mRNA_M-pyrifera_M_contig98796.22735.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig98796.22735.1 vs. uniprot
Match: A0A7S0WT91_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WT91_9CHLO) HSP 1 Score: 67.8 bits (164), Expect = 1.150e-11 Identity = 49/116 (42.24%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 1 MAKRAVAFRSSPPADWDALVSGVFERSCLFLVATLGPTSFLLREETGGEGDGKGVFVGHRHTCSQCFRDKPAPR-----ICRHLCFALHRVLRIPHTNPLCFQLSLTDAEVDRVLR 333 M +R +R PP + ++ V + + L+LV +GPTSFL+RE+ G E K V +G R CS C PA +C HL F + +VLR+P +NPL +QLSLTD E++ VLR Sbjct: 1 MGERLAPWRPRPPQEVLEVLQQVPD-TVLYLVHRIGPTSFLVRED-GSEIKRK-VTIGSRPCCS-C--TPPAANGGCKELCLHLLFVMVKVLRVPPSNPLVWQLSLTDRELEEVLR 110
BLAST of mRNA_M-pyrifera_M_contig98796.22735.1 vs. uniprot
Match: A0A835SYL6_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SYL6_9CHLO) HSP 1 Score: 69.7 bits (169), Expect = 1.440e-11 Identity = 52/114 (45.61%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 1 MAKRAVAFRSSPPADWDALVSGVFERSCLFLVATLGPTSFLLREETGGEGDGKGVFVGHRHTCSQCFRDKP---APRICRHLCFALHRVLRIPHTNPLCFQLSLTDAEVDRVLR 333 MA+RA +RS P D L+ V LFLV GPTSF++REE G E K V +G R TCS C P +C H F + +VLR+P NPL +QLSL+D E++ VLR Sbjct: 1 MAERAAPWRSKPSQDVVELLQRVGAVQ-LFLVQRPGPTSFVVREE-GSEVKRK-VQIGSRITCS-CSPVGPNGTCKELCLHTLFVMVKVLRVPVGNPLLWQLSLSDRELEEVLR 110
BLAST of mRNA_M-pyrifera_M_contig98796.22735.1 vs. uniprot
Match: A0A7S4E3C9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3C9_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.420e-11 Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = 1 Query: 73 ERSCLFLVATLGPTSFLLREETGGEGDGKG---------VFVGHRHTCSQCFRDKPAPRICRHLCFALHRVLRIPHTNPLCFQLSLTDAEVDRVLR 333 ER + LV+T GPTSF++ E+ +GD V +GHRH+CS C +C H F L +VLR+P NPL FQ SL ++E++ VLR Sbjct: 64 ERRRMLLVSTTGPTSFVVAEQNAPDGDEASERPAREKHRVKIGHRHSCS-CGHLGDG-ELCHHALFILLKVLRVPKDNPLAFQTSLLESELEAVLR 157
BLAST of mRNA_M-pyrifera_M_contig98796.22735.1 vs. uniprot
Match: A0A8J2X2M5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2M5_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.510e-11 Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = 1 Query: 73 ERSCLFLVATLGPTSFLLREETGGEGDGKG---------VFVGHRHTCSQCFRDKPAPRICRHLCFALHRVLRIPHTNPLCFQLSLTDAEVDRVLR 333 ER + LV+T GPTSF++ E+ +GD V +GHRH+CS C +C H F L +VLR+P NPL FQ SL ++E++ VLR Sbjct: 41 ERRRMLLVSTTGPTSFVVAEQNAPDGDEASERPAREKHRVKIGHRHSCS-CGHLGDG-ELCHHALFILLKVLRVPKDNPLAFQTSLLESELEAVLR 134
BLAST of mRNA_M-pyrifera_M_contig98796.22735.1 vs. uniprot
Match: A0A835W3V1_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W3V1_CHLIN) HSP 1 Score: 67.4 bits (163), Expect = 9.280e-11 Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 1 MAKRAVAFRSSPPADWDALVSGVFERSCLFLVATLGPTSFLLREETGGEGDGKGVFVGHRHTCS--QCFRDKPAPRICRHLCFALHRVLRIPHTNPLCFQLSLTDAEVDRVLR 333 MA+RA +RS P + L+ V LFLV GPTSF++REE G E K V +G R TCS + +C H F + +VLR+P NPL +QLSL+D E++ VLR Sbjct: 1 MAERAAPWRSKPSQEVVELLQRVGAVQ-LFLVQRPGPTSFVVREE-GSEVKRK-VQIGSRITCSCSAVGANGTCKELCLHTLFVMVKVLRVPVGNPLLWQLSLSDRELEEVLR 110
BLAST of mRNA_M-pyrifera_M_contig98796.22735.1 vs. uniprot
Match: A0A7S2IQM4_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2IQM4_9DINO) HSP 1 Score: 63.9 bits (154), Expect = 1.130e-10 Identity = 45/111 (40.54%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 1 MAKRAVAFRSSPPADWDALVSGVFERSCLFLVATLGPTSFLLREETGGEGDGKG-VFVGHRHTCSQCFRDKPAPRICRHLCFALHRVLRIPHTNPLCFQLSLTDAEVDRVL 330 MA R +R P ++ V ++S F++ +GPT F+LR+E GD K FVG H+CS C R C H F L +VL++P +PLC+Q SLTDAE+ VL Sbjct: 1 MAGRLKPYRRKPTDAFEK-VRDQAQQSRFFVLQQIGPTGFVLRDE----GDQKHRAFVGAEHSCS-CGRC--GDEHCVHTAFVLLKVLKVPPDSPLCWQPSLTDAEIGEVL 103
