mRNA_M-pyrifera_M_contig98787.22733.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig98787.22733.1
Unique NamemRNA_M-pyrifera_M_contig98787.22733.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig98787.22733.1 vs. uniprot
Match: D7G287_ECTSI (Putative serine esterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G287_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 8.060e-16
Identity = 45/109 (41.28%), Postives = 61/109 (55.96%), Query Frame = 1 
Query:   37 LPTHLVVFQHGLGGLPLSMDVLRQATIAVHGEKVLAHLALSNSGPMGIVSAQLITADGIDKGGRRLAEEVVSLLDENPTISKLSFVSLSLGGLYSRYAIGCLLEYEKSG 363
            LP HLVV  HGL G P  +  L+Q+     G ++L H A  N G          T DG+ +GG RLAEE++ ++   P++S++S V  SLGGLY RYA   L   E +G
Sbjct:   62 LPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGK---------TKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYVRYAAKLLYRDETTG 161
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BLAST of mRNA_M-pyrifera_M_contig98787.22733.1 vs. uniprot
Match: A0A6H5LMX6_9PHAE (DUF676 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMX6_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.120e-15
Identity = 45/109 (41.28%), Postives = 61/109 (55.96%), Query Frame = 1 
Query:   37 LPTHLVVFQHGLGGLPLSMDVLRQATIAVHGEKVLAHLALSNSGPMGIVSAQLITADGIDKGGRRLAEEVVSLLDENPTISKLSFVSLSLGGLYSRYAIGCLLEYEKSG 363
            LP HLVV  HGL G P  +  L+Q+     G ++L H A  N G          T DG+ +GG RLAEE+  ++   P++S++S V  SLGGLY+RYA   L   E +G
Sbjct:   94 LPAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGK---------TKDGVVEGGSRLAEEIREVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTG 193
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BLAST of mRNA_M-pyrifera_M_contig98787.22733.1 vs. uniprot
Match: A0A540L1Y1_MALBA (DUF676 domain-containing protein n=4 Tax=Maleae TaxID=721813 RepID=A0A540L1Y1_MALBA)

HSP 1 Score: 80.5 bits (197), Expect = 3.430e-15
Identity = 46/115 (40.00%), Postives = 67/115 (58.26%), Query Frame = 1 
Query:   40 PTHLVVFQHGLGGLPLSMDVLRQATIAVHGEKVLAHLALSNSGPMGIVSAQLITADGIDKGGRRLAEEVVSLLDENPTISKLSFVSLSLGGLYSRYAIGCLLEYEKSGEWPGEEG 384
            PTHL++  +GL G   +     +  +  + E V+AH +  NS         ++T DG+D  G RLAEEV+S++  +P++ K+SFV  SLGGL +RYAIG L E   +GE   E G
Sbjct:   89 PTHLIILVNGLIGSAENWKYAAKEFLKRYPEDVVAHCSECNS--------SMLTFDGVDVMGERLAEEVISVIKRHPSVQKISFVGHSLGGLIARYAIGRLYERNITGELSQENG 195
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BLAST of mRNA_M-pyrifera_M_contig98787.22733.1 vs. uniprot
Match: A0A498JAA9_MALDO (DUF676 domain-containing protein n=3 Tax=Maleae TaxID=721813 RepID=A0A498JAA9_MALDO)

HSP 1 Score: 79.0 bits (193), Expect = 1.340e-14
Identity = 46/115 (40.00%), Postives = 67/115 (58.26%), Query Frame = 1 
Query:   40 PTHLVVFQHGLGGLPLSMDVLRQATIAVHGEKVLAHLALSNSGPMGIVSAQLITADGIDKGGRRLAEEVVSLLDENPTISKLSFVSLSLGGLYSRYAIGCLLEYEKSGEWPGEEG 384
            PTHL++  +GL G   +     +  +  + E V+AH +  NS         ++T DG+D  G RLAEEV+S++  +P++ K+SFV  SLGGL +RYAIG L E   +GE   E G
Sbjct:   89 PTHLIILVNGLIGSAENWKYAAKEFLKRYPEDVVAHCSECNS--------SMLTFDGVDVMGERLAEEVISVIKCHPSVQKISFVGHSLGGLIARYAIGRLYERNITGELSQENG 195
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BLAST of mRNA_M-pyrifera_M_contig98787.22733.1 vs. uniprot
Match: A0A7S0DN61_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DN61_9EUKA)

