mRNA_M-pyrifera_M_contig99495.22889.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99495.22889.1 vs. uniprot
Match: A0A518AFR7_9PLAN (DprA_WH domain-containing protein n=10 Tax=Gimesia TaxID=1649453 RepID=A0A518AFR7_9PLAN) HSP 1 Score: 384 bits (986), Expect = 5.950e-132 Identity = 195/202 (96.53%), Postives = 200/202 (99.01%), Query Frame = 1 Query: 1 RTIAVMATGLSHIYPPEHRELSEQVSAQGALVTEFPLDQAPVAGLFPQRNRIIIGLSMGVLLIEAGRKSGALHTARHAYEQGRDVFAVPGRIDHPASAGCHDLIRDGAMLVRSVEDVLEGLSPAKTPVKVSENREVHTPRELSLSDFERDVLNLVTLEPQHLNEIVQSSNLDSSRILSTLTVLEMRKVVKRLPGGFLVRATG 606 RTIAVMATGLSHIYPPEH+ELSEQV+ QGALVTEFPLDQAPVAGLFPQRNRII GLSMGVLLIEAGRKSGALHTARHAYEQGRDVFA+PGRIDHPASAGCHDLIRDGAMLVRSVEDVLEGLSPAKTPVKVSENREVHTPRELSLSDFERDVLNLVTLEPQHLNEIV+SSNLDSSRILSTLTVLEMRKVVKRLPGG+LVRATG Sbjct: 176 RTIAVMATGLSHIYPPEHQELSEQVAEQGALVTEFPLDQAPVAGLFPQRNRIISGLSMGVLLIEAGRKSGALHTARHAYEQGRDVFAIPGRIDHPASAGCHDLIRDGAMLVRSVEDVLEGLSPAKTPVKVSENREVHTPRELSLSDFERDVLNLVTLEPQHLNEIVESSNLDSSRILSTLTVLEMRKVVKRLPGGYLVRATG 377
BLAST of mRNA_M-pyrifera_M_contig99495.22889.1 vs. uniprot
Match: A0A517RPF2_9PLAN (DNA ligase n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517RPF2_9PLAN) HSP 1 Score: 365 bits (936), Expect = 2.280e-124 Identity = 184/202 (91.09%), Postives = 194/202 (96.04%), Query Frame = 1 Query: 1 RTIAVMATGLSHIYPPEHRELSEQVSAQGALVTEFPLDQAPVAGLFPQRNRIIIGLSMGVLLIEAGRKSGALHTARHAYEQGRDVFAVPGRIDHPASAGCHDLIRDGAMLVRSVEDVLEGLSPAKTPVKVSENREVHTPRELSLSDFERDVLNLVTLEPQHLNEIVQSSNLDSSRILSTLTVLEMRKVVKRLPGGFLVRATG 606 RTIAVMATGLSHIYPPEH+ LSEQV+ QGALVTEFPLDQAPVAGLFPQRNRII GLSMGV+LIEAGRKSGALHTARHAYEQGR+VFAVPGRIDHPASAGCHDLIRDGAMLVRSVED+LEGL PAKTPV +E+REVHTPREL LS+FERD+LNLVTLEP HLNEIVQSSNLDSSRILSTLT+LEMRKVVKRLPGGFLVRATG Sbjct: 175 RTIAVMATGLSHIYPPEHQGLSEQVARQGALVTEFPLDQAPVAGLFPQRNRIISGLSMGVVLIEAGRKSGALHTARHAYEQGREVFAVPGRIDHPASAGCHDLIRDGAMLVRSVEDILEGLGPAKTPVLTAESREVHTPRELVLSEFERDILNLVTLEPLHLNEIVQSSNLDSSRILSTLTILEMRKVVKRLPGGFLVRATG 376
BLAST of mRNA_M-pyrifera_M_contig99495.22889.1 vs. uniprot
Match: A0A517VMW7_9PLAN (DprA_WH domain-containing protein n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VMW7_9PLAN) HSP 1 Score: 355 bits (912), Expect = 1.010e-120 Identity = 176/202 (87.13%), Postives = 192/202 (95.05%), Query Frame = 1 Query: 1 RTIAVMATGLSHIYPPEHRELSEQVSAQGALVTEFPLDQAPVAGLFPQRNRIIIGLSMGVLLIEAGRKSGALHTARHAYEQGRDVFAVPGRIDHPASAGCHDLIRDGAMLVRSVEDVLEGLSPAKTPVKVSENREVHTPRELSLSDFERDVLNLVTLEPQHLNEIVQSSNLDSSRILSTLTVLEMRKVVKRLPGGFLVRATG 606 RTIAVMATGL+HIYPPEHR+L++ V+ QGA+VTEF LDQAPVAGLFPQRNRII G SMGV+LIEAGRKSGALHTARHAYEQGR+VFAVPGRIDHPASAGCHDLIRDGAMLVR VED+LEGL PAKTPV ++NREVHTPRELSLS+FERD+LNLVTLEPQHLNEIVQSS+LDSSRILSTLT+LEMRKVVKRLPGG+LVRA G Sbjct: 175 RTIAVMATGLAHIYPPEHRDLADSVARQGAIVTEFCLDQAPVAGLFPQRNRIISGFSMGVVLIEAGRKSGALHTARHAYEQGREVFAVPGRIDHPASAGCHDLIRDGAMLVRDVEDILEGLGPAKTPVMTAQNREVHTPRELSLSEFERDILNLVTLEPQHLNEIVQSSHLDSSRILSTLTILEMRKVVKRLPGGYLVRAMG 376
