mRNA_M-pyrifera_M_contig9888.22749.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9888.22749.1
Unique NamemRNA_M-pyrifera_M_contig9888.22749.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig9888.22749.1 vs. uniprot
Match: D8LEZ3_ECTSI (Vac14_Fig4_bd domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ3_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 4.330e-99
Identity = 161/186 (86.56%), Postives = 174/186 (93.55%), Query Frame = 1 
Query:   19 REIKSSSLVEFGPMVGILVGHCNSKERFNRLTAVQWVHEFIKLGGERLVLFFSDLLGAITHCISDIDQVVRERAGEANKDLLELVQGSSQAFELSPLLKTLKVELLSHDVPTRMAALEWINMLLEKSPSDMSRFIQELLPSLLNALTDSADNVVLMNLQVLARISLNGEHFSHVLEEILELFSRQR 576
            +EI++SS V+FGPMV ILVGHCNSK+RFNRLTAVQWVHEFIKLGGERLVLFF +LLGAI+HCISD D VVRERAGEANKDLLELVQGSS+ FELSPLLKTLKV LLSH VPT+MAAL+WINMLLEKSPSDM RFIQELLPSLLNALTDSAD+VVLMNLQVLARISLN E F+HVLEEIL+LFS QR
Sbjct:  250 KEIQASSFVDFGPMVPILVGHCNSKDRFNRLTAVQWVHEFIKLGGERLVLFFWELLGAISHCISDTDPVVRERAGEANKDLLELVQGSSEEFELSPLLKTLKVGLLSHHVPTKMAALKWINMLLEKSPSDMGRFIQELLPSLLNALTDSADDVVLMNLQVLARISLNEEQFNHVLEEILQLFSDQR 435
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BLAST of mRNA_M-pyrifera_M_contig9888.22749.1 vs. uniprot
Match: A0A835YJ67_9STRA (Vacuolar protein 14 C-terminal Fig4p binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ67_9STRA)

HSP 1 Score: 229 bits (584), Expect = 2.080e-68
Identity = 116/186 (62.37%), Postives = 146/186 (78.49%), Query Frame = 1 
Query:   19 REIKSSSLVEFGPMVGILVGHCNSKERFNRLTAVQWVHEFIKLGGERLVLFFSDLLGAITHCISDIDQVVRERAGEANKDLLELVQGSSQAFELSPLLKTLKVELLSHDVPTRMAALEWINMLLEKSPSDMSRFIQELLPSLLNALTDSADNVVLMNLQVLARISLNGEHFSHVLEEILELFSRQR 576
            REIK S+ VE+GPMV ILVG CNSKER NRLTA+ WV EFI LGGERL+LF+SDLL AI  CISD +  +   AG+ N+DLLELV+G+S+ FELSPLL++L  EL S  VPTRMAAL W+NMLLEK+P++M R+I++LLP+LL+ L+D +D VVL+NLQVLARI L    F  VL  I+++F+  R
Sbjct:  254 REIKESAFVEYGPMVSILVGQCNSKERSNRLTAITWVQEFIALGGERLLLFYSDLLSAIMQCISDPEDDICAVAGQTNRDLLELVRGTSRGFELSPLLQSLTAELSSDHVPTRMAALHWLNMLLEKAPAEMGRYIEDLLPALLHTLSDESDEVVLLNLQVLARIGLAQSEFQRVLNSIMDVFTEDR 439
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BLAST of mRNA_M-pyrifera_M_contig9888.22749.1 vs. uniprot
Match: F0YIP2_AURAN (Vac14_Fig4_bd domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIP2_AURAN)

HSP 1 Score: 228 bits (581), Expect = 1.110e-67
Identity = 120/186 (64.52%), Postives = 144/186 (77.42%), Query Frame = 1 
Query:   22 EIKSSSLVEFGPMVGILVGHCNSKERFNRLTAVQWVHEFIKLGGERLVLFFSDLLGAITHCISDIDQVVRERAGEANKDLLELVQGSSQAFELSPLLKTLKVELLSHDVPTRMAALEWINMLLEKSPSDMSRFIQELLPSLLNALTDSADNVVLMNLQVLARISL-NGEHFSHVLEEILELFSRQR 576
            EIK S++VEFGPMVGILV  C +KERFNRLTA+ WV EFIKLGG RL+LF+S+LLGAI HCISD D  +R+ AG  N DLL LV+ +++ FELSPLL+TL +EL SH +PTRMAAL WINMLLEK   +M++FI ELLP+LL  L+D AD VVL NL+VLARISL N   F  VL  I+ LF+  R
Sbjct:  253 EIKKSTVVEFGPMVGILVSQCRNKERFNRLTAITWVQEFIKLGGSRLLLFYSELLGAIMHCISDSDTEIRQVAGYTNVDLLRLVKSTTEEFELSPLLQTLTMELDSHHIPTRMAALRWINMLLEKVRGEMNKFISELLPALLKTLSDEADEVVLTNLEVLARISLLNDCEFQRVLHAIVNLFAEDR 438
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BLAST of mRNA_M-pyrifera_M_contig9888.22749.1 vs. uniprot
Match: A0A7S2AJR5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJR5_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.990e-67
Identity = 107/159 (67.30%), Postives = 128/159 (80.50%), Query Frame = 1 
Query:   19 REIKSSSLVEFGPMVGILVGHCNSKERFNRLTAVQWVHEFIKLGGERLVLFFSDLLGAITHCISDIDQVVRERAGEANKDLLELVQGSSQAFELSPLLKTLKVELLSHDVPTRMAALEWINMLLEKSPSDMSRFIQELLPSLLNALTDSADNVVLMNLQ 495
            RE K S++VEFGPMV ILV  CNSKERFNRLTA+ WV EFI LGG RL+LF+S+LLGAI HCISD DQ +R  AG+ N+DLL LV  +++ FELSPLL+TL  EL SH +PTRMA L WINMLLEK+P DM++FI ELLP+LL  L+D AD VVL+NL+
Sbjct:   18 RETKQSAVVEFGPMVSILVSQCNSKERFNRLTAITWVQEFINLGGNRLLLFYSELLGAIMHCISDSDQEIRGVAGQTNQDLLVLVNETTKDFELSPLLQTLTRELTSHHIPTRMAVLRWINMLLEKAPQDMNKFIGELLPALLKTLSDEADEVVLLNLK 176
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BLAST of mRNA_M-pyrifera_M_contig9888.22749.1 vs. uniprot
Match: F0YQT7_AURAN (Vac14_Fig4_bd domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQT7_AURAN)

HSP 1 Score: 218 bits (554), Expect = 5.790e-66
Identity = 119/194 (61.34%), Postives = 147/194 (75.77%), Query Frame = 1 
Query:   22 EIKSSSLVEFGPMVGILVGHCNSKERFNRLTAVQWVHEFIKLGGERLVLFFSDLLGAITHCISDIDQVVRERAGEANKDLLELVQGSSQAFELSPLLKTLKVELLSHDVPTRMAALEWINMLLEKSPSDMSRFIQELLPSLLNALTDSADNVVLMNL--------QVLARISLNGE-HFSHVLEEILELFSRQR 576
            EIK S +VEFGPMVGILV  C++KERFNRLTA+ WV EFIKLGG+RL+LF+S+LLG+I +CISD D  +R+ AG  N +LL+LV+ ++  FELSPLL+TL  EL SH +PTRMAAL WINMLLEK   +M++FI ELLP+LL+ L+D AD VVL NL        QVLARISL  +  F  VL+ IL+LFS  R
Sbjct:   43 EIKKSPVVEFGPMVGILVNQCHNKERFNRLTAITWVKEFIKLGGDRLLLFYSELLGSIMYCISDSDLEIRQVAGYTNVELLDLVKQTANEFELSPLLQTLTSELGSHYIPTRMAALRWINMLLEKVAGEMNKFISELLPALLSTLSDEADEVVLTNLEVFLSFFTQVLARISLLSDAEFKRVLDAILQLFSEDR 236
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BLAST of mRNA_M-pyrifera_M_contig9888.22749.1 vs. uniprot
Match: A0A8J2SHG9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHG9_9STRA)

HSP 1 Score: 213 bits (543), Expect = 3.710e-62
Identity = 114/186 (61.29%), Postives = 138/186 (74.19%), Query Frame = 1 
Query:   22 EIKSSSLVEFGPMVGILVGHCNSKERFNRLTAVQWVHEFIKLGGERLVLFFSDLLGAITHCISDIDQVVRERAGEANKDLLELVQGSSQAFELSPLLKTLKVELLSHDVPTRMAALEWINMLLEKSPSDMSRFIQELLPSLLNALTDSADNVVLMNLQVLARISL-NGEHFSHVLEEILELFSRQR 576
            EIK S LVE  PMVGILV  C  KER NRLTA+ WV +FIKLGG +L+LF+SDLLGAI HCISD+D  +R+ AG  N DLL+ V+ + + FELSPLL+TL  EL SH +PTRMA L WINMLLEK+P +M  FI ELLP+LL  L+D AD VVL NL+VLA+ISL + + F  VL  I+ LF+  R
Sbjct:  247 EIKRSKLVELCPMVGILVDQCRHKERSNRLTAMIWVRDFIKLGGHKLLLFYSDLLGAIMHCISDVDIEIRQVAGHTNIDLLKFVKTTKEHFELSPLLQTLTTELDSHYIPTRMATLRWINMLLEKAPGEMKNFISELLPALLKTLSDEADEVVLTNLEVLAQISLLHNQEFQRVLNAIVCLFAEDR 432
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BLAST of mRNA_M-pyrifera_M_contig9888.22749.1 vs. uniprot
Match: A0A2P4XIT2_9STRA (VAC14 family protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XIT2_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.310e-60
Identity = 110/186 (59.14%), Postives = 139/186 (74.73%), Query Frame = 1 
Query:   19 REIKSSSLVEFGPMVGILVGHCNSKERFNRLTAVQWVHEFIKLGGERLVLFFSDLLGAITHCISDIDQVVRERAGEANKDLLELVQGSSQAFELSPLLKTLKVELLSHDVPTRMAALEWINMLLEKSPSDMSRFIQELLPSLLNALTDSADNVVLMNLQVLARISLNGEHFSHVLEEILELFSRQR 576
            REIK +  VEFG MV ILVG CNSKERFNRLTAV WV EF+ LG E+LV F++DLL AI HCISD +  +R+ A  AN DLL+LV+ +++  EL PL++ L +EL S  VPTRMAAL WI+MLLEK P+ +S  I +LLP+LL  L+D +D+VVL++L+VLARISLN   F  VL  IL LF++ R
Sbjct:  316 REIKQTEDVEFGRMVDILVGQCNSKERFNRLTAVSWVQEFVNLGREKLVEFYADLLAAIMHCISDAEHEIRQVAERANDDLLQLVKSTTEDVELLPLMQKLTLELSSDHVPTRMAALRWISMLLEKYPNQLSAHIGQLLPALLRTLSDISDSVVLLDLEVLARISLNKVEFEKVLNAILLLFAQDR 501
[Close]
BLAST of mRNA_M-pyrifera_M_contig9888.22749.1 vs. uniprot
Match: W2QV08_PHYPN (Vac14_Fig4_bd domain-containing protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QV08_PHYPN)

HSP 1 Score: 205 bits (522), Expect = 2.140e-60
Identity = 110/186 (59.14%), Postives = 138/186 (74.19%), Query Frame = 1 
Query:   19 REIKSSSLVEFGPMVGILVGHCNSKERFNRLTAVQWVHEFIKLGGERLVLFFSDLLGAITHCISDIDQVVRERAGEANKDLLELVQGSSQAFELSPLLKTLKVELLSHDVPTRMAALEWINMLLEKSPSDMSRFIQELLPSLLNALTDSADNVVLMNLQVLARISLNGEHFSHVLEEILELFSRQR 576
            REIK +  VEFG MV ILVG CNSKERFNRLTAV WV EF+ LG E+LV F++DLL AI HCISD +  +R+ A  AN DLL+LV+ +++  EL PL++ L  EL S  VPTRMAAL WI+MLLEK P+ +S  I +LLP+LL  L+D +D+VVL++L+VLARISLN   F  VL  IL LF++ R
Sbjct:   71 REIKQTEDVEFGRMVDILVGQCNSKERFNRLTAVSWVQEFVNLGREKLVEFYADLLAAIMHCISDAEHEIRQVAERANDDLLQLVKSTTEDVELLPLMQKLTTELSSDHVPTRMAALRWISMLLEKYPNQLSAHIGQLLPALLRTLSDISDSVVLLDLEVLARISLNKVEFEKVLNAILLLFAQDR 256
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BLAST of mRNA_M-pyrifera_M_contig9888.22749.1 vs. uniprot
Match: A0A8K1CS78_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS78_PYTOL)

HSP 1 Score: 209 bits (532), Expect = 3.350e-60
Identity = 108/186 (58.06%), Postives = 140/186 (75.27%), Query Frame = 1 
Query:   19 REIKSSSLVEFGPMVGILVGHCNSKERFNRLTAVQWVHEFIKLGGERLVLFFSDLLGAITHCISDIDQVVRERAGEANKDLLELVQGSSQAFELSPLLKTLKVELLSHDVPTRMAALEWINMLLEKSPSDMSRFIQELLPSLLNALTDSADNVVLMNLQVLARISLNGEHFSHVLEEILELFSRQR 576
            REIK +  V+FG MV ILVG CNSKERFNRLTA+ WVHEF+ LG ERLV F+++LL AI HCISD +  +R+ A  AN DLL+LV+ + +  +L+PL+  L  EL+S  VPTRMAAL WI+MLLEK+P+ +S  I  LLP+LL  L+D +D VVL++L+VLARISLN + F  VL  IL+LF++ R
Sbjct:  283 REIKQTDHVDFGRMVDILVGQCNSKERFNRLTAITWVHEFVNLGKERLVAFYAELLAAIMHCISDAEHEIRQVAERANDDLLQLVKSTEEDMDLTPLMTKLNSELVSDHVPTRMAALRWISMLLEKAPNQLSDHIGTLLPTLLKTLSDISDAVVLLDLEVLARISLNEKEFERVLNAILQLFAQDR 468
[Close]
BLAST of mRNA_M-pyrifera_M_contig9888.22749.1 vs. uniprot
Match: M4B5T4_HYAAE (Vac14_Fig4_bd domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5T4_HYAAE)

HSP 1 Score: 207 bits (527), Expect = 2.860e-59
Identity = 110/186 (59.14%), Postives = 140/186 (75.27%), Query Frame = 1 
Query:   19 REIKSSSLVEFGPMVGILVGHCNSKERFNRLTAVQWVHEFIKLGGERLVLFFSDLLGAITHCISDIDQVVRERAGEANKDLLELVQGSSQAFELSPLLKTLKVELLSHDVPTRMAALEWINMLLEKSPSDMSRFIQELLPSLLNALTDSADNVVLMNLQVLARISLNGEHFSHVLEEILELFSRQR 576
            REIK +  VEFG MV ILVG CNSKERFNRLTAV WVHEF+ LG E+LV +++DLL AI HCISD +  +R+ A  AN DLL+LV+ +++  EL PL++ L +EL S  VPTRMAAL WI+MLLEK P+ +S  I +LLP+LL  L+D +D+VVL++L+VLARISLN   F  VL  IL LF++ R
Sbjct:  353 REIKQTEDVEFGRMVDILVGQCNSKERFNRLTAVSWVHEFVNLGREKLVEYYADLLAAIMHCISDAEHEIRQVAERANDDLLQLVKSTTEDVELLPLMQKLTLELSSDHVPTRMAALRWISMLLEKYPNQLSAHIGQLLPALLRTLSDISDSVVLLDLEVLARISLNKFEFEKVLNAILLLFAQDR 538
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9888.22749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ3_ECTSI4.330e-9986.56Vac14_Fig4_bd domain-containing protein n=2 Tax=Ec... [more]
A0A835YJ67_9STRA2.080e-6862.37Vacuolar protein 14 C-terminal Fig4p binding-domai... [more]
F0YIP2_AURAN1.110e-6764.52Vac14_Fig4_bd domain-containing protein (Fragment)... [more]
A0A7S2AJR5_9STRA2.990e-6767.30Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
F0YQT7_AURAN5.790e-6661.34Vac14_Fig4_bd domain-containing protein (Fragment)... [more]
A0A8J2SHG9_9STRA3.710e-6261.29Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2P4XIT2_9STRA1.310e-6059.14VAC14 family protein n=2 Tax=Phytophthora palmivor... [more]
W2QV08_PHYPN2.140e-6059.14Vac14_Fig4_bd domain-containing protein n=6 Tax=Ph... [more]
A0A8K1CS78_PYTOL3.350e-6058.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4B5T4_HYAAE2.860e-5959.14Vac14_Fig4_bd domain-containing protein n=1 Tax=Hy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9888contigM-pyrifera_M_contig9888:3569..10395 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score310.8
Seed ortholog evalue4.3e-82
Seed eggNOG ortholog2880.D8LEZ3
Preferred nameVAC14
KEGG koko:K10875,ko:K15305
KEGG Pathwayko03440,ko05166,ko05203,map03440,map05166,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000306,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005942,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0007154,GO:0007165,GO:0007267,GO:0008047,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009628,GO:0009893,GO:0009987,GO:0010008,GO:0010562,GO:0012505,GO:0016020,GO:0019207,GO:0019209,GO:0019220,GO:0019222,GO:0019637,GO:0019898,GO:0023052,GO:0030154,GO:0030234,GO:0030674,GO:0031090,GO:0031312,GO:0031323,GO:0031325,GO:0031410,GO:0031901,GO:0031902,GO:0031982,GO:0031984,GO:0032502,GO:0032991,GO:0033674,GO:0035032,GO:0038023,GO:0042325,GO:0042327,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0045165,GO:0045168,GO:0045937,GO:0046331,GO:0046474,GO:0046486,GO:0046488,GO:0048518,GO:0048522,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051174,GO:0051338,GO:0051347,GO:0051716,GO:0060089,GO:0060090,GO:0061695,GO:0065007,GO:0065009,GO:0070772,GO:0071704,GO:0090407,GO:0097708,GO:0098588,GO:0098772,GO:0098791,GO:0098796,GO:0098805,GO:0098852,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.phosphatidylinositol biosynthetic process
