mRNA_M-pyrifera_M_contig99573.22896.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99573.22896.1 vs. uniprot
Match: M5SW71_9BACT (Uncharacterized protein n=3 Tax=Pirellulaceae TaxID=2691357 RepID=M5SW71_9BACT) HSP 1 Score: 161 bits (407), Expect = 1.640e-48 Identity = 75/121 (61.98%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 1 VLTGTISPDAFTAAIGVTPSRTQVSQTRPEGIKDVAAGWFLTSQGKFGSRDVRRHIDYLLDRIEGKADALVSVCRSGGSADIMCYWVTASGQGGPSLLPEQMARLSALNLEIWFDIYTGVS 363 V TG +SPD FT IGVTPS+TQ Q RP+G K++ A WFLTSQ + SRDVRRHID++LD+I K DA + SGG D+MCYWV+ASGQGGPSLLP Q ++L+AL LEIWFD+Y S Sbjct: 20 VFTGDVSPDRFTEYIGVTPSKTQEFQIRPDGWKNLPAAWFLTSQSEIDSRDVRRHIDFVLDQINAKTDAFAWIRESGGITDVMCYWVSASGQGGPSLLPAQSSKLAALGLEIWFDVYFDAS 140
BLAST of mRNA_M-pyrifera_M_contig99573.22896.1 vs. uniprot
Match: A0A5C5WHI3_9BACT (Uncharacterized protein n=1 Tax=Rubripirellula amarantea TaxID=2527999 RepID=A0A5C5WHI3_9BACT) HSP 1 Score: 136 bits (343), Expect = 1.370e-38 Identity = 58/115 (50.43%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 13 TISPDAFTAAIGVTPSRTQVSQTRPEGIKDVAAGWFLTSQGKFGSRDVRRHIDYLLDRIEGKADALVSVCRSGGSADIMCYWVTASGQGGPSLLPEQMARLSALNLEIWFDIYTG 357 T+SP+ T+ +GV P+++Q +++RP+G++DV AGWFL+S G S DVRRHID+L++++ D L ++ SGG ADI C+WV+A G GGPS+ P QM+ L +L LE+WFD+Y G Sbjct: 44 TLSPEEITSLLGVEPTKSQPAESRPKGVRDVPAGWFLSSDGILDSCDVRRHIDWLINKLLDSHDGLKTIRASGGRADISCFWVSAGGHGGPSIWPHQMSSLGSLGLELWFDVYLG 158
BLAST of mRNA_M-pyrifera_M_contig99573.22896.1 vs. uniprot
Match: A0A0J1BHE5_RHOIS (Uncharacterized protein n=1 Tax=Rhodopirellula islandica TaxID=595434 RepID=A0A0J1BHE5_RHOIS) HSP 1 Score: 135 bits (339), Expect = 1.520e-38 Identity = 57/114 (50.00%), Postives = 84/114 (73.68%), Query Frame = 1 Query: 16 ISPDAFTAAIGVTPSRTQVSQTRPEGIKDVAAGWFLTSQGKFGSRDVRRHIDYLLDRIEGKADALVSVCRSGGSADIMCYWVTASGQGGPSLLPEQMARLSALNLEIWFDIYTG 357 +SPD T+ +GV+P+++Q +Q RPEG++DV +GWFL+S+G SRDVRRHID++++++ + S+ R+GG ADI C+W AS GGPS+ P QM L +L LE+WFD+Y G Sbjct: 2 LSPDEITSLLGVSPTKSQPAQPRPEGVRDVPSGWFLSSEGVLDSRDVRRHIDWIINQVGDRTGGFDSIRRAGGRADISCFWRAASFHGGPSIWPHQMTVLGSLGLELWFDVYLG 115
BLAST of mRNA_M-pyrifera_M_contig99573.22896.1 vs. uniprot
Match: UPI0013E9F62A (DUF4279 domain-containing protein n=1 Tax=Aquisphaera sp. JC669 TaxID=2712864 RepID=UPI0013E9F62A) HSP 1 Score: 108 bits (269), Expect = 1.470e-27 Identity = 56/120 (46.67%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 10 GTISPDAFTAAIGVTPS----RTQVSQT--RPEGIKDVAAGWFLTSQGKFGSRDVRRHIDYLLDRIEGKADALVSVCRSGGSADIMCYWVTASGQGGPSLLPEQMARLSALNLEIWFDIY 351 G I P A T + + PS R +++Q RP + + GWFL SQG+ SRD RRHID+LLDR+ +A+A+ S+ G DI CYW + SG GGP++ P QM RL+ LN+E+WFD Y Sbjct: 21 GEIDPAAITDRLEIEPSSWQRRGELAQRAGRPPNVATIN-GWFLESQGQVESRDSRRHIDWLLDRLVPRAEAIRSLQEKGCRMDISCYWCSRSGHGGPTIPPSQMRRLAELNIELWFDFY 139
