prot_M-pyrifera_M_contig101768.370.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101768.370.1
Unique Nameprot_M-pyrifera_M_contig101768.370.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length83
Homology
BLAST of mRNA_M-pyrifera_M_contig101768.370.1 vs. uniprot
Match: A0A1S8VYS4_9FUNG (60S ribosomal protein L27 n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VYS4_9FUNG)

HSP 1 Score: 132 bits (331), Expect = 6.700e-38
Identity = 63/82 (76.83%), Postives = 76/82 (92.68%), Query Frame = 0
Query:    1 RSLKQGRVVIVTQGRYAGRKAVIVKNFDDGTDARPYGHAVVAGVDKYPLKITKSMSKKKVAKRSKVKPFVKVVNYNHLMPTR 82
            R LK G+VV+V QGRYAG+KAVIVKNFD+GT  RPY HA+VAGV++YPLK+T+SM++KKVAKRSKVKPFVKVVN+NH+MPTR
Sbjct:    3 RFLKTGKVVLVLQGRYAGKKAVIVKNFDEGTKERPYPHALVAGVERYPLKVTRSMNQKKVAKRSKVKPFVKVVNFNHMMPTR 84          
BLAST of mRNA_M-pyrifera_M_contig101768.370.1 vs. uniprot
Match: A0A0L0H975_SPIPD (60S ribosomal protein L27 n=2 Tax=Spizellomycetales TaxID=34478 RepID=A0A0L0H975_SPIPD)

HSP 1 Score: 130 bits (328), Expect = 1.860e-37
Identity = 61/80 (76.25%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    3 LKQGRVVIVTQGRYAGRKAVIVKNFDDGTDARPYGHAVVAGVDKYPLKITKSMSKKKVAKRSKVKPFVKVVNYNHLMPTR 82
            LK G+VV+V QGRYAG+KAVIVKNFD+GT  RPY HA+VAG+++YPLK+TK M +K+VAKRS+VKPFVKVVNYNHLMPTR
Sbjct:    4 LKTGKVVLVLQGRYAGKKAVIVKNFDEGTKERPYPHAIVAGIERYPLKVTKGMGQKRVAKRSRVKPFVKVVNYNHLMPTR 83          
BLAST of mRNA_M-pyrifera_M_contig101768.370.1 vs. uniprot
Match: A0A1Y1YIZ3_9FUNG (60S ribosomal protein L27 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YIZ3_9FUNG)

HSP 1 Score: 130 bits (326), Expect = 3.860e-37
Identity = 57/80 (71.25%), Postives = 72/80 (90.00%), Query Frame = 0
Query:    3 LKQGRVVIVTQGRYAGRKAVIVKNFDDGTDARPYGHAVVAGVDKYPLKITKSMSKKKVAKRSKVKPFVKVVNYNHLMPTR 82
            +K G+V I+ QGRYAG+K V++KNFD+GT  RPYGHA+VAGV++YPLK+ KSM KK+++KRSKVKPFVKVVNYNH+MPTR
Sbjct:    4 IKPGKVAIILQGRYAGKKVVVIKNFDEGTKERPYGHAIVAGVERYPLKVNKSMGKKRISKRSKVKPFVKVVNYNHIMPTR 83          
BLAST of mRNA_M-pyrifera_M_contig101768.370.1 vs. uniprot
Match: T2MEU9_HYDVU (60S ribosomal protein L27 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2MEU9_HYDVU)

HSP 1 Score: 130 bits (326), Expect = 3.980e-37
Identity = 59/80 (73.75%), Postives = 71/80 (88.75%), Query Frame = 0
Query:    3 LKQGRVVIVTQGRYAGRKAVIVKNFDDGTDARPYGHAVVAGVDKYPLKITKSMSKKKVAKRSKVKPFVKVVNYNHLMPTR 82
            +K G+VV+V  GRYAGRKA+IVKN+DDGT  RPYGHA+VAG+DKYPL++TK M KKKV KRSK+K F+KV+NYNHLMPTR
Sbjct:    5 MKAGKVVLVLGGRYAGRKAIIVKNYDDGTQDRPYGHALVAGIDKYPLRVTKPMGKKKVTKRSKIKSFIKVINYNHLMPTR 84          
BLAST of mRNA_M-pyrifera_M_contig101768.370.1 vs. uniprot
Match: L8GLJ9_ACACA (60S ribosomal protein L27 (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GLJ9_ACACA)