BLAST of mRNA_M-pyrifera_M_contig99495.22889.1 vs. uniprot
Match: A0A517WNM0_9PLAN (DprA_WH domain-containing protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WNM0_9PLAN) HSP 1 Score: 351 bits (901), Expect = 4.710e-119 Identity = 175/201 (87.06%), Postives = 191/201 (95.02%), Query Frame = 1 Query: 1 RTIAVMATGLSHIYPPEHRELSEQVSAQGALVTEFPLDQAPVAGLFPQRNRIIIGLSMGVLLIEAGRKSGALHTARHAYEQGRDVFAVPGRIDHPASAGCHDLIRDGAMLVRSVEDVLEGLSPAKTPVKVSENREVHTPRELSLSDFERDVLNLVTLEPQHLNEIVQSSNLDSSRILSTLTVLEMRKVVKRLPGGFLVRAT 603 RTIAVMATGLSHIYP EH+ELSE+V+ QGALVTEFPLDQAPVAGLFPQRNRII GLSMGV+LIEAGRKSGALHTARHAYEQGRDVFAVPGRIDHPASAGCHDLIRDGAMLVR +ED+LEGL P PV +++RE+HTPRELSLSDFE+++LNLVTLEPQHLN+IVQSS+LDSSRILSTLT+LEMRKVVKRLPGGFLVRAT Sbjct: 175 RTIAVMATGLSHIYPLEHQELSEKVANQGALVTEFPLDQAPVAGLFPQRNRIISGLSMGVVLIEAGRKSGALHTARHAYEQGRDVFAVPGRIDHPASAGCHDLIRDGAMLVRDIEDILEGLGPLMAPVVTTQHREIHTPRELSLSDFEQNILNLVTLEPQHLNDIVQSSHLDSSRILSTLTILEMRKVVKRLPGGFLVRAT 375
BLAST of mRNA_M-pyrifera_M_contig99495.22889.1 vs. uniprot
Match: A0A3E0Q8R9_9BACT (DNA-protecting protein DprA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q8R9_9BACT) HSP 1 Score: 275 bits (702), Expect = 3.730e-89 Identity = 129/201 (64.18%), Postives = 172/201 (85.57%), Query Frame = 1 Query: 1 RTIAVMATGLSHIYPPEHRELSEQVSAQGALVTEFPLDQAPVAGLFPQRNRIIIGLSMGVLLIEAGRKSGALHTARHAYEQGRDVFAVPGRIDHPASAGCHDLIRDGAMLVRSVEDVLEGLSPAKTPVKVSENREVHTPRELSLSDFERDVLNLVTLEPQHLNEIVQSSNLDSSRILSTLTVLEMRKVVKRLPGGFLVRAT 603 RTIAV ATGL++IYPPEH+ L+++++AQGALV+E PLD+ P G+FPQRNRII GLS+GV++IEA RKSGALHTARHA EQGR+VFA+PGRID AS GCHDLIRDGA L+R +DVLE L P PV +++ +HTPRELSL+D ER VLNLVT +PQH+++++Q+ +++SR+L+TLT+LEM+++++RLPGGF+VRA+ Sbjct: 156 RTIAVSATGLANIYPPEHKTLADEIAAQGALVSESPLDRGPSRGIFPQRNRIISGLSLGVIIIEANRKSGALHTARHAMEQGREVFALPGRIDSLASQGCHDLIRDGATLIRGPDDVLEALGPLMQPVTTPDDQVIHTPRELSLTDQERSVLNLVTADPQHVDQLLQAVEIETSRVLATLTMLEMKRLIRRLPGGFIVRAS 356
BLAST of mRNA_M-pyrifera_M_contig99495.22889.1 vs. uniprot
Match: A0A7C7VJ58_9PLAN (DNA-processing protein DprA n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7VJ58_9PLAN) HSP 1 Score: 259 bits (662), Expect = 4.550e-85 Identity = 123/201 (61.19%), Postives = 165/201 (82.09%), Query Frame = 1 Query: 1 RTIAVMATGLSHIYPPEHRELSEQVSAQGALVTEFPLDQAPVAGLFPQRNRIIIGLSMGVLLIEAGRKSGALHTARHAYEQGRDVFAVPGRIDHPASAGCHDLIRDGAMLVRSVEDVLEGLSPAKTPVKVSENREVHTPRELSLSDFERDVLNLVTLEPQHLNEIVQSSNLDSSRILSTLTVLEMRKVVKRLPGGFLVRAT 