMILAPASINVIFSGCENTTMIDATTAVNLELLQNIRDPKSEHTLYGVLNYTKTIGGARLLRANILQPPCDLGTITMRQEVVSELTEKEDVFDNIHTVIARFLDIDHVLSMCVQIPKQETLKTAEANINNIIYLKHILELVDPLRNALSNCENRLM 560          
BLAST of mRNA_M-pyrifera_M_contig101782.374.1 vs. uniprot
Match: A0A7K5XBW2_9CHAR (MSH4 protein (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7K5XBW2_9CHAR)

HSP 1 Score: 120 bits (300), Expect = 1.480e-28
Identity = 78/207 (37.68%), Postives = 112/207 (54.11%), Query Frame = 0
Query:    1 VARHYFNDTVGLDLLRTHGLREPPPASAR---NFLTLSAAAALIKYVEHAQSIVLANKCLQVVWEGEEGHVSLDAETVVSLELVANARTGDQKASLFGCINRTRTAVGARLLRATLLSPLNRVEELQARQTTVSALLDNETLFFSLQAALSRVLDLDLVANHLVHRPRVCTPRTARQGVRAVIALKHCLAALPPLRTLLETEEDPLL 204
            V R YFN+T GL+ +      E           +  L+AAAAL+KYVE  Q+ V A K L+V ++G E    +D+ +  +LELV N R      +LFG +N T+T  G+R LR+ +L PL   E +  R   V  LL +E LFF LQA +S+ LD + + + LV  P+  T + A   +  +I LKH L  + PL+  L +   PLL
Sbjct:  153 VQRKYFNETKGLEYIEQLCASEFSTVFMEVQSKYYCLAAAAALLKYVEFIQNSVYAPKSLKVRFQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLFGVLNYTKTPGGSRRLRSNILEPLVDAETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKAAESKITNLIYLKHTLELVEPLKAALRSCNTPLL 359          
BLAST of mRNA_M-pyrifera_M_contig101782.374.1 vs. uniprot
Match: A0A0A0AD33_CHAVO (MutS protein 4 (Fragment) n=2 Tax=Charadrius vociferus TaxID=50402 RepID=A0A0A0AD33_CHAVO)

HSP 1 Score: 122 bits (305), Expect = 1.700e-28
Identity = 79/207 (38.16%), Postives = 113/207 (54.59%), Query Frame = 0
Query:    1 VARHYFNDTVGLDLLRTHGLREPPPASAR---NFLTLSAAAALIKYVEHAQSIVLANKCLQVVWEGEEGHVSLDAETVVSLELVANARTGDQKASLFGCINRTRTAVGARLLRATLLSPLNRVEELQARQTTVSALLDNETLFFSLQAALSRVLDLDLVANHLVHRPRVCTPRTARQGVRAVIALKHCLAALPPLRTLLETEEDPLL 204
            V R YFN+T GL+ +      E           +  L+AAAAL+KYVE  Q+ V A K L+V ++G E    +D+ +  +LELV N R      +LFG +N T+T  G+R LR+ +L PL   E +  R   V  LL +E LFF LQA +S+ LD + + + LV  P+  T +TA   +  +I LKH L  + PL+  L +   PLL
Sbjct:  153 VQRKYFNETKGLEYIEQLCASEFSTVFMEVQSKYYCLAAAAALLKYVEFIQNSVYAPKSLKVRFQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLFGVLNYTKTPGGSRRLRSNILEPLVDAETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNLIYLKHTLELVEPLKAALRSCNTPLL 359          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101782.374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001939CB682.750e-3138.65mutS protein homolog 4-like n=1 Tax=Styela clava T... [more]
A0A667XC79_9TELE1.670e-3038.76DNA mismatch repair protein n=2 Tax=Myripristis mu... [more]
A0A836CNW6_9STRA2.320e-3038.89Muts protein 4 n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A8K0ELV6_BRALA3.220e-3037.86MSH4 protein n=1 Tax=Branchiostoma lanceolatum Tax... [more]
A0A6P4XSV4_BRABE7.880e-3039.00mutS protein homolog 4-like n=2 Tax=Branchiostoma ... [more]
UPI00106BE4DC1.980e-2936.89mutS protein homolog 4-like n=1 Tax=Dendronephthya... [more]
UPI00051B139A7.020e-2938.16mutS protein homolog 4-like n=1 Tax=Fulmarus glaci... [more]
K1PAT4_CRAGI1.290e-2836.71MutS-like protein 4 n=3 Tax=Crassostrea gigas TaxI... [more]
A0A7K5XBW2_9CHAR1.480e-2837.68MSH4 protein (Fragment) n=3 Tax=Neognathae TaxID=8... [more]
A0A0A0AD33_CHAVO1.700e-2838.16MutS protein 4 (Fragment) n=2 Tax=Charadrius vocif... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1420.10coord: 67..203
e-value: 6.4E-30
score: 106.9
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 3..199
NoneNo IPR availablePANTHERPTHR11361:SF21MUTS PROTEIN HOMOLOG 4coord: 3..199
IPR007696DNA mismatch repair protein MutS, corePFAMPF05192MutS_IIIcoord: 74..198
e-value: 9.0E-21
score: 75.0
IPR036187DNA mismatch repair protein MutS, core domain superfamilySUPERFAMILY48334DNA repair protein MutS, domain IIIcoord: 71..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101782contigM-pyrifera_M_contig101782:21..632 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101782.374.1mRNA_M-pyrifera_M_contig101782.374.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101782 21..632 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101782.374.1 ID=prot_M-pyrifera_M_contig101782.374.1|Name=mRNA_M-pyrifera_M_contig101782.374.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp
VARHYFNDTVGLDLLRTHGLREPPPASARNFLTLSAAAALIKYVEHAQSI
VLANKCLQVVWEGEEGHVSLDAETVVSLELVANARTGDQKASLFGCINRT
RTAVGARLLRATLLSPLNRVEELQARQTTVSALLDNETLFFSLQAALSRV
LDLDLVANHLVHRPRVCTPRTARQGVRAVIALKHCLAALPPLRTLLETEE
DPLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007696DNA_mismatch_repair_MutS_core
IPR036187DNA_mismatch_repair_MutS_sf