HSP 1 Score: 129 bits (325), Expect = 5.010e-37
Identity = 63/80 (78.75%), Postives = 71/80 (88.75%), Query Frame = 0
Query:    3 LKQGRVVIVTQGRYAGRKAVIVKNFDDGTDARPYGHAVVAGVDKYPLKITKSMSKKKVAKRSKVKPFVKVVNYNHLMPTR 82
            LK G+VVIV  GRYAGRKAVIV+N DDGT ARPYG+AVVAGVDKYP KITKSM KKK+AK++K+ PFVK +NYNHLMPTR
Sbjct:    1 LKPGKVVIVLNGRYAGRKAVIVENRDDGTKARPYGYAVVAGVDKYPKKITKSMGKKKIAKKTKIAPFVKAINYNHLMPTR 80          
BLAST of mRNA_M-pyrifera_M_contig101768.370.1 vs. uniprot
Match: A0A1Y1WM81_9FUNG (60S ribosomal protein L27 n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WM81_9FUNG)

HSP 1 Score: 129 bits (325), Expect = 5.650e-37
Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 0
Query:    3 LKQGRVVIVTQGRYAGRKAVIVKNFDDGTDARPYGHAVVAGVDKYPLKITKSMSKKKVAKRSKVKPFVKVVNYNHLMPTR 82
            LK G+VVI+ QGRYAG+KAVIVKN D+GT  RPYGHA+VAG+++YPLK+TKSM KKKVA RS VKPF+KVVNY HLMPTR
Sbjct:    5 LKNGKVVIILQGRYAGKKAVIVKNVDEGTKERPYGHAIVAGIERYPLKVTKSMDKKKVASRSHVKPFIKVVNYAHLMPTR 84          
BLAST of mRNA_M-pyrifera_M_contig101768.370.1 vs. uniprot
Match: A0A1Y2CHK6_9FUNG (60S ribosomal protein L27 n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CHK6_9FUNG)

HSP 1 Score: 128 bits (322), Expect = 1.200e-36
Identity = 58/80 (72.50%), Postives = 72/80 (90.00%), Query Frame = 0
Query:    3 LKQGRVVIVTQGRYAGRKAVIVKNFDDGTDARPYGHAVVAGVDKYPLKITKSMSKKKVAKRSKVKPFVKVVNYNHLMPTR 82
            LK G+VV+V  GRYAGRKAVIVKNFD+GT ++PY HAV+AG+++YPLKITK M +KK+AKRSKVKPF+K VNYNH++PTR
Sbjct:    5 LKSGKVVLVLSGRYAGRKAVIVKNFDEGTGSKPYPHAVIAGIERYPLKITKGMGQKKIAKRSKVKPFIKTVNYNHILPTR 84          
BLAST of mRNA_M-pyrifera_M_contig101768.370.1 vs. uniprot
Match: F4P906_BATDJ (60S ribosomal protein L27 n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4P906_BATDJ)

HSP 1 Score: 128 bits (321), Expect = 2.230e-36
Identity = 58/82 (70.73%), Postives = 74/82 (90.24%), Query Frame = 0
Query:    1 RSLKQGRVVIVTQGRYAGRKAVIVKNFDDGTDARPYGHAVVAGVDKYPLKITKSMSKKKVAKRSKVKPFVKVVNYNHLMPTR 82
            R LK G+VV+V QGRYAG+KAVIVKNFD+GT  RPY HA++ GV++YPL+IT SMS+KKVA+RSK+KPF+KV+N+NH+MPTR
Sbjct:    3 RFLKPGKVVLVLQGRYAGKKAVIVKNFDEGTKERPYPHAIITGVERYPLRITSSMSQKKVARRSKIKPFIKVINFNHMMPTR 84          
BLAST of mRNA_M-pyrifera_M_contig101768.370.1 vs. uniprot
Match: A0A388M8N0_CHABU (60S ribosomal protein L27 n=2 Tax=Chara TaxID=13778 RepID=A0A388M8N0_CHABU)

