prot_M-pyrifera_M_contig10003.11.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10003.11.1
Unique Nameprot_M-pyrifera_M_contig10003.11.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length392
Homology
BLAST of mRNA_M-pyrifera_M_contig10003.11.1 vs. uniprot
Match: A0A6H5JHB7_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHB7_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 3.410e-136
Identity = 262/407 (64.37%), Postives = 282/407 (69.29%), Query Frame = 0
Query:    1 QVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSTHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRITTEEDPAPLKEALVELGVESFESGGEGGAAGGFGSGGQSLDFLVDPGMYRNVEEAVRTVADGRCSLEVLQLSVQQEGEADMDVELLRKGLLAVKLKGEEEIRGKKARSGKSNDSEGVAEE----------------GLMMPAAGKRGKAKARIGRDSDYDNNDGRAGAAQQGGAVRARGEGMGAGESGVGKRGGRKSKGTRRREKEDAAERDARQQEVQERQEKRDQARAERQAAAGEREGESAARRDTDEDPAAAGAGV--KAKKALGCNTCVLTFPHTGAHREHYKSDLHRYNLKLKMKSVAPVSEEEFRLVDAEDFFHSDL 389
            QVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFS HPTRSAKQQALEVIKKLKEVMPIDRAKMKLRI+T+ED  PLKEAL ELGV+SFE+GG  GAA G  S G+ LDFLVDPG+YR+VEEAVRT A GRC+LEVLQLSVQQEGEADMDVEL+RK LLAVKLKGEE                                     GL+MPAAG+RGK   R G   DY N+              ARG        GVGKRGG            +AAERD RQQE Q+RQ    QA+AER A   E  G +A   + D+D    G G   KAK+ LGCNTC LTFP TGAHREHYKSDLHRYNLKLKMK   PVSEEEFRLVDA DFFHSD+
Sbjct:   96 QVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRISTDEDSTPLKEALGELGVDSFENGG--GAAAG--SSGEVLDFLVDPGLYRDVEEAVRTAAGGRCALEVLQLSVQQEGEADMDVELMRKELLAVKLKGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLIMPAAGRRGKG--RPGFSDDY-NDXXXXXXXXXXXXXXARGXXXXXXXGGVGKRGGXXXXXXXXXXXXEAAERDIRQQEAQQRQXXXXQAKAERLA---EGAGRAAGATERDQDAREQGGGDVGKAKRPLGCNTCGLTFPDTGAHREHYKSDLHRYNLKLKMKGGTPVSEEEFRLVDANDFFHSDI 492          
BLAST of mRNA_M-pyrifera_M_contig10003.11.1 vs. uniprot
Match: A0A835Z759_9STRA (SBDS protein C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z759_9STRA)

HSP 1 Score: 185 bits (470), Expect = 9.960e-51
Identity = 108/179 (60.34%), Postives = 126/179 (70.39%), Query Frame = 0
Query:    1 QVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSTHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRITTEEDPAPLKEA-LVELGVESFESGGEGGAAGGFGSGGQSLDFLVDPGMYRNVEEAVRTVADGRCSLEVLQLSVQQEGEADMDVELLRKGLLAVKL 178
            QVSDKER+   ES FRDVATIVSEKCVNP SNRPYTVSMIE AMRDVHF+  P +SAK QALE+I +LKEVMPI RA M LR+T     A   EA L  LGV  FE      A         S+D LVDPG++R +EEA+R    G   +EVLQLSVQQEGEAD+D+E  RKG+LA+++
Sbjct:   96 QVSDKERRAQYESAFRDVATIVSEKCVNPHSNRPYTVSMIENAMRDVHFAVAPNKSAKAQALELIPRLKEVMPIARASMLLRVTAPAALAQSVEASLSALGVTHFEKQTRTEAE-------HSVDVLVDPGLFRGIEEALRGSGGGAARVEVLQLSVQQEGEADIDLEAARKGVLALQV 267          
BLAST of mRNA_M-pyrifera_M_contig10003.11.1 vs. uniprot
Match: A0A4D9CZ78_9STRA (C2H2-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ78_9STRA)