BLAST of mRNA_M-pyrifera_M_contig99573.22896.1 vs. uniprot
Match: A0A3C1AYH0_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3C1AYH0_9BACT) HSP 1 Score: 107 bits (266), Expect = 3.740e-27 Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1 Query: 19 SPDAFTAAIGVTPSRTQVSQTRPE--GIKDVAAGWFLTSQGKFGSRDVRRHIDYLLDRIEGKADALVSVCRSGGSADIMCYWVTASGQGGPSLLPEQMARLSALNLEIWFDIY 351 SP+ T + V PS+TQ P+ GI +GWFL S+G+ SRDVRRH+D++LD+IEG + + G SAD+ CYW+ GQGGP L P QMARLS+LNL FD+Y Sbjct: 26 SPEKVTDLLKVEPSKTQKVGPCPQRNGIIRRVSGWFLCSKGQVESRDVRRHVDWVLDQIEGSKTGIPLLAEQGWSADVFCYWL-GIGQGGPMLDPFQMARLSSLNLSCGFDVY 137
BLAST of mRNA_M-pyrifera_M_contig99573.22896.1 vs. uniprot
Match: A0A2S4N4G0_9FLAO (Uncharacterized protein DUF4279 n=1 Tax=Flavobacterium croceum DSM 17960 TaxID=1121886 RepID=A0A2S4N4G0_9FLAO) HSP 1 Score: 102 bits (254), Expect = 2.120e-25 Identity = 47/114 (41.23%), Postives = 71/114 (62.28%), Query Frame = 1 Query: 19 SPDAFTAAIGVTPSRTQVSQTRPEGIKDVAA---GWFLTSQGKFGSRDVRRHIDYLLDRIEGKADALVSVCRSGGSADIMCYWVTASGQGGPSLLPEQMARLSALNLEIWFDIY 351 SP+ T +G+ PS+T V + E + + GWFLT+ GK S+D RRHID+L D++ + + G DI CYW++ +GQGGP+L P+Q+++L +L L+ WFDIY Sbjct: 24 SPNELTEYLGIQPSKTHVKSQKNELQTNKSIEHNGWFLTTDGKVNSKDSRRHIDFLADKLLPINFKIKELISKGAKIDISCYWLSENGQGGPTLSPQQLSKLGSLGLDFWFDIY 137
BLAST of mRNA_M-pyrifera_M_contig99573.22896.1 vs. uniprot
Match: A0A5B9VY40_9BACT (Uncharacterized protein n=1 Tax=Aquisphaera giovannonii TaxID=406548 RepID=A0A5B9VY40_9BACT) HSP 1 Score: 102 bits (255), Expect = 2.660e-25 Identity = 56/128 (43.75%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 1 VLTGTISPDAFTAAIGVTPS---RTQVSQTRPEGIKDVAA--GWFLTSQGKFGSRDVRRHIDYLLDRIEGKADALVSVCRSGGSADIMCYWVTASGQGGPSLLPEQMARLSALNLEIWFDIYTGVSAD 369 V G I P A T +G+ PS R + R G +A GWFL S+G+ SRD RRHID+LLD++ +A+A+ S+ G DI CYW++ SG GGP + P QM RL+ LN+E+ FD Y D Sbjct: 18 VYPGDIDPAAITDRLGIEPSSWQRRDEAARRAGGPPRLATVNGWFLESRGRVDSRDSRRHIDWLLDQLAPRAEAIRSLQERGCRMDISCYWLSRSGHGGPIIPPTQMRRLAELNIELGFDFYGPYEED 145
BLAST of mRNA_M-pyrifera_M_contig99573.22896.1 vs. uniprot
Match: A0A851GIY9_9BACT (DUF4279 domain-containing protein n=1 Tax=Oceaniferula marina TaxID=2748318 RepID=A0A851GIY9_9BACT) HSP 1 Score: 101 bits (252), Expect = 3.050e-25 Identity = 55/123 (44.72%), Postives = 73/123 (59.35%), Query Frame = 1 Query: 16 ISPDAFTAAIGVTPSRTQVSQTRPEGIKDVAA--GWFLTSQGKFGSRDVRRHIDYLLDRIEGKADALVSVCRSGGSADIMCYWVTASGQGGPSLLPEQMARLSALNLEIWFDIYTGVSADDHS 378 ISP T + V P+R V + GI+ A GWFL+SQ K S D RRHID++LD+I +++ L + G DI +WV+ S GGP+L P QM RLS LN+E+W+DIY DD S Sbjct: 5 ISPTEVTTRLNVEPTRQNVKGEKIAGIRRPARINGWFLSSQNKVESFDSRRHIDWILDQIYERSEELNDMMEQGFCIDITSFWVSKSANGGPTLSPYQMKRLSDLNIEVWWDIY--FDDDDES 125
