mRNA_M-pyrifera_M_contig99738.22921.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99738.22921.1 vs. uniprot
Match: A0A2E7C155_9GAMM (UvrABC system protein C n=9 Tax=Halieaceae TaxID=1706372 RepID=A0A2E7C155_9GAMM) HSP 1 Score: 407 bits (1046), Expect = 2.120e-137 Identity = 208/228 (91.23%), Postives = 222/228 (97.37%), Query Frame = 1 Query: 1 LAGGRPIPGEIIVTELPEDSEALAAALTQQAGRRVRIRASVRDARARWLQLARQTAVTNLQSHLAGRQSTLERLQALQELLSLPALPERMECFDISHSSGEATVASCVVFDQNGPRKADYRRFNIEGITGGDDYAAMQQALERRYKRLKEGEASLPDILFIDGGKGQVAQALQVLESLQLNTIEVVGVAKGVTRKAGFETLIRGNTGAEQQLRGDSPALHLIQSIRDE 684 LAGGRPIPGEIIVT+LP+DSEALAAALT QAGRRVRIRA+VRDARARW+QLARQTA TNLQSHLAGRQSTLERLQA+QELL LPALPERMECFDISHSSGEATVASCVVFDQNGPRK+DYRRFNI+GITGGDDYAAMQQALERRY+RLK+GE SLPDILFIDGGKGQVAQA+QVLE+LQLN+IEVVGVAKGVTRKAGFETLIRG+TG E +LRGDSPALHLIQSIRDE Sbjct: 304 LAGGRPIPGEIIVTDLPDDSEALAAALTHQAGRRVRIRANVRDARARWMQLARQTAETNLQSHLAGRQSTLERLQAIQELLDLPALPERMECFDISHSSGEATVASCVVFDQNGPRKSDYRRFNIDGITGGDDYAAMQQALERRYRRLKDGEGSLPDILFIDGGKGQVAQAMQVLEALQLNSIEVVGVAKGVTRKAGFETLIRGDTGRETRLRGDSPALHLIQSIRDE 531
BLAST of mRNA_M-pyrifera_M_contig99738.22921.1 vs. uniprot
Match: A0A2N5Y1B6_9GAMM (UvrABC system protein C n=2 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y1B6_9GAMM) HSP 1 Score: 355 bits (910), Expect = 6.810e-117 Identity = 181/228 (79.39%), Postives = 200/228 (87.72%), Query Frame = 1 Query: 1 LAGGRPIPGEIIVTELPEDSEALAAALTQQAGRRVRIRASVRDARARWLQLARQTAVTNLQSHLAGRQSTLERLQALQELLSLPALPERMECFDISHSSGEATVASCVVFDQNGPRKADYRRFNIEGITGGDDYAAMQQALERRYKRLKEGEASLPDILFIDGGKGQVAQALQVLESLQLNTIEVVGVAKGVTRKAGFETLIRGNTGAEQQLRGDSPALHLIQSIRDE 684 LA RPIPGEIIV ELPEDS LA AL+ +AGR+V IRA VR+ARARWLQLA QTA TNL SHLAGRQSTLERLQ LQ++L L LPERMECFDISHSSGEATVASCVVFD +GPRK+DYRRFNIEG+T GDDYAAMQQALERRY+RL+ GE SLPDILFIDGGKGQV QA+ V++ +QL ++EVVG+AKG TRKAGFETL+RG TGAEQQLRGD PALHLIQ IRDE Sbjct: 304 LAEARPIPGEIIVNELPEDSAILAEALSSKAGRKVTIRARVREARARWLQLAVQTAQTNLSSHLAGRQSTLERLQRLQDVLGLAELPERMECFDISHSSGEATVASCVVFDASGPRKSDYRRFNIEGVTAGDDYAAMQQALERRYRRLQAGEGSLPDILFIDGGKGQVTQAMSVMKEMQLPSVEVVGIAKGTTRKAGFETLVRGQTGAEQQLRGDDPALHLIQYIRDE 531
BLAST of mRNA_M-pyrifera_M_contig99738.22921.1 vs. uniprot
