mRNA_M-pyrifera_M_contig98959.22760.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig98959.22760.1 vs. uniprot
Match: A0A812MDS0_9DINO (Celsr2 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812MDS0_9DINO) HSP 1 Score: 114 bits (284), Expect = 1.140e-25 Identity = 71/205 (34.63%), Postives = 106/205 (51.71%), Query Frame = 1 Query: 1 CEEGYVGERCSECSGDWYRLGGVCTACPTSQAGFIVLIVGGLLVALXXXXXXXKLGLNLAALTIAVDYFQVLGRFAAFEINWSETSRSVMSLPSVLQLDVEFAAPECFIGR-NYVRDWAFVQSLPLFAAIGLALFHLVWLCTRGWRLPLAK-RSAHVLKRVGEMLLLLQVVYLPLATRSLEVFDC--TQLADGRFVMDASPDIEC 603 C Y G RCS+C+ +YR+ G+C ACP FI L V GL+V + ++LA ++I VDYFQVLG FA+ + W + R + + S+ Q++++ APEC I NY + W ++SLPLF L L +L AK R H V L++ +YL L + + F+C T +DG+ ++ IEC Sbjct: 2389 CAPEYTGVRCSQCAERFYRVAGLCVACPDMAWLFITLFVVGLVVLCCVGYILNRYKVHLAFISIGVDYFQVLGMFASARVEWPQFLRDLYRILSIFQINLDITAPECAIPDVNYAQKWFVIESLPLFLGAMLLLIYLAKTAFDRIMHKAAKHRGTHTPTLVAMGQLMMYYLYLLLTRTTFDAFNCQPTDPSDGKLYLEVD-FIEC 2592
BLAST of mRNA_M-pyrifera_M_contig98959.22760.1 vs. uniprot
Match: A0A812ZFV2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZFV2_9DINO) HSP 1 Score: 102 bits (255), Expect = 7.460e-22 Identity = 64/175 (36.57%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 1 CEEGYVGERCSECSGDWYRLGGVCTACPTSQAGFIVLIVGGLLVALXXXXXXXKLGLNLAALTIAVDYFQVLGRFAAFEINWSETSRSVMSLPSVLQLDVEFAAPECFIGR-NYVRDWAFVQSLPLFAAIGLALFHLVWLCTRGWRLPLA--KRSAHVLKRVGEMLLLLQVVYLP 516 C EGY GERC +C ++RL G C CP +I L V G+LV K +NLA ++I VDY QVL FA +I W +++ SV L+++ AAPEC Y WA + LP+ A L +LV + L +A KR++H+ + VG L + ++YLP Sbjct: 157 CTEGYEGERCGQCVLGFFRLDGECVKCPDLAGLYIALFVIGILVICAGGYWLNKQNINLAFISIGVDYLQVLALFARTKIAWPPVIKNLFRFMSVFNLNIDLAAPECLNPEMQYDVKWAAIMLLPVLIASVFFLVYLVNYLYKRCILKVAAEKRNSHMPQLVGVCLTMFYLLYLP 331
BLAST of mRNA_M-pyrifera_M_contig98959.22760.1 vs. uniprot
Match: A0A812UD31_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812UD31_9DINO) HSP 1 Score: 98.6 bits (244), Expect = 2.410e-20 Identity = 61/196 (31.12%), Postives = 100/196 (51.02%), Query Frame = 1 Query: 1 CEEGYVGERCSECSGDWYRLGGVCTACPTSQ----AGFIVLIVGGLLVALXXXXXXXKLGLNLAALTIAVDYFQVLGRFAAFEINWSETSRSVMSLPSVLQLDVEFAAPECFIGRNYVRDWAFVQSLPLFAAIGLALFHLV-WLCTRGWRLPLAKRSAHVLKRVGEMLLLLQVVYLPLATRSLEVFDC--TQLADG 567 C Y G RCS C+ ++ R+ G C CP + GFI+L++G + VA K +NLA L+I VDYFQVL + W + VM+ SV ++++ EC Y W ++ +PL +AI L +L+ +L + R+P KR H +G ++++ +YL + + ++F+C T+ DG Sbjct: 846 CTPAYDGYRCSLCNTNYRRINGFCEECPDNLWLIITGFILLLIGIIFVA----WFLDKHNVNLALLSIGVDYFQVLAILRNSRVAWPAAIKDVMAFLSVFNVNLDLVGMECIYQTPYWLKWTIIEIIPLASAIILVCVYLILYLYKKIKRVPSEKRHLHADPLIGVFMVIMYYLYLFITRNTFDIFNCSPTEPDDG 1037