603 RTIAV ATGL+ +YPPEH++LS Q+ GA+V+E LDQ PVAGLFPQRNRII GLS+GV+++EA R SGA+HTARHA EQGR+V AVPGR+D AS GCHDLIRDGA LVR V+DVL+ L P P++ ++ VHTPREL+L+ ER VLNL+ EP+ +++++Q ++L++ R+L+TLTVLEM+++++RLPGGFL+R+T Sbjct: 14 RTIAVAATGLAQVYPPEHKDLSTQIEQSGAVVSESRLDQEPVAGLFPQRNRIISGLSLGVIIVEATRNSGAIHTARHAMEQGREVMAVPGRVDSLASEGCHDLIRDGAALVRHVDDVLQALGPLPQPLQRTQTETVHTPRELTLNPQERHVLNLIGQEPKPIDQVLQEADLETPRVLATLTVLEMKRLIRRLPGGFLIRST 214
BLAST of mRNA_M-pyrifera_M_contig99495.22889.1 vs. uniprot
Match: A0A2E7D832_9PLAN (DNA-protecting protein DprA n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D832_9PLAN) HSP 1 Score: 260 bits (665), Expect = 2.700e-83 Identity = 126/202 (62.38%), Postives = 167/202 (82.67%), Query Frame = 1 Query: 1 RTIAVMATGLSHIYPPEHRELSEQVSAQGALVTEFPLDQAPVAGLFPQRNRIIIGLSMGVLLIEAGRKSGALHTARHAYEQGRDVFAVPGRIDHPASAGCHDLIRDGAMLVRSVEDVLEGLSPAKTPVKVSENRE-VHTPRELSLSDFERDVLNLVTLEPQHLNEIVQSSNLDSSRILSTLTVLEMRKVVKRLPGGFLVRAT 603 RTIAV ATGL IYPPEH++L+++V+A GA+VTE LDQ P AGLFPQRNRII G+S+GV+++EA R SGALHTARHA EQGR+V A+PGR+D S GCHDLIRDGA L+ +DVL+ L P PV+ + E VH+PREL+L+D ER++LNLVT EPQH++EI+++S+++ +R+LSTLTVLEM+++++RLPGG LVR+T Sbjct: 174 RTIAVTATGLCEIYPPEHKQLAQEVAANGAIVTEGRLDQKPSAGLFPQRNRIISGMSLGVIVVEATRNSGALHTARHAMEQGREVMAIPGRVDQLTSEGCHDLIRDGATLITCPDDVLKSLGPLVEPVETAGGNETVHSPRELTLNDREREILNLVTTEPQHIDEILRASDIEPARVLSTLTVLEMKRMIRRLPGGSLVRST 375
BLAST of mRNA_M-pyrifera_M_contig99495.22889.1 vs. uniprot
Match: A0A517ZB99_9PLAN (DprA_WH domain-containing protein n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZB99_9PLAN) HSP 1 Score: 260 bits (664), Expect = 3.100e-83 Identity = 123/199 (61.81%), Postives = 161/199 (80.90%), Query Frame = 1 Query: 1 RTIAVMATGLSHIYPPEHRELSEQVSAQGALVTEFPLDQAPVAGLFPQRNRIIIGLSMGVLLIEAGRKSGALHTARHAYEQGRDVFAVPGRIDHPASAGCHDLIRDGAMLVRSVEDVLEGLSPAKTPVKVSENREVHTPRELSLSDFERDVLNLVTLEPQHLNEIVQSSNLDSSRILSTLTVLEMRKVVKRLPGGFLVR 597 RTIAV ATGL+ IYPPEH EL+E + GA+++E PLD+ P G+FPQRNRII G+S+GV+++EA RKSGALHTARHA EQGR+VFAVPG ID PAS GCHDLIRDGA LVRS++D+LE L P + PV+ + + PREL+LSD E +LNLV EP+H++E+V + +++SR+LST+TVLEM+++V R+PGG+LVR Sbjct: 170 RTIAVCATGLAKIYPPEHAELAEDILDAGAVISESPLDREPTPGIFPQRNRIISGISLGVVIVEANRKSGALHTARHAMEQGREVFAVPGPIDSPASQGCHDLIRDGATLVRSIDDILEELGPLRQPVRTDDQTVIREPRELNLSDQEMAILNLVHREPRHIDEVVNEAAIETSRVLSTITVLEMKRLVTRMPGGYLVR 368
BLAST of mRNA_M-pyrifera_M_contig99495.22889.1 vs. uniprot