Match: A0A6C0U7P5_9GAMM (UvrABC system protein C n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0U7P5_9GAMM) HSP 1 Score: 352 bits (903), Expect = 7.710e-116 Identity = 178/228 (78.07%), Postives = 204/228 (89.47%), Query Frame = 1 Query: 1 LAGGRPIPGEIIVTELPEDSEALAAALTQQAGRRVRIRASVRDARARWLQLARQTAVTNLQSHLAGRQSTLERLQALQELLSLPALPERMECFDISHSSGEATVASCVVFDQNGPRKADYRRFNIEGITGGDDYAAMQQALERRYKRLKEGEASLPDILFIDGGKGQVAQALQVLESLQLNTIEVVGVAKGVTRKAGFETLIRGNTGAEQQLRGDSPALHLIQSIRDE 684 LA RPIP +IIV +PE S +LA AL+ QAGR+V IR+ VRD RARWLQLA QTA TNLQSHLAGRQSTLERL+ LQ++L+L LP+RMECFDISHSSGEATVASCVVFD++GPRK+DYRRFNIEG+T GDDYAAMQQALERRYKRL+ GE +LPDILFIDGGKGQV+QA+ VLES+QL ++EVVG+AKGVTRKAGFETL+RG +GAEQ+LRGDSPALHLIQ IRDE Sbjct: 304 LAAARPIPADIIVNAMPEGSASLAEALSLQAGRKVSIRSKVRDTRARWLQLALQTAETNLQSHLAGRQSTLERLRDLQQVLALEQLPQRMECFDISHSSGEATVASCVVFDESGPRKSDYRRFNIEGVTAGDDYAAMQQALERRYKRLQAGEGALPDILFIDGGKGQVSQAMGVLESMQLTSVEVVGIAKGVTRKAGFETLVRGRSGAEQRLRGDSPALHLIQYIRDE 531
BLAST of mRNA_M-pyrifera_M_contig99738.22921.1 vs. uniprot
Match: A0A2N5YEI3_9GAMM (UvrABC system protein C n=3 Tax=Halioglobus TaxID=1217416 RepID=A0A2N5YEI3_9GAMM) HSP 1 Score: 343 bits (880), Expect = 2.220e-112 Identity = 173/228 (75.88%), Postives = 199/228 (87.28%), Query Frame = 1 Query: 1 LAGGRPIPGEIIVTELPEDSEALAAALTQQAGRRVRIRASVRDARARWLQLARQTAVTNLQSHLAGRQSTLERLQALQELLSLPALPERMECFDISHSSGEATVASCVVFDQNGPRKADYRRFNIEGITGGDDYAAMQQALERRYKRLKEGEASLPDILFIDGGKGQVAQALQVLESLQLNTIEVVGVAKGVTRKAGFETLIRGNTGAEQQLRGDSPALHLIQSIRDE 684 L G R IPGE+IV LP+D+E LA AL+ QA R+V++R+ VRDARARWL+LA QTA TNLQSHLA RQ+ L RL+ LQ++L LP LPERMECFDISHSSGEATVASCVVFDQNGPRK+DYR+FNIEGITGGDDYAAMQQALERR+KRLK GE + PDILFIDGGKGQV QA++VL+ LQ++ +EV+GVAKGVTRKAGFETLI G+TG E QL GDSPALHLIQ +RDE Sbjct: 303 LNGSRAIPGEVIVNALPDDAETLAEALSVQAERKVKLRSRVRDARARWLRLAVQTAETNLQSHLADRQTVLSRLENLQDILQLPELPERMECFDISHSSGEATVASCVVFDQNGPRKSDYRKFNIEGITGGDDYAAMQQALERRFKRLKSGEGAQPDILFIDGGKGQVTQAMEVLQELQISGVEVIGVAKGVTRKAGFETLIDGSTGREWQLPGDSPALHLIQQVRDE 530
BLAST of mRNA_M-pyrifera_M_contig99738.22921.1 vs. uniprot