EggNOG OGsKOG0212@1,KOG0212@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Exons5
Model size579
Cds size579
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9888.22749.1prot_M-pyrifera_M_contig9888.22749.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9888 3569..10395 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816905.5740094-CDS-M-pyrifera_M_contig9888:3568..36521622816905.5740094-CDS-M-pyrifera_M_contig9888:3568..3652Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9888 3569..3652 -
1692278247.5399806-CDS-M-pyrifera_M_contig9888:3568..36521692278247.5399806-CDS-M-pyrifera_M_contig9888:3568..3652Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9888 3569..3652 -
1622816905.5882897-CDS-M-pyrifera_M_contig9888:4434..45691622816905.5882897-CDS-M-pyrifera_M_contig9888:4434..4569Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9888 4435..4569 -
1692278247.554567-CDS-M-pyrifera_M_contig9888:4434..45691692278247.554567-CDS-M-pyrifera_M_contig9888:4434..4569Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9888 4435..4569 -
1622816905.6038675-CDS-M-pyrifera_M_contig9888:7113..71971622816905.6038675-CDS-M-pyrifera_M_contig9888:7113..7197Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9888 7114..7197 -
1692278247.5657625-CDS-M-pyrifera_M_contig9888:7113..71971692278247.5657625-CDS-M-pyrifera_M_contig9888:7113..7197Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9888 7114..7197 -
1622816905.6214619-CDS-M-pyrifera_M_contig9888:9201..93271622816905.6214619-CDS-M-pyrifera_M_contig9888:9201..9327Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9888 9202..9327 -
1692278247.5835187-CDS-M-pyrifera_M_contig9888:9201..93271692278247.5835187-CDS-M-pyrifera_M_contig9888:9201..9327Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9888 9202..9327 -
1622816905.635914-CDS-M-pyrifera_M_contig9888:10245..103951622816905.635914-CDS-M-pyrifera_M_contig9888:10245..10395Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9888 10246..10395 -
1692278247.600542-CDS-M-pyrifera_M_contig9888:10245..103951692278247.600542-CDS-M-pyrifera_M_contig9888:10245..10395Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9888 10246..10395 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9888.22749.1

>prot_M-pyrifera_M_contig9888.22749.1 ID=prot_M-pyrifera_M_contig9888.22749.1|Name=mRNA_M-pyrifera_M_contig9888.22749.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
MRLCVSREIKSSSLVEFGPMVGILVGHCNSKERFNRLTAVQWVHEFIKLG
GERLVLFFSDLLGAITHCISDIDQVVRERAGEANKDLLELVQGSSQAFEL
SPLLKTLKVELLSHDVPTRMAALEWINMLLEKSPSDMSRFIQELLPSLLN
ALTDSADNVVLMNLQVLARISLNGEHFSHVLEEILELFSRQR*