BLAST of mRNA_M-pyrifera_M_contig99573.22896.1 vs. uniprot
Match: A0A0N0CYC5_9BACT (Uncharacterized protein n=1 Tax=bacterium 336/3 TaxID=1664068 RepID=A0A0N0CYC5_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 2.420e-24 Identity = 46/113 (40.71%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 22 PDAFTAAIGVTPSRTQVSQTRPEGIKDVAA---GWFLTSQGKFGSRDVRRHIDYLLDRIEGKADALVSVCRSGGSADIMCYWVTASGQGGPSLLPEQMARLSALNLEIWFDIY 351 PD T +G+ PS TQ+ + + + GWFLT++ S+D RRHIDYL D++ L S+ G DI C+W + SGQGGP+L +Q+++L+ L +E+WFDIY Sbjct: 25 PDKLTEYLGILPSETQIKGQESKQLTNKLIEKNGWFLTTENIIKSKDSRRHIDYLADKLLPIKSKLKSLIADGSEVDISCFWESESGQGGPTLSQQQLSKLAELGIELWFDIY 137
BLAST of mRNA_M-pyrifera_M_contig99573.22896.1 vs. uniprot
Match: A0A2E0QN21_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E0QN21_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 1.350e-23 Identity = 49/114 (42.98%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 19 SPDAFTAAIGVTPSRTQVSQTRPEGIKDV---AAGWFLTSQGKFGSRDVRRHIDYLLDRIEGKADALVSVCRSGGSADIMCYWVTASGQGGPSLLPEQMARLSALNLEIWFDIY 351 +PDA T A+G++PSRTQ K V +GWFL S+ + S+D+RRHID++LD++ + V + + G +DI CYW++ G GGP L P QM L+ LNL FD+Y Sbjct: 26 TPDAVTEALGISPSRTQAKGQNTVNGKQVQRRVSGWFLCSRDEVQSKDIRRHIDWILDQVSELRNEFVRLNQEGWRSDISCYWLS-HGHGGPMLSPSQMESLAKLNLTCGFDVY 138 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99573.22896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99573.22896.1 >prot_M-pyrifera_M_contig99573.22896.1 ID=prot_M-pyrifera_M_contig99573.22896.1|Name=mRNA_M-pyrifera_M_contig99573.22896.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp VLTGTISPDAFTAAIGVTPSRTQVSQTRPEGIKDVAAGWFLTSQGKFGSRback to top mRNA from alignment at M-pyrifera_M_contig99573:8..397+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99573.22896.1 ID=mRNA_M-pyrifera_M_contig99573.22896.1|Name=mRNA_M-pyrifera_M_contig99573.22896.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig99573:8..397+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99573:8..397+ >mRNA_M-pyrifera_M_contig99573.22896.1 ID=mRNA_M-pyrifera_M_contig99573.22896.1|Name=mRNA_M-pyrifera_M_contig99573.22896.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig99573:8..397+ (Macrocystis pyrifera P11B4 male)back to top |