Match: UPI00167899F6 (excinuclease ABC subunit UvrC n=1 Tax=Halioglobus pacificus TaxID=930806 RepID=UPI00167899F6) HSP 1 Score: 340 bits (872), Expect = 3.540e-111 Identity = 172/228 (75.44%), Postives = 196/228 (85.96%), Query Frame = 1 Query: 1 LAGGRPIPGEIIVTELPEDSEALAAALTQQAGRRVRIRASVRDARARWLQLARQTAVTNLQSHLAGRQSTLERLQALQELLSLPALPERMECFDISHSSGEATVASCVVFDQNGPRKADYRRFNIEGITGGDDYAAMQQALERRYKRLKEGEASLPDILFIDGGKGQVAQALQVLESLQLNTIEVVGVAKGVTRKAGFETLIRGNTGAEQQLRGDSPALHLIQSIRDE 684 L+G + IP E+IV LP+D+E LA A T QAGR+V++R VR+ARARWLQLA QTA TNL+ HLAG+QS ERLQ+LQE L+L LP RMECFDISHSSGEATVASCVVFD+NGPRKADYR+FNIEGITGGDDYAAMQQALERRY+RLK+GE +LPDILFIDGGKGQVAQA+ VL L + + VVGVAKGVTRKAGFETLI G++GAE Q+ GDSPALHLIQ IRDE Sbjct: 304 LSGHQAIPSEVIVNALPDDAETLAEAFTVQAGRKVQVRTRVREARARWLQLASQTATTNLEGHLAGKQSMQERLQSLQEALALIELPRRMECFDISHSSGEATVASCVVFDENGPRKADYRKFNIEGITGGDDYAAMQQALERRYRRLKKGEGALPDILFIDGGKGQVAQAMSVLSDLSIQGVRVVGVAKGVTRKAGFETLIDGDSGAETQMNGDSPALHLIQHIRDE 531
BLAST of mRNA_M-pyrifera_M_contig99738.22921.1 vs. uniprot
Match: A0A7W2YIJ6_9GAMM (UvrABC system protein C n=1 Tax=Sediminihaliea albiluteola TaxID=2758564 RepID=A0A7W2YIJ6_9GAMM) HSP 1 Score: 336 bits (861), Expect = 1.590e-109 Identity = 171/228 (75.00%), Postives = 194/228 (85.09%), Query Frame = 1 Query: 1 LAGGRPIPGEIIVTELPEDSEALAAALTQQAGRRVRIRASVRDARARWLQLARQTAVTNLQSHLAGRQSTLERLQALQELLSLPALPERMECFDISHSSGEATVASCVVFDQNGPRKADYRRFNIEGITGGDDYAAMQQALERRYKRLKEGEASLPDILFIDGGKGQVAQALQVLESLQLNTIEVVGVAKGVTRKAGFETLIRGNTGAEQQLRGDSPALHLIQSIRDE 684 L+ RPIP +IIV LPED + L A + +AGR+VRIR VRD RARWLQLA QTA TNL +HLAGRQSTLER+Q+LQ++L LP LPERMECFDISHSSGEATVASCVVFDQNGPRK+DYR+FNIEG+ GDDYAAMQQALERRYKRL+ GE +LPDILFIDGGKGQV+QA+ VLE LQ+ + VVGVAKG TRKAGFETL+ G++G EQQL GDS ALHLIQ IRDE Sbjct: 304 LSASRPIPADIIVNALPEDVDTLIEAFSAEAGRQVRIRQRVRDTRARWLQLALQTAQTNLVAHLAGRQSTLERVQSLQDVLQLPDLPERMECFDISHSSGEATVASCVVFDQNGPRKSDYRKFNIEGVAAGDDYAAMQQALERRYKRLQSGEGALPDILFIDGGKGQVSQAMSVLEDLQIKGVMVVGVAKGHTRKAGFETLVMGDSGREQQLPGDSAALHLIQYIRDE 531
BLAST of mRNA_M-pyrifera_M_contig99738.22921.1 vs. uniprot
Match: A0A2N5X4V5_9GAMM (UvrABC system protein C n=1 Tax=Pseudohalioglobus lutimaris TaxID=1737061 RepID=A0A2N5X4V5_9GAMM) HSP 1 Score: 334 bits (856), Expect = 8.720e-109 Identity = 170/228 (74.56%), Postives = 193/228 (84.65%), Query Frame = 1 Query: 1 LAGGRPIPGEIIVTELPEDSEALAAALTQQAGRRVRIRASVRDARARWLQLARQTAVTNLQSHLAGRQSTLERLQALQELLSLPALPERMECFDISHSSGEATVASCVVFDQNGPRKADYRRFNIEGITGGDDYAAMQQALERRYKRLKEGEASLPDILFIDGGKGQVAQALQVLESLQLNTIEVVGVAKGVTRKAGFETLIRGNTGAEQQLRGDSPALHLIQSIRDE 684 L R IPGEIIV E P E L L +AGRRV++R+ VRDARARWL+LA QTA TNLQSHLAG+Q+TL RLQALQELLSL +PERMECFDISHSSGEATVASCVVFDQNGPRK+DYR+FNIEG+TGGDDYAAMQQALERRYKR+ GE + PD+LFIDGGKGQV QA++VL + Q++ + V+GVAKGVTRKAGFETL+ G TG E+QL GDSPALHLIQ IRDE Sbjct: 303 LNSTRAIPGEIIVNEEPGGIEVLCEVLQNEAGRRVKVRSRVRDARARWLRLAVQTAETNLQSHLAGKQTTLARLQALQELLSLAEMPERMECFDISHSSGEATVASCVVFDQNGPRKSDYRKFNIEGVTGGDDYAAMQQALERRYKRISSGEGAQPDVLFIDGGKGQVTQAMEVLAAQQISDVVVIGVAKGVTRKAGFETLVDGATGRERQLPGDSPALHLIQQIRDE 530
BLAST of mRNA_M-pyrifera_M_contig99738.22921.1 vs. uniprot
Match: B7RUD8_9GAMM (UvrABC system protein C n=3 Tax=Halieaceae TaxID=1706372 RepID=B7RUD8_9GAMM) HSP 1 Score: 332 bits (852), Expect = 2.250e-108 Identity = 172/228 (75.44%), Postives = 194/228 (85.09%), Query Frame = 1 Query: 1 LAGGRPIPGEIIVTELPEDSEALAAALTQQAGRRVRIRASVRDARARWLQLARQTAVTNLQSHLAGRQSTLERLQALQELLSLPALPERMECFDISHSSGEATVASCVVFDQNGPRKADYRRFNIEGITGGDDYAAMQQALERRYKRLKEGEASLPDILFIDGGKGQVAQALQVLESLQLNTIEVVGVAKGVTRKAGFETLIRGNTGAEQQLRGDSPALHLIQSIRDE 684 L G R +PGEIIV E P+ ALA AL+ QA R+V++R+ VRDARARWL+LA+QTA TNL +HLAG+Q+ RLQALQE LSLP +PERMECFDISHSSGEATVASCVVFDQNG RK+DYR+FNIEGITGGDDYAAMQQALERRYKRLK GE + PDILFIDGGKGQV+QA+ VLE LQ++ + V+GVAKG TRKAGFETLI G TG E QL GDSPALHLIQ IRDE Sbjct: 282 LNGTRAVPGEIIVNEEPDSVSALAEALSVQAERKVQLRSRVRDARARWLRLAQQTAETNLAAHLAGKQTVQARLQALQECLSLPEVPERMECFDISHSSGEATVASCVVFDQNGARKSDYRKFNIEGITGGDDYAAMQQALERRYKRLKSGEGTQPDILFIDGGKGQVSQAMGVLEDLQISGVLVIGVAKGATRKAGFETLIDGATGRESQLPGDSPALHLIQQIRDE 509
BLAST of mRNA_M-pyrifera_M_contig99738.22921.1 vs. uniprot
Match: UPI0019D32177 (excinuclease ABC subunit UvrC n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D32177) HSP 1 Score: 332 bits (850), Expect = 7.140e-108 Identity = 170/228 (74.56%), Postives = 193/228 (84.65%), Query Frame = 1 Query: 1 LAGGRPIPGEIIVTELPEDSEALAAALTQQAGRRVRIRASVRDARARWLQLARQTAVTNLQSHLAGRQSTLERLQALQELLSLPALPERMECFDISHSSGEATVASCVVFDQNGPRKADYRRFNIEGITGGDDYAAMQQALERRYKRLKEGEASLPDILFIDGGKGQVAQALQVLESLQLNTIEVVGVAKGVTRKAGFETLIRGNTGAEQQLRGDSPALHLIQSIRDE 684 L G +PIP +IIV PED + LA A + +AGR+VRIR VRD RARWLQLARQTA TNL +H+AGRQ+TLER QALQ++L L PERMECFDISHSSGEATVASCVVFDQ+GPRK+DYR+FNIEG+ GDDY AMQQALERRYKRLK GE ++PDILFIDGGKGQVAQA VLE+L+L+ I VVGVAKGVTRKAGFETL+ G++G EQQL GDS ALHLIQ IRDE Sbjct: 304 LNGSQPIPADIIVNTPPEDVDTLAEAFSVEAGRKVRIRHRVRDTRARWLQLARQTAETNLAAHVAGRQTTLERAQALQDILGLAQTPERMECFDISHSSGEATVASCVVFDQSGPRKSDYRKFNIEGVAAGDDYGAMQQALERRYKRLKSGEGAMPDILFIDGGKGQVAQATGVLEALELDGITVVGVAKGVTRKAGFETLVMGSSGREQQLPGDSAALHLIQYIRDE 531