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mRNA from alignment at M-pyrifera_M_contig9888:3569..10395-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9888.22749.1 ID=mRNA_M-pyrifera_M_contig9888.22749.1|Name=mRNA_M-pyrifera_M_contig9888.22749.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6827bp|location=Sequence derived from alignment at M-pyrifera_M_contig9888:3569..10395- (Macrocystis pyrifera P11B4 male)
ATGCGCTTGTGCGTGAGCAGGGAGATTAAGTCGTCGTCGCTGGTGGAGTT
CGGGCCTATGGTGGGTATTCTGGTGGGGCACTGCAACTCCAAGGAGCGCT
TCAATCGTCTCACAGCGGTGCAGTGGGTGCACGAGTTCATCAAGCTAGGG
GTGCGTCACTGATTGGCTTGGTTTGGCTTGGTTTTGACTTGGTTTTGCTA
TGCTTTGCTTTGCTTTGCTTTGCCTTGCTTTGTTTTGCTTTGCTCTGCTC
TGCTCTGCTCTCGTGCCGCCTGCGCTGCTGCACGAGTACGTACATGCGCG
GTAATTATTTCCCCTCTGAAGTTCATCTTCGATAGGTGACGCTGCCGGCT
CTGTTTTTTTTTTTTTTTTCGGGGTGGGGGTTGGCTGTTGGGCACGTGCG
TACTCTTACAGTGATTGGTCCTACCCGTTATATGGACATTGTGACTGTCC
CTGGTGTTGTTATGGCCTCGAAGTCCTCCTATTAATACCCGGTACGTGAC
AACGCGCTGATCCACCGAAAAACGTTCGATTTTTCATACCAGGCACGTAC
CTGGTGCCTGGTGTGGGTATCGGTAGCGGCACGTGTCATACTAATAGTAG
ACACATGTTTTCTCGCCAGTAGAGATTCGGCGCATGTCTATGACCGGTCA
CGTGCAGACGCCACCGCTGCGCATGCGGATGTATGTCGATGTAGCCAGGG
CTCTTCACGGGTCATGAGCCGGCCCGCGGGTCGGGTTCGGGAGGTCTTCA
AAATCTCGCGGGTTCGGGTCAGGTCGGGTCGGGTTGGCATGGGTCAGGAG
GTTTTCCAAATCGCACGGGAAGGGTCAGGTCACCTTGACCCGACCCGACC
CGACCCATGAGTTACAGCCGTGGTTAGAACCGTGTCTCTGCGTGATTCCC
TCACCGCGCGTCTTTCGCTGCGCTCGGAGTAATACCTACCAGGATACCAG
GTACCAGGTAAGAAACATGAACCCCCCCCCCGGCATCACCGTGTAACGTT
GCCCCCCCCCCCCCCCCGTTTTTTGTATGCACCCAATTTTCCCGGACTCG
TGTGTGTGACAACCACAGGGTGAGCGGCTGGTGCTCTTTTTCTCCGACCT
GCTGGGCGCAATCACGCACTGCATCAGCGACATCGACCAAGTGGTTCGCG
AGCGCGCTGGCGAGGCCAACAAGGATCTCCTTGAGCTCGTGCAGGTGAGC
TGTTATTACGGAGTACCATGGTAAATAAGACCAAATATTATAAGAAAAAA
TAGTTGAATATATAGGTTTTTATGTATACCATAGGTCCTATTAACTATGG
ACCCCCGTAATAGTATGCACCTGGTACGTTTTTTTTTTGCAAGAGCAGTA
TTAATAGTGCCCCTCCAGCAGTGTATACGACTCGGCCAGGAGAGCTTGCC
ACTTATTCGAGAACGTGGTCTACGCACAGAAAGTGCGCTCAGAGATAATA
TGCAGACTCGGAGGCAAGCAGGCAGGGATGAACGTATGCGGGTGCGAGGC
TCCGCGCGGAGTACCGACATACCTGGTGACACCAGTACATTCGTGATGGG
CGACGCCTGCGGGGGGTGTCATGCCGCAACCAGAGCCGAAAAAACAAAGT
TTCCAACGACGACTTGGGGGGGAACTTGAAAAATATCTATTACGGGGAAC
CATAGTAAATAAGACCTACGGTACACACGAAAACCTATACATTTATCTAT
ATTTACCAACAACATTTGGTCCTATTTACTATGGTCCCTCGTAATAACAG
TTTTACGGTTTTATCCCTGTCGAGACTTGGGAGGCGATAAGAAACGAAAC
AAACAAGAAAATAAAGACAATCACACCATCGGCCCACGCAAGCAGCCCGG
TGCCGCTGGCTCTCGGACGATACATGAGAGGATGAATCAAACATTTATTA
TATTGTGTGCCGGCAGTACAATCAGACTGCAAGGAAATGTACCAGCCACG
CATCGGACAGATGATCCACAGATCATCTACAGATAGATAGATAAATAGAT
AGATTACTACAGATAGATAGGTAGATTATGATCTACATTTTTCACGGGCA
GATAGATCGATTCCCGATCTGTATATATCATGCACAGCTCATGTTGCCGG
GTGGAAGTCGTATATACAATCTGCATGGGACCACATAAAACCCGTAGTAC
GCGTGATCGAATTGACACACACAGCTTGCGAAGATAAGTTTGGACGAAAG
CTTGTTCTTTAATTTGATACATCGAATCTGCATGATCAACTGCAGGACAG
GTTTCCTGGGTTGGATCTGCACTATACATATTCTGAATCTGTGCCATACA
GATCCTGCACAGCATGTCTGTATGAACTACAGATAGATCGTGATCTATCT
GTCTGACACGGTCCTGAATATACATATATACGTTTACTCTTTGCAAACGA
GGCGTTCTACGATAGAGGTTCGCCCTAAAATTTCTGAGGCTCCTTCCTCA
CTTAAAGAGCTCCATACCTGACCCGAAACCTGATTTCAGCACAAATCAAC
TTGCATCCCGATGAATAATCCCATGGCCCAAGTATACAAAAACGTCATTT
GAAAAAAAAAATGACATTCCGACGAATTTTTTGAGTCAAGGAACCCCGTC