HSP 1 Score: 176 bits (447), Expect = 2.810e-47
Identity = 149/441 (33.79%), Postives = 207/441 (46.94%), Query Frame = 0
Query:    3 SDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSTHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRIT--TEEDPAPLKEALVELGVE--SFESGGEGGAAGGFGSGGQSLDFLVDPGMYRNVEEAVRTVADGRCSLEVLQLSVQQEGEADMDVELLRKGLLAVKLKGE----------EEIRGKKARSGKSNDSEGVAEEGLMMPAAGKRGKAKARIGRDSDYDNNDGRAGAAQQGGAVRARGEGMGAGESGVGKRGGRKSKGTRRRE---------------------------------------KEDAAERDARQQEVQERQEKRDQARAERQAAAGEREGESAARRDTDEDPAAAGAGVKAKKA---LGCNTCVLTFPHTGAHREHYKSDLHRYNLKLKMKSVAPVSEEEFRLVDAEDFFHS 387
            SDKER+   ES++RD+ATIV+ K VNP SNRPYTV+MI   M+D+HF+ +PTR AKQQALEVI++L++VMP++RAKM+L++   T ED A + E +   G++  + E+ G+           + +D LVDPG++R V+E VR    G+ +L VL+LSVQQEGEAD+D+E+ RK  +  + + E          EE R ++ R  K  D EG A  G +  A       KA    DS  +                         E  V K+G  KS+G+++                                         K   +ER                                             G+  KA+     L CNTC + F     +REHY++D HRYNLKLK K   PVSE EF LVDA++ F S
Sbjct:   98 SDKEREAMHESLYRDIATIVAIKSVNPTSNRPYTVNMILSGMKDIHFAVNPTRGAKQQALEVIRRLQDVMPLERAKMRLKVVCPTTEDLAQVVEGMASFGIDGNTVEATGKK----------EEVDLLVDPGLFRRVDELVR--GKGKGALHVLELSVQQEGEADVDLEIARKAAMRKEQRDESAVANTFKAFEEAREREGR--KETDQEGEA--GFLRGA-----NVKAHGNEDSVVEGA-----------------------EEHVDKQG-TKSRGSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGGSER---------------------------------------------GSWEKARPGSNRLACNTCHVDFQDAKEYREHYRTDWHRYNLKLKEKGGGPVSEAEFELVDADEMFCS 448          
BLAST of mRNA_M-pyrifera_M_contig10003.11.1 vs. uniprot
Match: UPI00158EA940 (ribosome maturation protein SBDS n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158EA940)

HSP 1 Score: 151 bits (381), Expect = 1.060e-39
Identity = 83/162 (51.23%), Postives = 111/162 (68.52%), Query Frame = 0
Query:    1 QVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSTHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRITTEEDPAP-LKEALVELGVESFESGGEGGAAGGFGSGGQSLDFLVDPGMYRNVEEAVRTVADGRCSLEVLQLSVQQEGE 161
            QVSDKER  AL+S+F+D+ATIVSEKCVNP S RPY VSMIEKAM+D+HFS  P R++KQQALE+I +LK V+P++RA+MK+RI      A  LKE +V+L  +      +GG  G       S+D L+DPG YR ++E +R    G+  +E++ L    EGE
Sbjct:   95 QVSDKERHSALDSMFKDIATIVSEKCVNPESKRPYPVSMIEKAMKDIHFSVKPNRNSKQQALEIIPQLKAVIPLERAQMKIRIVYSNKTAKKLKEKIVKLVTKIENECWDGGNLG-------SIDCLIDPGKYREIDELIRAETRGQGMVELMSLKEITEGE 249          
BLAST of mRNA_M-pyrifera_M_contig10003.11.1 vs. uniprot
Match: T1HFI4_RHOPR (Ribosome maturation protein SBDS (Fragment) n=5 Tax=Triatominae TaxID=70999 RepID=T1HFI4_RHOPR)

HSP 1 Score: 145 bits (367), Expect = 1.220e-37
Identity = 83/166 (50.00%), Postives = 109/166 (65.66%), Query Frame = 0
Query:    1 QVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSTHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRITTE-EDPAPLKEALVELGV----ESFESGGEGGAAGGFGSGGQSLDFLVDPGMYRNVEEAVRTVADGRCSLEVLQLSVQQEGE 161
            QVSDKERQ  L+S+F+D+AT V++KCVNP + RPY VSMIEKAMRD+HFS  P R+AKQQ LEVI +LK VMP+DRA+M+LR+    ++   L+E L  L      E+++SGGE             +  L+DPG YR V+E + +V      LE+LQL    EGE
Sbjct:   96 QVSDKERQNQLDSLFKDIATNVADKCVNPETKRPYPVSMIEKAMRDIHFSIKPNRNAKQQTLEVIPQLKAVMPLDRAQMRLRVALSGKEARKLREKLAALTTSIESETWDSGGE-----------LQMICLIDPGRYRQVDELIHSVKGSNGMLELLQLKEVTEGE 250          
BLAST of mRNA_M-pyrifera_M_contig10003.11.1 vs. uniprot
Match: UPI000771B1AA (ribosome maturation protein SBDS n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771B1AA)