BLAST of mRNA_M-pyrifera_M_contig99738.22921.1 vs. uniprot
Match: A0A2E0Z0P0_9GAMM (UvrABC system protein C n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0Z0P0_9GAMM) HSP 1 Score: 331 bits (848), Expect = 1.350e-107 Identity = 170/228 (74.56%), Postives = 193/228 (84.65%), Query Frame = 1 Query: 1 LAGGRPIPGEIIVTELPEDSEALAAALTQQAGRRVRIRASVRDARARWLQLARQTAVTNLQSHLAGRQSTLERLQALQELLSLPALPERMECFDISHSSGEATVASCVVFDQNGPRKADYRRFNIEGITGGDDYAAMQQALERRYKRLKEGEASLPDILFIDGGKGQVAQALQVLESLQLNTIEVVGVAKGVTRKAGFETLIRGNTGAEQQLRGDSPALHLIQSIRDE 684 L R +P EIIV LPED++ LA AL+ A R+V+IR VR+ARARWL+LA QTA TNL SHLA +Q+ L RLQALQ+LL LP PERMECFDISHS+GEATVASCVVFDQNGPRKADYR+FNIEGITGGDDYAAMQQALERRYKRLK GE +LPD+LFIDGGKGQVAQA+ VLE LQ++ +EV+GVAKG TRKAGFETL+ G +G E+QL GDS ALHLIQ IRDE Sbjct: 304 LNESRAVPAEIIVNALPEDADTLAEALSVHAQRQVKIRQRVREARARWLKLATQTAETNLVSHLADKQTILGRLQALQDLLDLPETPERMECFDISHSAGEATVASCVVFDQNGPRKADYRKFNIEGITGGDDYAAMQQALERRYKRLKSGEGALPDVLFIDGGKGQVAQAMAVLEDLQISGVEVIGVAKGTTRKAGFETLVSGASGRERQLPGDSGALHLIQQIRDE 531 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99738.22921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99738.22921.1 >prot_M-pyrifera_M_contig99738.22921.1 ID=prot_M-pyrifera_M_contig99738.22921.1|Name=mRNA_M-pyrifera_M_contig99738.22921.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp LAGGRPIPGEIIVTELPEDSEALAAALTQQAGRRVRIRASVRDARARWLQback to top mRNA from alignment at M-pyrifera_M_contig99738:1..684- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99738.22921.1 ID=mRNA_M-pyrifera_M_contig99738.22921.1|Name=mRNA_M-pyrifera_M_contig99738.22921.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig99738:1..684- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99738:1..684- >mRNA_M-pyrifera_M_contig99738.22921.1 ID=mRNA_M-pyrifera_M_contig99738.22921.1|Name=mRNA_M-pyrifera_M_contig99738.22921.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1368bp|location=Sequence derived from alignment at M-pyrifera_M_contig99738:1..684- (Macrocystis pyrifera P11B4 male)back to top |