BLAST of mRNA_M-pyrifera_M_contig98959.22760.1 vs. uniprot
Match: A0A7S1G944_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G944_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.130e-19 Identity = 69/218 (31.65%), Postives = 98/218 (44.95%), Query Frame = 1 Query: 1 CEEGYVGERCSECSGDWYRLGGVCTACPTSQ-----AGFIVLIVGGLLVALXXXXXXXKLGLNLAALTIAVDYFQVLGRFAAFEINWSETSRSVMSLPSVLQLDVEFAAPECFIGRNYVRDWAFVQSLPLFAAIGLALFHLV----------WLCTRGWRLPLAKRSAHVLKR--VGEMLLLLQVVYLPLATRSLEVFDCTQLADGRFVMDASPDIEC 603 C +GY G+ C+ C+ +YRL C CP + A F+VL++ G + A K +NLA L+I VD+ Q+ F F W E R S+ S L+++ APEC I + + QSLPL I L + +V W R + + +K VG L VY T + VFDC +G+ MDA+P IEC Sbjct: 1330 CADGYDGDACTLCADKYYRLRQECLPCPDTAWLMFLAFFLVLVLLGCIAA-----YLNKKRINLAGLSIGVDFLQISSMFLNFNFTWPEELRIAFSVVSSANLNIDIVAPECAIEWTWPTKFFMTQSLPLVIGIMLIVSWIVADLTARAKAWWQQVRHGMIQSRWGANPSVKDDLVGTGFTALYYVYFVSVTNGIAVFDCNTNTNGQVTMDAAPSIEC 1542
BLAST of mRNA_M-pyrifera_M_contig98959.22760.1 vs. uniprot
Match: A0A0L0DC15_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DC15_THETB) HSP 1 Score: 89.4 bits (220), Expect = 3.900e-17 Identity = 67/226 (29.65%), Postives = 108/226 (47.79%), Query Frame = 1 Query: 1 CEEGYVGERCSECSGD---WYRLGGVCTACP-------TSQAGFIVLIVGGLLVALXXXXXXX-KLGLN---------LAALTIAVDYFQVLGRFAAFEINWSETSRSVMSLPSVLQLDVEFAAPECFIGRNYVRDWAFVQSLPLFAA---IGLALFHLVWLCTRGWRLPLAKRSAHV-LKRVG-EMLLLLQVVYLPLATRSLEVFDCTQLADGRFVMDASPDIEC 603 C GY G C+ECS +YRL C CP ++ + +VL GGLL L K G+ +A ++I ++++Q++ A+F++ W V SVL +V+ A +C + Y W + PL I L LF + LC+ +++R + VG M+ + Y+ L+ +++E FDCTQ ADGR+++DA P +EC Sbjct: 1261 CATGYQGSSCAECSKGTPRYYRLSSRCVKCPDDAWMRWSAFSLVVVLAAGGLLGGLAYFSRSMVKSGIKKYRKSWASRMAVVSIGLNFWQIIAVMASFKLRWPSAVLKVFDFFSVLNFNVDLLATDCSVEYPYAFKWGVTMAAPLLLGTVYIALVLFSRL-LCS-----VVSRRHRGIPWWLVGTSMVTVASFAYMFLSAKAVEFFDCTQQADGRYLLDADPSLEC 1480
BLAST of mRNA_M-pyrifera_M_contig98959.22760.1 vs. uniprot
Match: A0A0L0DCQ0_THETB (Sushi domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DCQ0_THETB) HSP 1 Score: 88.2 bits (217), Expect = 9.520e-17 Identity = 70/227 (30.84%), Postives = 106/227 (46.70%), Query Frame = 1 Query: 1 CEEGYVGERCSECSGDWYRLG--GVCTACPTSQAGFIVL-----------IVGGLLVALXXXXXXX------KLGLNL----AALTIAVDYFQVLGRFAAFEINWSETSRSVMSLPSVLQLDVEFAAPECFIGRNYVRDWAFVQSLPLFAAIGLALFHLVWLCTRGWRL--PLAKRSAHVLKRV-GEMLLLLQVVYLPLATRSLEVFDCTQLADGRFVMDASPDIEC 603 C G++G C+EC+ Y G G C CP S I+L +V L + L K+GL + A L++ + QV+G + + W T+RS M L SV +D+ EC IG ++ ++ F SLPL LA+ + TR L L RS + G + ++ V+Y+P+A +L FDCTQL +G FV+DA ++C Sbjct: 765 CSPGHLGYMCNECA-PGYHTGPSGNCRKCPKSSWALILLXXXXXXXXXXXVVAVLALTLSKQQEHPEGDALLKMGLRVRLIPATLSMTIVAMQVVGMLSESRLGWPTTARSAMRLASVFNIDMRVFGTECTIG-SFHNNYVFSVSLPLMLVAALAVGFFLLKLTRHMLLCKVLRVRSMRAAPFLDGSLFTIMPVLYIPIARTTLVYFDCTQLPNGNFVLDADLGVKC 989
BLAST of mRNA_M-pyrifera_M_contig98959.22760.1 vs. uniprot
Match: A0A812PFA7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PFA7_9DINO) HSP 1 Score: 87.4 bits (215), Expect = 1.660e-16 Identity = 56/204 (27.45%), Postives = 97/204 (47.55%), Query Frame = 1 Query: 1 CEEGYVGE----RCSECSGDWYRLGGVCTACPTSQAGFIVLIVGGLLVALXXXXXXXKLGLNLAALTIAVDYFQVLGRFAAFEINWSETSRSVMSLPSVLQLDVEFAAPECFI-GRNYVRDWAFVQSLPLFAAIGLAL-FHLVWLCTRGWRLPLAKR--SAHVLKRVGEMLLLLQVVYLPLATRSLEVFDC--TQLADGRFVMD 582 C GY RC+ C +++R G+C CP + +++ V + A K +NLA +++ VDYFQVL FA+ + W R + S +++ A PEC + Y++ WA V S P+ L L F +V+L R ++ H + + ++ + V+YL L+ +++F+C T DGR ++ Sbjct: 130 CATGYASRPPLYRCASCDENYFRRAGLCVRCPDAPWVLVLVFVLLAMTAAAFAYWLNKQDINLALVSVGVDYFQVLALFASARVPWPGFLREFFVVLSAFSFNLDIATPECAVPDLGYLQQWALVMSFPVAVGATLLLAFAVVYLYKRCVLRQRGRKHLQGHAPRLIATFIMAMYVLYLYLSRTVMDIFNCVPTDPPDGRLYLE 333
BLAST of mRNA_M-pyrifera_M_contig98959.22760.1 vs. uniprot
Match: A0A7S1GCG6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCG6_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.770e-14 Identity = 62/226 (27.43%), Postives = 96/226 (42.48%), Query Frame = 1 Query: 1 CEEGYVGERCSEC--SGDWYRLGGVCTACPTSQ----AGFIVLIV----GGLLVALXXXXXXXKLGLNLAALTIAVDYFQVLGRFAAFEINWSETSRSVMSLPSVLQLDVEFAAPECFIGRNYVRDWAFVQSLPLFAAIGLAL-FHLVWLCTRGWRLPLAKRSAHVL--------------KRVGEMLLLLQVVYLPLATRSLEVFDCTQLADGRFVMDASPDIEC 603 C Y GE C C S YRL C CP GF ++V GG+ + K +NLAA+TI +D+ QVL F+ ++ W RSV + S L++E APEC + + + W VQS+PL + L W+ + +RS + +G + L Y + ++ VFDC+ +G+ +++ P I C Sbjct: 946 CAPEYTGEACGRCQTSPRHYRLDQECLPCPNLAWLMLVGFFFVLVLLGAGGMYL--------NKRKVNLAAITIGIDFVQVLSVFSGYDFAWPVEIRSVFTTMSAANLNLELVAPECSVNWTFEQKWMVVQSVPLMCVTVVVLGLTARWVGKLAHGVVRGRRSVDMTGGVMGAAGPDETVDSAIGLVFTGLYYCYFVVVKYAMAVFDCSDNDEGKNALESDPSILC 1163
BLAST of mRNA_M-pyrifera_M_contig98959.22760.1 vs. uniprot
Match: A0A0L0DST6_THETB (Sushi domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DST6_THETB) HSP 1 Score: 80.5 bits (197), Expect = 4.100e-14 Identity = 63/229 (27.51%), Postives = 109/229 (47.60%), Query Frame = 1 Query: 1 CEEGYVGERCSECSGDWYRLG-GVCTACPTSQAG------------------FIVLIVGGLLVALXXXXXXXKLGLNLAALTIAVDY------FQVLGRFAAFEINWSETSRSVMSLPSVLQLDVEFAAPECFIGRNYVRDWAFVQSLPLFAAIGLALFHLVWLCTRGWRLP-LAKRSAHVLKRVGEMLLLL--QVVYLPLATRSLEVFDCTQLADGRFVMDASPDIEC 603 C +GY G C+ CS +YR G C ACP + G F+ +V L A K + TI V FQ++ FA + WS++S+ V+S+ S ++ A EC + ++ + +A ++P F +GL + +++ L G + LA A ++ + + +L L ++Y+PL+ SL +FDC+QL +G++V+DA + C Sbjct: 390 CAQGYSGSFCTTCSDGYYRTSDGACKACPPNPGGVFAAVVIALVALSMVGAVFVAWVVMRSLEATNAGEHGQKHIIAFRMRTIPVSISMSLVAFQIVSIFAESNLKWSDSSQRVLSVFSAFNINANVVASECAV-TSFHKMYALSIAIP-FIIVGLVIANMMVLKVLGTAVERLAPLRAVPIRSLVDAVLFLVAPLLYIPLSQSSLALFDCSQLPNGQYVLDADTGVVC 616
BLAST of mRNA_M-pyrifera_M_contig98959.22760.1 vs. uniprot
Match: A0A0L0D8Y9_THETB (Laminin EGF-like domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D8Y9_THETB) HSP 1 Score: 76.6 bits (187), Expect = 9.090e-13 Identity = 55/213 (25.82%), Postives = 95/213 (44.60%), Query Frame = 1 Query: 1 CEEGYVGERCSECSGDWYRLG--GVCTACPTS-QAGFIVLIVGGLLVALXXXXXXXKLGLNLAALTIAVDYFQVLGRFAAF-EINWSETSRSVMSLPSVLQLDVEFAAPECFIGRN---YVRDWAFVQSLPLFAAIGLALFHLVWLCTRGWR-----LPLAKRSAHVLKRVGEMLLLLQVVYLPLATRSLEVFDCTQLADGRFVMDASPDIEC 603 C G+ G RC C+ +Y+ G C CP + A F+VL + + A +I ++ QV+ A+F + + + + + S + +D++ PEC + + Y WA S P AI L +F W C W +P K + + ++ ++YL ++ +LE+F CT+L DG++VMD P + C Sbjct: 553 CLRGHTGFRCGTCASGFYKDADSGHCKDCPRNIVAVFVVLFTCAAIGCVVLVRIARSAHGYFTAASIGFNFLQVISVLASFPRLRLPGSLKQLFRVLSAVNIDLQLFRPECMVSDSKAAYHIIWAIKVSTP---AIMLIIFVAAWGCVWSWAKCRGTMPAEKLQSWKYAFTNASVTMMFILYLMVSNTALEIFPCTRLPDGQYVMDREPSVVC 762 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98959.22760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig98959.22760.1 >prot_M-pyrifera_M_contig98959.22760.1 ID=prot_M-pyrifera_M_contig98959.22760.1|Name=mRNA_M-pyrifera_M_contig98959.22760.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=201bp CEEGYVGERCSECSGDWYRLGGVCTACPTSQAGFIVLIVGGLLVALVLGGback to top mRNA from alignment at M-pyrifera_M_contig98959:1..603- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig98959.22760.1 ID=mRNA_M-pyrifera_M_contig98959.22760.1|Name=mRNA_M-pyrifera_M_contig98959.22760.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=603bp|location=Sequence derived from alignment at M-pyrifera_M_contig98959:1..603- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig98959:1..603- >mRNA_M-pyrifera_M_contig98959.22760.1 ID=mRNA_M-pyrifera_M_contig98959.22760.1|Name=mRNA_M-pyrifera_M_contig98959.22760.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1206bp|location=Sequence derived from alignment at M-pyrifera_M_contig98959:1..603- (Macrocystis pyrifera P11B4 male)back to top |