Match: A0A2E8FLU4_9PLAN (DNA-protecting protein DprA n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8FLU4_9PLAN) HSP 1 Score: 256 bits (654), Expect = 1.170e-81 Identity = 122/201 (60.70%), Postives = 165/201 (82.09%), Query Frame = 1 Query: 1 RTIAVMATGLSHIYPPEHRELSEQVSAQGALVTEFPLDQAPVAGLFPQRNRIIIGLSMGVLLIEAGRKSGALHTARHAYEQGRDVFAVPGRIDHPASAGCHDLIRDGAMLVRSVEDVLEGLSPAKTPVKVSENREVHTPRELSLSDFERDVLNLVTLEPQHLNEIVQSSNLDSSRILSTLTVLEMRKVVKRLPGGFLVRAT 603 RTIAV+ATG++H+YPPEH +L+EQV+ GA+V+E LDQ PVAGLFPQRNRII GL++GV+++EA R+SGALHTARHA EQGR+VFAVPG ID PAS GCHDL++DGA LV ++D+LE L P PV++ + +H PRELSL+D ER VL +V +PQHL+E+++ S L+++ L+TLTVLEM+++V+RLPG ++VR + Sbjct: 174 RTIAVLATGVNHVYPPEHVDLAEQVTRYGAVVSEARLDQTPVAGLFPQRNRIISGLALGVVVVEATRRSGALHTARHAIEQGREVFAVPGPIDSPASQGCHDLLKDGARLVTGLDDILEELGPLIRPVRLDDTATIHVPRELSLNDRERQVLGIVGPDPQHLDELLRRSPLEAAATLATLTVLEMKRLVRRLPGSYVVRGS 374
BLAST of mRNA_M-pyrifera_M_contig99495.22889.1 vs. uniprot
Match: A0A3L7S4P2_9BACT (DNA-protecting protein DprA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7S4P2_9BACT) HSP 1 Score: 255 bits (651), Expect = 4.320e-81 Identity = 126/199 (63.32%), Postives = 159/199 (79.90%), Query Frame = 1 Query: 1 RTIAVMATGLSHIYPPEHRELSEQVSAQGALVTEFPLDQAPVAGLFPQRNRIIIGLSMGVLLIEAGRKSGALHTARHAYEQGRDVFAVPGRIDHPASAGCHDLIRDGAMLVRSVEDVLEGLSPAKTPVKVSENREVHTPRELSLSDFERDVLNLVTLEPQHLNEIVQSSNLDSSRILSTLTVLEMRKVVKRLPGGFLVR 597 RTIAV ATG++ IYPPEH +L+ V+ QG L+TE P+DQ P +GLFPQRNRII GLS+GV+LIEAGR SGALHTARHA EQ RDVFA+PGR+D AS GC DLIRDGA L+R+V+DVL L P PVK + VH P EL LSD ER +LNLVT E ++++++ +N+++SR+LSTLTVLEM+++V+RLPGGF+VR Sbjct: 184 RTIAVCATGMNTIYPPEHADLAAAVANQGCLLTESPMDQTPKSGLFPQRNRIISGLSLGVVLIEAGRSSGALHTARHAMEQNRDVFAMPGRVDSDASLGCLDLIRDGATLIRNVDDVLSALGPLVAPVKRTPRETVHQPAELVLSDQERAILNLVTTESVAVDDVIRGANIEASRVLSTLTVLEMKRLVRRLPGGFVVR 382 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99495.22889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99495.22889.1 >prot_M-pyrifera_M_contig99495.22889.1 ID=prot_M-pyrifera_M_contig99495.22889.1|Name=mRNA_M-pyrifera_M_contig99495.22889.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp MATGLSHIYPPEHRELSEQVSAQGALVTEFPLDQAPVAGLFPQRNRIIIGback to top mRNA from alignment at M-pyrifera_M_contig99495:80..688- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99495.22889.1 ID=mRNA_M-pyrifera_M_contig99495.22889.1|Name=mRNA_M-pyrifera_M_contig99495.22889.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=609bp|location=Sequence derived from alignment at M-pyrifera_M_contig99495:80..688- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99495:80..688- >mRNA_M-pyrifera_M_contig99495.22889.1 ID=mRNA_M-pyrifera_M_contig99495.22889.1|Name=mRNA_M-pyrifera_M_contig99495.22889.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1188bp|location=Sequence derived from alignment at M-pyrifera_M_contig99495:80..688- (Macrocystis pyrifera P11B4 male)back to top |