HSP 1 Score: 145 bits (365), Expect = 2.260e-37
Identity = 82/164 (50.00%), Postives = 113/164 (68.90%), Query Frame = 0
Query:    1 QVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSTHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRIT-TEEDPAPLKEALVELG--VESFESGGEGGAAGGFGSGGQSLDFLVDPGMYRNVEEAVRTVADGRCSLEVLQLSVQQEGE 161
            QVSDKER  AL+S+ +D+AT V+EKCVNP + RPY VSMIEKAM+D+HFS  P R+AKQQAL+VI++LK VMP++RA+M+LR+  T ++   L+E +++L   VES +          + SG  +L  L+DPG YR ++E VR+   G   LE+L L    EGE
Sbjct:   95 QVSDKERHSALDSMLKDIATTVAEKCVNPETKRPYPVSMIEKAMKDIHFSVKPNRNAKQQALDVIQQLKTVMPLERAQMRLRVLITGKEARKLREKIMKLAAKVESED----------WDSGSLNLICLIDPGQYREIDELVRSETKGHGILELLNLKEVTEGE 248          
BLAST of mRNA_M-pyrifera_M_contig10003.11.1 vs. uniprot
Match: A0A7M7G5I7_NASVI (Ribosome maturation protein SBDS n=1 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7G5I7_NASVI)

HSP 1 Score: 144 bits (364), Expect = 3.170e-37
Identity = 83/164 (50.61%), Postives = 111/164 (67.68%), Query Frame = 0
Query:    1 QVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSTHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRITTE-EDPAPLKEALVELG--VESFESGGEGGAAGGFGSGGQSLDFLVDPGMYRNVEEAVRTVADGRCSLEVLQLSVQQEGE 161
            QVSDKER  AL+S+F+D+AT V++KCVNP S RPY+VS+IEKAM+D+HFS  P R+AKQQALEVI +LK VMP++RA+M+LR+    ++   L+E +V+L   VES +          + SG   L  L+DPG YR ++E VR    G   LE+L L    EGE
Sbjct:   95 QVSDKERHSALDSMFKDIATTVADKCVNPESKRPYSVSLIEKAMKDIHFSVKPNRNAKQQALEVITQLKTVMPLERAQMRLRVLVSGKEARKLREKIVKLTTKVESED----------WNSGSLDLVCLIDPGHYREIDELVRAETKGSGVLELLNLKEITEGE 248          
BLAST of mRNA_M-pyrifera_M_contig10003.11.1 vs. uniprot
Match: A0A6J0BZ08_NEOLC (Ribosome maturation protein SBDS n=3 Tax=Tenthredinoidea TaxID=85772 RepID=A0A6J0BZ08_NEOLC)

HSP 1 Score: 143 bits (360), Expect = 1.220e-36
Identity = 78/162 (48.15%), Postives = 109/162 (67.28%), Query Frame = 0
Query:    1 QVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSTHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRITTE-EDPAPLKEALVELGVESFESGGEGGAAGGFGSGGQSLDFLVDPGMYRNVEEAVRTVADGRCSLEVLQLSVQQEGE 161
            QVSDKERQ AL+S+F+D+AT VS+KCVNP + RPY +SMIEKAM+DVHFS  P R+AKQQAL+VI +LK VMP++RA+M+LR+    ++   L+E + +   +      EGG+         +L  L+DPG YR ++E VR+   G   LE++ L    EG+
Sbjct:   95 QVSDKERQSALDSMFKDIATTVSDKCVNPETKRPYPISMIEKAMKDVHFSVKPNRNAKQQALDVIPQLKAVMPLERAQMRLRVLISGKEARKLREKISKQATKIENESWEGGSL--------NLVCLIDPGQYREIDEMVRSETKGTGILELINLKEITEGD 248          
BLAST of mRNA_M-pyrifera_M_contig10003.11.1 vs. uniprot
Match: J9JZR0_ACYPI (Ribosome maturation protein SBDS n=9 Tax=Aphididae TaxID=27482 RepID=J9JZR0_ACYPI)

HSP 1 Score: 142 bits (359), Expect = 1.700e-36
Identity = 78/166 (46.99%), Postives = 113/166 (68.07%), Query Frame = 0
Query:    1 QVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSTHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRI-TTEEDPAPLKEALVELGVESFESGGEGGAAGGFGSGGQSLDFLVDPGMYRNVEEAVRTVADGRCSLEVLQLSVQQEGEADMD 165
            Q+SDKER   L++ ++D+ATIV++KCVNP + RPY+V+MIEKAM+DVH+S  P R++KQQAL+VI+ +K V+P+DRA M+L++ +T +D   LKE  V L   S ES         + SG  +L  L+DPG YR ++E VR+ + G   +EVL L    EG+  +D
Sbjct:   95 QISDKERSAQLDASYKDIATIVADKCVNPETKRPYSVTMIEKAMKDVHYSVKPNRNSKQQALDVIRLIKTVLPLDRAMMRLKVESTSKDAKKLKEKFVAL-ASSVESEN-------WDSGEITLVLLIDPGNYRQIDELVRSDSKGTTQMEVLSLKEVVEGDTFLD 252          
BLAST of mRNA_M-pyrifera_M_contig10003.11.1 vs. uniprot
Match: A0A482WXJ1_LAOST (Ribosome maturation protein SBDS n=2 Tax=Delphacidae TaxID=33362 RepID=A0A482WXJ1_LAOST)

