prot_M-pyrifera_M_contig101769.371.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101769.371.1
Unique Nameprot_M-pyrifera_M_contig101769.371.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length110
Homology
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BLAST of mRNA_M-pyrifera_M_contig101769.371.1 vs. uniprot
Match: A0A399Z591_9CHLR (Uncharacterized protein n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A399Z591_9CHLR)

HSP 1 Score: 51.6 bits (122), Expect = 2.650e-5
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 0 
Query:    1 ASSGLGGAIGFEDDTTTEYSSLTVTNSRFLRNSAGSS----GGAIYSTGTILTVTDCFFAGNNGTDGGAVT--ASPYLNSAAAYIMDSNIFVGNYAASRGGAVWLAT 101
            A++  GGAI  E  + T    LTVTN+RF+ N+A       GGAIYS G ++T+   +F GN+ + GGA+   ASP++   AA I   +    +   S GGAV +A+
Sbjct:  117 ANNDKGGAIHVESSSAT----LTVTNARFMDNTASDPDNGYGGAIYSNG-VMTLEKIYFVGNSASRGGALASNASPFIAGHAAVIKTVDFKNNHVTTSNGGAVHVAS 218
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101769.371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A399Z591_9CHLR2.650e-539.25Uncharacterized protein n=2 Tax=Chloroflexi bacter... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 29..47
e-value: 2.2E-6
score: 25.3
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 19..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101769contigM-pyrifera_M_contig101769:324..653 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101769.371.1mRNA_M-pyrifera_M_contig101769.371.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101769 324..653 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101769.371.1 ID=prot_M-pyrifera_M_contig101769.371.1|Name=mRNA_M-pyrifera_M_contig101769.371.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp
ASSGLGGAIGFEDDTTTEYSSLTVTNSRFLRNSAGSSGGAIYSTGTILTV
TDCFFAGNNGTDGGAVTASPYLNSAAAYIMDSNIFVGNYAASRGGAVWLA
TNSQPNSLSN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence