mRNA_M-pyrifera_M_contig98898.22752.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig98898.22752.1 vs. uniprot
Match: A0A7X5WL30_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WL30_9ACTN) HSP 1 Score: 164 bits (414), Expect = 9.220e-46 Identity = 103/221 (46.61%), Postives = 134/221 (60.63%), Query Frame = 1 Query: 1 GVLLDLDRIDTETVVRLLDGIASRRVLDVVGVEELTG---SATAADADATVGTLVPTPAPDVSELASTLETTTLGVATLARMIEPEFELIEPLVTQLQAAVANDLTPDDAQVYVAGVAADVAEFTSGFEIPDGDRITLTDRRTDLPLTIVNPQPFALNVELLLTAEKIRFPGGDQRDLVLQPGENVVTIPVETLASGDARVTVTLLSPGGFLELGTGSVDI 654 GV+LD+ R+D + +L GI RRVL ++ L G + TA A V L P APD++ LA+ L+ T +A A M+ P + PL L AA + DL P++A Y V V E T G + +GDRITLT R DLPL + N QP + V L+L+AEK+RFP G+++ +VLQPGEN I VETLASGDARVT TL SP G +EL +G VDI Sbjct: 74 GVVLDVTRVDPVALDVVLAGITERRVLRTSTLDRLLGLPPARTATGAPVRVE-LRPDTAPDLTTLAADLQVTRGALAAYAAMVAPADAPVAPLRRLLLAAASTDLDPEEASDYTTAVFDAVLEGTDGIGVVEGDRITLTSRTADLPLVLRNDQPLPVTVTLVLSAEKLRFPDGERQTVVLQPGENPREIRVETLASGDARVTATLTSPDGRIELASGIVDI 293
BLAST of mRNA_M-pyrifera_M_contig98898.22752.1 vs. uniprot
Match: A0A2E0T0B7_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T0B7_9ACTN) HSP 1 Score: 132 bits (332), Expect = 4.600e-32 Identity = 86/220 (39.09%), Postives = 124/220 (56.36%), Query Frame = 1 Query: 1 GVLLDLDRIDTETVVRLLDGIASRRVLDVVGVEELTGSATAADADATV--GTLVPTPAPDVSELASTLETTTLGVATLARMIEPEFELIEPLVTQLQAAVANDLTPDDAQVYVAGVAADVAEFTSGFEIPDGDRITLTDRRTDLPLTIVNPQPFALNVELLLTAEKIRFPGGDQRDLVLQPGENVVTIPVETLASGDARVTVTLLSPGGFLELGTGSVDI 654 G++LDL +D + LLD I + L + V+EL A DA+ V L+ P DV AS L T +A+ M+ P I PL T L+AA++++L D + + V VA T+ F + + R+TL R LP+TI N Q +NV + T+EK+RFP G++ LVL PG N + IPVET+ SGDAR+ +T+ SP G L+L GSV++ Sbjct: 376 GIVLDLTTVDQVPLTLLLDLIEATDRLGLASVDELITRPPARDAEGAVLRVELLSAPPGDVGGAASDLRLTESVLASYTAMVSPADGPIAPLRTVLRAAMSDELDADVHRTFTDTVFDLVAAGTADFAVVESSRVTLATRAATLPVTIHNDQNLTMNVIVRTTSEKLRFPDGEELQLVLAPGLNELEIPVETVTSGDARILITVTSPDGRLDLANGSVNV 595
BLAST of mRNA_M-pyrifera_M_contig98898.22752.1 vs. uniprot
Match: A0A3M2GNV2_ACTSX (Uncharacterized protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GNV2_ACTSX) HSP 1 Score: 104 bits (259), Expect = 3.420e-22 Identity = 78/227 (34.36%), Postives = 112/227 (49.34%), Query Frame = 1 Query: 1 GVLLDLDRIDTETVVRLLDGIASRRVLDVVGVEELTGSATA------ADADATVGTLVPTPAPDVSELASTLETTTLGVATLARMIEPEFEL---IEPLVTQLQAAVANDLTPDDAQVYVAGVAADVAEFTSGFEIPDGDRITLTDRRTDLPLTIVNPQPFALNVELLLTAEKIRFPGGDQRDLVLQPGENVVTIPVETLASGDARVTVTLLSPGGFLELGTGSVDI 654 G+++D D T+ LL G+ + VL V +LT A + V L P P PD+ TT + A +IEP L +EPL ++ AA L Y+A V A + + +G I D R+TLT R +PLTI N + L V L L +EK+RFP G +R ++L+PG N + + V+ +GDAR+ VTL SP G L + +DI Sbjct: 388 GLVVDARSADVVTLDLLLAGLRTATVLRPVTAVDLTRLPPARVDGPDGEGPTLVADLRPGPVPDLRLALFDRRLTTARLDAFASLIEPTGGLDTVVEPLAERIAAADDRSLPDRSRAAYLAAVRAAIDDAVTGVRIVDTGRVTLTAHRASVPLTIANERTQPLAVLLALDSEKLRFPEGAERVVLLEPGVNELAVLVDAPGTGDARLRVTLRSPRGDLVVADAVIDI 614
BLAST of mRNA_M-pyrifera_M_contig98898.22752.1 vs. uniprot
Match: A0A6N9EZS0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EZS0_9ACTN) HSP 1 Score: 85.1 bits (209), Expect = 1.550e-15 Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 256 LIEPLVTQLQAAVANDLTPDDAQVYVAGVAADVAEFTSGFEIPDGDRITLTDRRTDLPLTIVNPQPFALNVELLLTAEKIRFPGGDQRDLVLQPGENVVTIPVETLASGDARVTVTLLSP--GGFLELGTGSVDI 654 L+ PL T L + + LT + ++ V VA+ T+G E IT+T RR DLP+T+VN +P + V L LT++ I F G+ L+PG N + +P+E ASG A V VT+ +P G + L TG+ ++ Sbjct: 479 LVAPLRTLLAVSASRLLTTGERTEFLDAVDQQVAQGTTGVEFLPRGPITVTGRRADLPVTLVNSRPAEVTVALELTSDTISFTRGEISVHTLEPGRNDLLVPIEAAASGRASVLVTVTTPDEAGAITLATGTFNV 613
BLAST of mRNA_M-pyrifera_M_contig98898.22752.1 vs. uniprot
Match: A0A2E6ULF6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E6ULF6_9ACTN) HSP 1 Score: 79.7 bits (195), Expect = 1.110e-13 Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 280 LQAAVANDLTPDDAQVYVAGVAADVAEFTSGFEIPDGDRITLTDRRTDLPLTIVNPQPFALNVELLLTAE-KIRFPGGDQRDLVLQPGENVVTIPVETLASGDARVTVTLLSP 615 L+A VA +++ + + Y+ V V + F PD + +T RR +P T+ N + V L L ++ ++ FP GD D+VLQPG+N + IPV SGDAR+ VT+ SP Sbjct: 496 LEATVATEVSVEAGEAYLRAVYDGVLDVLDAFAAPDDQNVRMTSRRATVPYTVENRLAVPVQVRLHLESDGRLDFPEGDTLDVVLQPGDNRIPIPVGAKTSGDARLQVTVRSP 608
BLAST of mRNA_M-pyrifera_M_contig98898.22752.1 vs. uniprot
Match: A0A6B1E9T1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E9T1_9ACTN) HSP 1 Score: 78.2 bits (191), Expect = 3.790e-13 Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 256 LIEPLVTQLQAAVANDLTPDDAQVYVAGVAADVAEFTSGFEIPDGDRITLTDRRTDLPLTIVNPQPFALNVELLLTAEKIRFPGGDQRDLVLQPGENVVTIPVETLASGDARVTVTLLSP--GGFLELGTGSVDI 654 L+ PL T L + + LT + ++ V VA+ T+G E IT+T RR +LP+T+VN +P V + LTA ++R GG++ L PG N + +PV + + G VTV + +P G + L TG+ + Sbjct: 510 LVAPLRTLLAVSASRLLTTGERTGFLEAVDQQVAQGTTGVEFLPRGPITVTGRRAELPVTLVNSRPSETMVAVELTAHRLRATGGERFVFTLHPGRNDLAVPVVSTSPGSTLVTVLVTTPDEAGAIALTTGTFSV 644
BLAST of mRNA_M-pyrifera_M_contig98898.22752.1 vs. uniprot
Match: A0A6G0A8D6_9ACTN (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A8D6_9ACTN) HSP 1 Score: 66.2 bits (160), Expect = 4.530e-9 Identity = 40/129 (31.01%), Postives = 65/129 (50.39%), Query Frame = 1 Query: 268 LVTQLQAAVANDLTPDDAQVYVAGVAADVAEFTSGFEIPDGDRITLTDRRTDLPLTIVNPQPFALNVELLLTAEKIRFPGGDQRDLVLQPGENVVTIPVETLASGDARVTVTLLSPGGFLELGTGSVDI 654 L L + A LT + Q Y+ V + + S P ITL R LPL++ N F + V L + ++++ FP GD ++LQPG+N +++ V T SG+ + + + SP G L + +DI Sbjct: 487 LAELLLVSGARTLTASERQRYLDTVTSTIEGDLSQIRAPRQRTITLAAREAVLPLSLENRLEFPVEVSLEMDSDQLEFPDGDVMTVLLQPGDNRLSLKVTTRTSGEFPLVIEVTSPDGSLPVTLIDLDI 615 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98898.22752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig98898.22752.1 >prot_M-pyrifera_M_contig98898.22752.1 ID=prot_M-pyrifera_M_contig98898.22752.1|Name=mRNA_M-pyrifera_M_contig98898.22752.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp GVLLDLDRIDTETVVRLLDGIASRRVLDVVGVEELTGSATAADADATVGTback to top mRNA from alignment at M-pyrifera_M_contig98898:42..695+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig98898.22752.1 ID=mRNA_M-pyrifera_M_contig98898.22752.1|Name=mRNA_M-pyrifera_M_contig98898.22752.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig98898:42..695+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig98898:42..695+ >mRNA_M-pyrifera_M_contig98898.22752.1 ID=mRNA_M-pyrifera_M_contig98898.22752.1|Name=mRNA_M-pyrifera_M_contig98898.22752.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1308bp|location=Sequence derived from alignment at M-pyrifera_M_contig98898:42..695+ (Macrocystis pyrifera P11B4 male)back to top |