HSP 1 Score: 142 bits (358), Expect = 2.380e-36
Identity = 80/166 (48.19%), Postives = 110/166 (66.27%), Query Frame = 0
Query:    1 QVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSTHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRITTE-EDPAPLKEALVELG----VESFESGGEGGAAGGFGSGGQSLDFLVDPGMYRNVEEAVRTVADGRCSLEVLQLSVQQEGE 161
            QVSDKER   L+S+F+D+AT V+EKCVNP + RPY+VS+IEKAM+DVHFS  P R+AKQQAL+VI +LK  MP++RA+M+L++T   ++   L++ +V+L      ES++ G              +L  L+DPG YR V+E VR+   G   LEVL L    EGE
Sbjct:   95 QVSDKERHTHLDSLFKDIATTVAEKCVNPETKRPYSVSLIEKAMKDVHFSVKPNRNAKQQALDVIPQLKATMPLERAQMRLQVTASGKETRKLRDKVVKLAGSVETESWDDGT------------LNLVLLIDPGHYREVDELVRSETKGSGQLEVLNLKEVTEGE 248          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10003.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHB7_9PHAE3.410e-13664.37C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z759_9STRA9.960e-5160.34SBDS protein C-terminal domain-containing protein ... [more]
A0A4D9CZ78_9STRA2.810e-4733.79C2H2-type domain-containing protein n=2 Tax=Monodo... [more]
UPI00158EA9401.060e-3951.23ribosome maturation protein SBDS n=1 Tax=Chelonus ... [more]
T1HFI4_RHOPR1.220e-3750.00Ribosome maturation protein SBDS (Fragment) n=5 Ta... [more]
UPI000771B1AA2.260e-3750.00ribosome maturation protein SBDS n=1 Tax=Cephus ci... [more]
A0A7M7G5I7_NASVI3.170e-3750.61Ribosome maturation protein SBDS n=1 Tax=Nasonia v... [more]
A0A6J0BZ08_NEOLC1.220e-3648.15Ribosome maturation protein SBDS n=3 Tax=Tenthredi... [more]
J9JZR0_ACYPI1.700e-3646.99Ribosome maturation protein SBDS n=9 Tax=Aphididae... [more]
A0A482WXJ1_LAOST2.380e-3648.19Ribosome maturation protein SBDS n=2 Tax=Delphacid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 278..305
NoneNo IPR availableGENE3D3.30.70.240coord: 78..165
e-value: 1.2E-8
score: 36.9
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilyGENE3D1.10.10.900coord: 5..77
e-value: 8.5E-35
score: 120.6
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilySUPERFAMILY109728Hypothetical protein AF0491, middle domaincoord: 2..75
IPR018978Ribosome maturation protein SBDS, C-terminalPFAMPF09377SBDS_Ccoord: 14..139
e-value: 1.3E-31
score: 109.0
IPR039100Ribosome maturation protein Sdo1/SBDS-likePANTHERPTHR10927RIBOSOME MATURATION PROTEIN SBDScoord: 1..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10003contigM-pyrifera_M_contig10003:2967..10021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10003.11.1mRNA_M-pyrifera_M_contig10003.11.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10003 2967..10021 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10003.11.1 ID=prot_M-pyrifera_M_contig10003.11.1|Name=mRNA_M-pyrifera_M_contig10003.11.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=392bp
QVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFS
THPTRSAKQQALEVIKKLKEVMPIDRAKMKLRITTEEDPAPLKEALVELG
VESFESGGEGGAAGGFGSGGQSLDFLVDPGMYRNVEEAVRTVADGRCSLE
VLQLSVQQEGEADMDVELLRKGLLAVKLKGEEEIRGKKARSGKSNDSEGV
AEEGLMMPAAGKRGKAKARIGRDSDYDNNDGRAGAAQQGGAVRARGEGMG
AGESGVGKRGGRKSKGTRRREKEDAAERDARQQEVQERQEKRDQARAERQ
AAAGEREGESAARRDTDEDPAAAGAGVKAKKALGCNTCVLTFPHTGAHRE
HYKSDLHRYNLKLKMKSVAPVSEEEFRLVDAEDFFHSDLRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037188Sdo1/SBDS_central_sf
IPR018978Ribosome_mat_SBDS_C
IPR039100Sdo1/SBDS-like