ATTCAGAAAAAAAATAACGGAAATGTGCTACCTCTATCGTAGAACGCGTC
AAGAAACTTTTTTTTTATATAAGGTATCTCTCGCTATAATATATACCGGT
ATAGGAACTCGCGTTGCTGGATACCACCACTCTGGGTGGAAATATTAGGA
CCGCTGGATACTCATATTAGTGTCTAAACGGTTCTTATAAATCCGGCCAG
AGTAGTAGATGTAACTGTCCGTGATCTGTGTTTACTGGTAGCGGCAGCGC
AACAAAAACAGACAGCAAGCCAAAAACTTTTTTTCGGGGCTGCAACTTTT
TTTCTTTTTTTTTTTTCGGTCGGAACGTTTCAGCGTTCCGGCTTTTACCC
ACCCACCCTAGTAAAAAGTACAGCATGCCCTATATATATATACGTGGCGC
TTCGCTCGTAGTACCTCCACACTGCTGTCATGAGAAATTTCGAGTATGAA
GCAGTATGCCCTAGAAGCGTGGGGGCGGAGGGAGTTCCACAAATGATTTT
TCACATCAGTAGCTGATGTGTTGTTTTTTTCTTCGCCTCTGTTTTGACGT
GTGGACTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTTGGAAAGGG
ATCGAGCCAAGCGTTCGAGCTCAGCCCGCTGCTGAAGACGCTCAAGGTGG
AGCTCCTGAGTCACGATGTGCCCACCAGGATGGTGAGAGTGGGCTCAACA
AATCAAGCGAAAAATATCGGGGGGGGGGCGGGGGGGGGGGCGGGGTTCGG
TGGCATTCGAATTTTGGCGGCTAAACTAAACGGCCGCTGCGCCCCGATGT
GGTTGATCGCTGCACTCCTGCCTTTGCTACTGCTGGAAAGCATAGCAGTC
AGAACGTACTCGTACTATTAATCTATTAATGCTACTGCTTTAGTTGGTAA
TATGGTACCAGGCATGCGCACATAGGGGTCCATCATGGGTCATGAGCACT
AACCCCCGTGGCAGTAGAGCAGGTATAGCGGGCCTGAAAATGTTGGATTT
TGACGGGTAAACAAAGCGCAGCTGACGTGTTTCTTTGTATTATACAATTT
TTGGTACAAACGTCCGTGAGTACGTTGGTTGGTTTCGCCGTCCGGCCGAT
CCACTGGGGGATTCTGACGGGGGAATAAATCAAACGACTATGGTTGATAT
CGGCTCACATTGGATCTTGAAGGGTATTGCGCCACCTGCCCGTTGGTTGA
TTTCGGCGTGCTGCATGTGCTCGCTTGTACATACTGACATACTGACTGTA
TGAGTTCATGCATGTCATACCTACGTGTTAGATGTATGTAGTTAAATACA
CAAGGTTCCCCTTCGGGATGTGGTTGACTTGAGATCTCGGAGGTTTCCCA
AGTTGAAAAGGGGGAGCATCATCACCATCAGGCGTCCTCATTTAGCTCCG
AGTGCTGCTGCTGTATACTGCTTGCTGTGTGGCAGGATGAGAGGTTCGAC
GGCGTGTGTTTGATTTTGAATTATACCACGTGGAAACGAAGAATACACCG
TATGATGGTCGCCTGTATCTCCTGGTGAACAACTGTAGTAGTGTACACAC
ATACCAGGTACATATGAATATAGACGGATACAAGAGCACCGCGGCTGTCA
CACAACAAGCCGAAGTATGAAGAAGCGTTTTTGCCGTGGTACCGATGTAC
CGCTGCTGCTGCGTATTGTAGTGCGCACCGTGGCTTCACAGTTGCTTTTG
AAATCGGGAGCGTGGGTTCGTATCGTCGTCCTGCCCCCTGCGCAGCATGC
AATTAATTGTACGTTGCTTGAGATAACATAAATCTGTTTATGTGTTCGTT
CCTACTTCCTACTGTAGGCCGACAGGAAACAAACTGGTACGCGCACGCAC
ACACATTATTAATGCACCGTCCGTGACCTTCGCCGAAAGGAAGAGCCTGG
TGTGCGACTGCTGTTGTTCCGTGACTACCTGTTTTATGTATAGCAGTGGG
ATTATTCTCTAAAAAAGAACCTGGTAGCCTTCTGTTCAGTTGCAAAAAAA
TCCTGGTCGGTGGTATCGCTGCCCACAGGAGTGTACCTGGTAATTATTTT
TTAGGCTCGCAGAGGCCATCCTGGTCAGTACATTTATAACGCGCCGGAAT
CCACAATAATCGCTATATTAATAGTAGTATATGATCCGTGTCAATACTAA
ATGCGCGCAAGTGTAACTCGCGACATGTCCACATCAAAACACGGCAAGCT
CTGCCGAGTGCCAGCGCAGACATGCGCAGACCGACCGGCCCACTCGTCCA
CACGCGCGTACACGCAGCACCCACAAGCGTACGTCATGTTCACACACACA
TTTACGTAGTGTCCGTTTCTTCAAGAACGGGAAACGCTTGAAGCGAGTGC
TGTATACCGTGTGGTTATCAACTTGATAGCAGCGTCGAAAAAAAAAAAAC
TGATGTGGTGAGGAAAAATGGAAATGTGGGGTTTGCATATTCCTGGCAGG
CTCTGGCTCGGCGGAAACAGATCCCGTAGTTACTTGCTAGTTTTCGCGAC
TTTGAACCCCCGAATCACGCGCCACGCACCTCGGCCAGAGGGTCCAAACT
TGAGTCGTGTGTACACGCGGGCCTCCTGCGTGCCCCGTGGCCGAGAGCAC
GATAAACGACCTCCGGCCGAAAGAGAAAGAAATGCCGATGTGGAAAAAAA
AATAACTTGATACATTTACGTACATTTACGTGACGACGTGCGATCTATGC
TCTTGGCGTCGCTGTCGAGCGATCGCTGTGTGTGCTTCTGGTGGGTTTTG
TAGTTTTGTCGTGCGGTGATGCTACATATAAGCTGCTATTAATAGGGCTT
TTGCTGGTGCATTTCTAAAGACGACCTCGGCGCTACGTATTTGTTGCTGT