BLAST of mRNA_M-pyrifera_M_contig98796.22735.1 vs. uniprot
Match: A8J911_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J911_CHLRE) HSP 1 Score: 67.0 bits (162), Expect = 1.190e-10 Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 1 MAKRAVAFRSSPPADWDALVSGVFERSCLFLVATLGPTSFLLREETGGEGDGKGVFVGHRHTCS--QCFRDKPAPRICRHLCFALHRVLRIPHTNPLCFQLSLTDAEVDRVLR 333 MA+RA +RS P + L+ V LFLV GPTSF++REE G E K V +G R TCS + +C H F + +VLR+P NPL +QLSL+D E++ VLR Sbjct: 1 MAERAAPWRSKPSQEVVELLQRVGAVQ-LFLVQRPGPTSFVVREE-GSEVKRK-VQIGSRITCSCSAVGANGTCKELCLHSLFVMVKVLRVPVGNPLLWQLSLSDRELEEVLR 110
BLAST of mRNA_M-pyrifera_M_contig98796.22735.1 vs. uniprot
Match: A0A2K3DP53_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DP53_CHLRE) HSP 1 Score: 67.0 bits (162), Expect = 1.270e-10 Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 1 MAKRAVAFRSSPPADWDALVSGVFERSCLFLVATLGPTSFLLREETGGEGDGKGVFVGHRHTCS--QCFRDKPAPRICRHLCFALHRVLRIPHTNPLCFQLSLTDAEVDRVLR 333 MA+RA +RS P + L+ V LFLV GPTSF++REE G E K V +G R TCS + +C H F + +VLR+P NPL +QLSL+D E++ VLR Sbjct: 1 MAERAAPWRSKPSQEVVELLQRVGAVQ-LFLVQRPGPTSFVVREE-GSEVKRK-VQIGSRITCSCSAVGANGTCKELCLHSLFVMVKVLRVPVGNPLLWQLSLSDRELEEVLR 110
BLAST of mRNA_M-pyrifera_M_contig98796.22735.1 vs. uniprot
Match: A0A8J4GQW1_9CHLO (Uncharacterized protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GQW1_9CHLO) HSP 1 Score: 66.6 bits (161), Expect = 1.700e-10 Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 1 MAKRAVAFRSSPPADWDALVSGVFERSCLFLVATLGPTSFLLREETGGEGDGKGVFVGHRH--TCSQCFRDKPAPRICRHLCFALHRVLRIPHTNPLCFQLSLTDAEVDRVLR 333 MA+R +RS P + L+ V LFLV GPTSF++REE G E K V +G R +CS + +C H+ F + +VLR+P +NPL +QLSL+D E++ VLR Sbjct: 1 MAERVSPWRSKPSQEVVDLLQQVGTLQ-LFLVQRPGPTSFIVREE-GSEVKRK-VQIGSRMICSCSPVGANGTCKELCLHILFVMVKVLRVPVSNPLLWQLSLSDRELEEVLR 110
BLAST of mRNA_M-pyrifera_M_contig98796.22735.1 vs. uniprot
Match: A0A7S1WBF6_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WBF6_ALECA) HSP 1 Score: 63.9 bits (154), Expect = 5.570e-10 Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 76 RSCLFLVATLGPTSFLLREETGGEGDGKGVFVGHRHTCS--QCFRDKPAPRICRHLCFALHRVLRIPHTNPLCFQLSLTDAEVDRVL 330 +S F++ +GPT F+LR+ GE FVG H+CS +C + C H F L +VL++P NPLC+Q SLTDAE+ VL Sbjct: 21 QSRFFVLQQIGPTGFVLRD---GEDHKHRAFVGAEHSCSCGRCGEEH-----CVHTAFVLLKVLKVPPDNPLCWQPSLTDAEIGEVL 99 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98796.22735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig98796.22735.1 >prot_M-pyrifera_M_contig98796.22735.1 ID=prot_M-pyrifera_M_contig98796.22735.1|Name=mRNA_M-pyrifera_M_contig98796.22735.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp MAKRAVAFRSSPPADWDALVSGVFERSCLFLVATLGPTSFLLREETGGEGback to top mRNA from alignment at M-pyrifera_M_contig98796:71..463- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig98796.22735.1 ID=mRNA_M-pyrifera_M_contig98796.22735.1|Name=mRNA_M-pyrifera_M_contig98796.22735.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=393bp|location=Sequence derived from alignment at M-pyrifera_M_contig98796:71..463- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig98796:71..463- >mRNA_M-pyrifera_M_contig98796.22735.1 ID=mRNA_M-pyrifera_M_contig98796.22735.1|Name=mRNA_M-pyrifera_M_contig98796.22735.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig98796:71..463- (Macrocystis pyrifera P11B4 male)back to top |