prot_M-pyrifera_M_contig101765.368.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101765.368.1
Unique Nameprot_M-pyrifera_M_contig101765.368.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length73
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101765.368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008936Rho GTPase activation proteinGENE3D1.10.555.10coord: 1..72
e-value: 3.9E-11
score: 44.6
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 4..62
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 4..63
e-value: 5.4E-11
score: 42.5
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 1..73
score: 12.414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101765contigM-pyrifera_M_contig101765:9..227 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101765.368.1mRNA_M-pyrifera_M_contig101765.368.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101765 9..227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101765.368.1 ID=prot_M-pyrifera_M_contig101765.368.1|Name=mRNA_M-pyrifera_M_contig101765.368.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp
EGSDEGTTALVELLKKEPEGRLACFHHIVALLLDIKDNAAATQMDAQNLA
IVWAPNFLWVPEEDGPRKPSLSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008936Rho_GTPase_activation_prot
IPR000198RhoGAP_dom