TGTTGTTGTTGGTCTCACATTGGATTGTTTTGCACACCTCGGATAGATGA
GATAGATCATTCCCACAGTTCATGATCTGGGACCTTCGGGGCAGATAGAT
AGATTAATTCCTGATCTGCATGATCTGTATGATCTAGCTCATGTTGCGGG
GTGGGAGCCGTAACATCTACATGATCTATAGTACTATGCAGATCCCGCAC
AGCCTCTCACAACGACTGGTGAGGAACTAGATCACCTACAGTAGATATAC
AGGTATAGATAGATCATGATCTATCTGAGCTGTTCGTGGTGTAGATCATG
ATCATTGCATAATCTAGTCCGTGGTCACGATATACTTTGTATTCCATGCC
GTGCATATGCCTTATACCCACCGCAGGCGGCCTTGGAGTGGATCAACATG
CTGCTGGAGAAGTCGCCTTCCGACATGAGCCGCTTCATCCAGGAGCTGCT
CCCGTCGCTGCTCAACGCCCTCACCGACAGCGCTGACAATGTTGTGCTAA
TGAACTTGCAGGTCAGGGCAGGAGATAGCGGGGGAGATGGGGGAAGGGGA
AAAGAGGAGAGGGGGAGGAGAGGAGAGAGAAGGGCAGAGCGAAGCTTTGC
GGGTTCTGCGCCGCCTTCGCTCGTTTTTTTTTTTTGGTCTACCTGCTTTC
TCTGACCGACTACAAGGGCTGCATGTTTTTGGTGCGTGTTCTTGTCATCC
AATATCCGTGGCGCAAAAATCGGTGGCTTGTGTTCTGAGGGTTGGCGTTG
AAAGTCTTTCGATCGCGTTGTGGCTAGCCCGGGGCGTCGACTGTCGGCGT
GTACGGTTTCAGCCTTTGGCGTACGGCGCCATTCTCCTCACCCACACGTT
GTTCCGAAGCAGTTTACTGCGGAGCTCCTGCCCGACGAGGTCCCTGCGCT
GCGACAGCACAGCCGTATATAGCAAGGCTCTTCGCAGGTCATGACCCGAC
CCGCAGGTCGGGTTAGGGAGTTTTCGAAATATCACGAGTCGGGTCGGGTC
AAGCCGGGTCGGGTTGGTTCAGGAGGTTACAATCGGACTGGGTCGGGTCG
GTTCAGGAGGCCACAAATGGATCGGGTCGGGTCGGGGATATCCCTTACTG
TACCCGGGCCCATCTGACCCGCGAGGTTTGGCTCGACCCTTGACCCTGAT
ATTTATCAATGTGATCGGGGATACAAGGTACTTGTGTAGCTGTGGAGGCC
CTCGAAGCGTACCTTATATGTTCGATGAGACTGGTAGCTTCAGACAGCTG
TCGAATAGCGCGCCGCTTTTGCCATCAACTTCCCGCTTTGCAGGTGCTCG
CACGCATCTCGTTGAACGGGGAGCACTTCAGCCACGTTCTGGAGGAGATT
CTGGAGCTGTTTTCAAGGCAGCGGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig9888:3569..10395-

>mRNA_M-pyrifera_M_contig9888.22749.1 ID=mRNA_M-pyrifera_M_contig9888.22749.1|Name=mRNA_M-pyrifera_M_contig9888.22749.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig9888:3569..10395- (Macrocystis pyrifera P11B4 male)
ATGCGCTTGTGCGTGAGCAGGGAGATTAAGTCGTCGTCGCTGGTGGAGTT
CGGGCCTATGGTGGGTATTCTGGTGGGGCACTGCAACTCCAAGGAGCGCT
TCAATCGTCTCACAGCGGTGCAGTGGGTGCACGAGTTCATCAAGCTAGGG
ATGCGCTTGTGCGTGAGCAGGGAGATTAAGTCGTCGTCGCTGGTGGAGTT
CGGGCCTATGGTGGGTATTCTGGTGGGGCACTGCAACTCCAAGGAGCGCT
TCAATCGTCTCACAGCGGTGCAGTGGGTGCACGAGTTCATCAAGCTAGGG
GGTGAGCGGCTGGTGCTCTTTTTCTCCGACCTGCTGGGCGCAATCACGCA
CTGCATCAGCGACATCGACCAAGTGGTTCGCGAGCGCGCTGGCGAGGCCA
ACAAGGATCTCCTTGAGCTCGTGCAGGGTGAGCGGCTGGTGCTCTTTTTC
TCCGACCTGCTGGGCGCAATCACGCACTGCATCAGCGACATCGACCAAGT
GGTTCGCGAGCGCGCTGGCGAGGCCAACAAGGATCTCCTTGAGCTCGTGC
AGGGATCGAGCCAAGCGTTCGAGCTCAGCCCGCTGCTGAAGACGCTCAAG
GTGGAGCTCCTGAGTCACGATGTGCCCACCAGGATGGGATCGAGCCAAGC
GTTCGAGCTCAGCCCGCTGCTGAAGACGCTCAAGGTGGAGCTCCTGAGTC
ACGATGTGCCCACCAGGATGGCGGCCTTGGAGTGGATCAACATGCTGCTG
GAGAAGTCGCCTTCCGACATGAGCCGCTTCATCCAGGAGCTGCTCCCGTC
GCTGCTCAACGCCCTCACCGACAGCGCTGACAATGTTGTGCTAATGAACT
TGCAGGCGGCCTTGGAGTGGATCAACATGCTGCTGGAGAAGTCGCCTTCC
GACATGAGCCGCTTCATCCAGGAGCTGCTCCCGTCGCTGCTCAACGCCCT
CACCGACAGCGCTGACAATGTTGTGCTAATGAACTTGCAGGTGCTCGCAC
GCATCTCGTTGAACGGGGAGCACTTCAGCCACGTTCTGGAGGAGATTCTG
GAGCTGTTTTCAAGGCAGCGGTGAGTGCTCGCACGCATCTCGTTGAACGG
GGAGCACTTCAGCCACGTTCTGGAGGAGATTCTGGAGCTGTTTTCAAGGC
AGCGGTGA
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