prot_M-pyrifera_M_contig101755.362.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101755.362.1
Unique Nameprot_M-pyrifera_M_contig101755.362.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length120
Homology
BLAST of mRNA_M-pyrifera_M_contig101755.362.1 vs. uniprot
Match: UPI00083568F9 (thioesterase family protein n=1 Tax=Actinomadura hibisca TaxID=68565 RepID=UPI00083568F9)

HSP 1 Score: 52.4 bits (124), Expect = 1.650e-5
Identity = 42/106 (39.62%), Postives = 57/106 (53.77%), Query Frame = 0
Query:    1 DRTPAATAEGPIAFTANLPESWQSLRGVHGG---FATALATASIAAVEPERHIRTVHAAFLRPTTVGPVDIVVTTMRRGRTLSTHRASMRQAGIDVLEVVVTLCEP 103
            D   A TA+G    TA + E W ++ G   G   FA ALA A  AA E +R + T  A FLRP  VGP +I V  ++RGR  ST  A++ Q G + + V+    +P
Sbjct:   10 DTAVARTADG--LRTAEIREGWSTIGGAPNGGYLFAVALAAAGEAA-EGQRPL-TATAHFLRPGVVGPAEIEVEPVKRGRVTSTVSAALSQEGKERVRVLAMYGDP 111          
BLAST of mRNA_M-pyrifera_M_contig101755.362.1 vs. uniprot
Match: K5BCV0_MYCHD (Acyl-CoA thioesterase 2 n=1 Tax=Mycolicibacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849) TaxID=1122247 RepID=K5BCV0_MYCHD)

HSP 1 Score: 51.2 bits (121), Expect = 4.760e-5
Identity = 36/83 (43.37%), Postives = 47/83 (56.63%), Query Frame = 0
Query:   28 VHGGFATALATASIAAVEPERHIRTVHAAFLR--PTTVGPVDIVVTTMRRGRTLSTHRASMRQAGIDVLEVVVTLCEPTDGPD 108
            + GG   A A  + AA  PE     +HA F+R    TV PVD++V   R GRT+ST R  ++QAG  VL  +V+  EP  GPD
Sbjct:   58 IFGGQLLAQAMTAAAATVPEHRPSGIHALFVRGGDETV-PVDLIVERTRDGRTMSTRRVGVQQAGRTVLTAMVSFAEP--GPD 137          
BLAST of mRNA_M-pyrifera_M_contig101755.362.1 vs. uniprot
Match: A0A1M3NA94_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3NA94_9DELT)

HSP 1 Score: 50.8 bits (120), Expect = 5.900e-5
Identity = 30/92 (32.61%), Postives = 47/92 (51.09%), Query Frame = 0
Query:   14 FTANLPESWQSLRGVHGGFATALATASIAAVEPERH--IRTVHAAFLRPTTVGPVDIVVTTMRRGRTLSTHRASMRQAGIDVLEVVVTLCEP 103
            ++ ++P+ WQ  +G  GG    L T +I   E +R   +R++ A    P   GPV+I VT+MRRG ++S   A + Q    V     +L  P
Sbjct:   23 YSGDIPDLWQQGKGAFGGVTVGLLTRAIVLAEADRGRTLRSLSAELCAPALPGPVEIAVTSMRRGGSMSFVEARLTQGDALVAHASASLAAP 114          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101755.362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI00083568F91.650e-539.62thioesterase family protein n=1 Tax=Actinomadura h... [more]
K5BCV0_MYCHD4.760e-543.37Acyl-CoA thioesterase 2 n=1 Tax=Mycolicibacterium ... [more]
A0A1M3NA94_9DELT5.900e-532.61Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042171Acyl-CoA thioesterase, double hotdog domainGENE3D3.10.129.90coord: 1..120
e-value: 1.3E-23
score: 86.2
NoneNo IPR availablePFAMPF136224HBT_3coord: 19..117
e-value: 1.0E-16
score: 62.0
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 18..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101755contigM-pyrifera_M_contig101755:5..364 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101755.362.1mRNA_M-pyrifera_M_contig101755.362.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101755 5..364 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101755.362.1 ID=prot_M-pyrifera_M_contig101755.362.1|Name=mRNA_M-pyrifera_M_contig101755.362.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
DRTPAATAEGPIAFTANLPESWQSLRGVHGGFATALATASIAAVEPERHI
RTVHAAFLRPTTVGPVDIVVTTMRRGRTLSTHRASMRQAGIDVLEVVVTL
CEPTDGPDWTTTHLPRPSPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042171Acyl-CoA_hotdog
IPR029069HotDog_dom_sf