HSP 1 Score: 127 bits (320), Expect = 3.160e-36
Identity = 58/80 (72.50%), Postives = 71/80 (88.75%), Query Frame = 0
Query:    3 LKQGRVVIVTQGRYAGRKAVIVKNFDDGTDARPYGHAVVAGVDKYPLKITKSMSKKKVAKRSKVKPFVKVVNYNHLMPTR 82
            LKQ +VV++  GRYAG KAVIVKNFDDGT  RPYGHA+VAG+ KYP K+TK +SKKK+AKR+++KPFVKV+NYNH+MPTR
Sbjct:    5 LKQNKVVVLLNGRYAGHKAVIVKNFDDGTSGRPYGHALVAGIAKYPRKVTKKLSKKKLAKRARLKPFVKVINYNHIMPTR 84          
BLAST of mRNA_M-pyrifera_M_contig101768.370.1 vs. uniprot
Match: A0A367KY20_RHIST (60S ribosomal protein L27 n=38 Tax=Opisthokonta TaxID=33154 RepID=A0A367KY20_RHIST)

HSP 1 Score: 127 bits (320), Expect = 3.260e-36
Identity = 59/80 (73.75%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    3 LKQGRVVIVTQGRYAGRKAVIVKNFDDGTDARPYGHAVVAGVDKYPLKITKSMSKKKVAKRSKVKPFVKVVNYNHLMPTR 82
            +K G+VV++ QGRYAG+KAV+V+N D+GT  RPYG+AVVAGV++ PLK+TKSM KKKVAKRSKVKPFVK+VNYNH+MPTR
Sbjct:    5 IKAGKVVVILQGRYAGKKAVVVRNHDEGTKDRPYGYAVVAGVERSPLKVTKSMGKKKVAKRSKVKPFVKIVNYNHMMPTR 84          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101768.370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1S8VYS4_9FUNG6.700e-3876.8360S ribosomal protein L27 n=1 Tax=Batrachochytrium... [more]
A0A0L0H975_SPIPD1.860e-3776.2560S ribosomal protein L27 n=2 Tax=Spizellomycetale... [more]
A0A1Y1YIZ3_9FUNG3.860e-3771.2560S ribosomal protein L27 n=1 Tax=Basidiobolus mer... [more]
T2MEU9_HYDVU3.980e-3773.7560S ribosomal protein L27 n=1 Tax=Hydra vulgaris T... [more]
L8GLJ9_ACACA5.010e-3778.7560S ribosomal protein L27 (Fragment) n=1 Tax=Acant... [more]
A0A1Y1WM81_9FUNG5.650e-3776.2560S ribosomal protein L27 n=1 Tax=Linderina pennis... [more]
A0A1Y2CHK6_9FUNG1.200e-3672.5060S ribosomal protein L27 n=1 Tax=Rhizoclosmatium ... [more]
F4P906_BATDJ2.230e-3670.7360S ribosomal protein L27 n=2 Tax=Batrachochytrium... [more]
A0A388M8N0_CHABU3.160e-3672.5060S ribosomal protein L27 n=2 Tax=Chara TaxID=1377... [more]
A0A367KY20_RHIST3.260e-3673.7560S ribosomal protein L27 n=38 Tax=Opisthokonta Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 2..29
e-value: 0.0054
score: 26.0
IPR005824KOWPFAMPF00467KOWcoord: 6..33
e-value: 6.5E-6
score: 25.9
IPR038655Ribosomal protein L27e superfamilyGENE3D2.30.30.770coord: 1..82
e-value: 1.8E-44
score: 153.2
IPR001141Ribosomal protein L27ePFAMPF01777Ribosomal_L27ecoord: 50..82
e-value: 2.9E-15
score: 56.4
IPR001141Ribosomal protein L27ePANTHERPTHR1049760S RIBOSOMAL PROTEIN L27coord: 3..82
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101768contigM-pyrifera_M_contig101768:139..387 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101768.370.1mRNA_M-pyrifera_M_contig101768.370.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101768 139..387 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101768.370.1 ID=prot_M-pyrifera_M_contig101768.370.1|Name=mRNA_M-pyrifera_M_contig101768.370.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=83bp
RSLKQGRVVIVTQGRYAGRKAVIVKNFDDGTDARPYGHAVVAGVDKYPLK
ITKSMSKKKVAKRSKVKPFVKVVNYNHLMPTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005824KOW
IPR038655L27e_sf
IPR001141Ribosomal_L27e
IPR008991Translation_prot_SH3-like_sf