HSP 1 Score: 77.4 bits (189), Expect = 3.680e-14
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 1 
Query:   40 PTHLVVFQHGLGGLPLSMDVLRQATIAVHGEKVLAHLALSNSGPMGIVSAQLITADGIDKGGRRLAEEVVSLLDENPTISKLSFVSLSLGGLYSRYAIGCLLEYEK 357
            PT + +  HGLGG P  +  L Q  +       + HLA  NS      ++ L+T DG+ KGG+RL+EE+ +L+   P+++++S V  SLGG+Y RYA+G L ++ K
Sbjct:   61 PTDIYILVHGLGGRPGDLSYL-QRCLKRQNPTAIVHLARCNS------ASPLMTFDGVRKGGQRLSEEIKTLVASYPSLTRISLVGNSLGGIYCRYAMGLLYDHRK 159
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BLAST of mRNA_M-pyrifera_M_contig98787.22733.1 vs. uniprot
Match: A0A804M387_MAIZE (DUF676 domain-containing protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A804M387_MAIZE)

HSP 1 Score: 73.9 bits (180), Expect = 1.050e-13
Identity = 45/105 (42.86%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:   40 PTHLVVFQHGLGGLPLSMDVLRQATIAVHGEKVLAHLALSNSGPMGIVSAQLITADGIDKGGRRLAEEVVSLLDENPTISKLSFVSLSLGGLYSRYAIGCLLEYE 354
            PTHLVV  +G+ G   +     +  I  H E V+ H +  NS           T DG+D  GRRLA+EV S++D  P + K+SFV+ SLGGL +RYAI  L E E
Sbjct:   53 PTHLVVTVNGIVGSAENWRFAAKHFIKKHPEDVVVHCSGCNSAAR--------TFDGVDVMGRRLADEVASIVDSRPELCKISFVAHSLGGLIARYAIALLYESE 149
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BLAST of mRNA_M-pyrifera_M_contig98787.22733.1 vs. uniprot
Match: M5XYJ4_PRUPE (DUF676 domain-containing protein n=8 Tax=Prunus TaxID=3754 RepID=M5XYJ4_PRUPE)

HSP 1 Score: 76.3 bits (186), Expect = 1.070e-13
Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = 1 
Query:   40 PTHLVVFQHGLGGLPLSMDVLRQATIAVHGEKVLAHLALSNSGPMGIVSAQLITADGIDKGGRRLAEEVVSLLDENPTISKLSFVSLSLGGLYSRYAIGCLLEYEKSGEWPGEEG 384
            PTHL++  +GL G   +     +  +  + E V+ H +  N          ++T DG+D  G RLAEEV+S++  +P++ K+SFV  SLGGL +RYAIG L E + + E   E G
Sbjct:   79 PTHLIIMVNGLIGSAQNWKYAAKQFLKRYPEDVIVHCSECN--------CSMLTFDGVDVMGERLAEEVISVIKRHPSVQKISFVGHSLGGLIARYAIGRLYERDLTREQSQENG 185
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BLAST of mRNA_M-pyrifera_M_contig98787.22733.1 vs. uniprot
Match: A0A6I9SXK9_SESIN (uncharacterized protein LOC105159074 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9SXK9_SESIN)

HSP 1 Score: 76.3 bits (186), Expect = 1.100e-13
Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 1 
Query:   37 LPTHLVVFQHGLGGLPLSMDVLRQATIAVHGEKVLAHLALSNSGPMGIVSAQLITADGIDKGGRRLAEEVVSLLDENPTISKLSFVSLSLGGLYSRYAIGCLLEYE---KSGEWPGEEG 384
            LPTHLVV  +G+ G   +     +  +  +   VL H + SNS         ++T DG+D  G+RLA+EV+S+++ +P + K+SFV  SLGGL +RYAI  L   +   K GE  GE G
Sbjct:   91 LPTHLVVMVNGIIGSAQNWRYAAKQFVKAYPNDVLVHCSESNS--------SMLTFDGVDVMGKRLADEVISVVNRHPNLQKISFVGHSLGGLIARYAIAELHRRDLMSKPGEENGEYG 201
[Close]
BLAST of mRNA_M-pyrifera_M_contig98787.22733.1 vs. uniprot
Match: A0A5N5GUQ0_9ROSA (Lipase C4A8.10 n=2 Tax=Pyrus TaxID=3766 RepID=A0A5N5GUQ0_9ROSA)

HSP 1 Score: 76.3 bits (186), Expect = 1.130e-13
Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 1 
Query:   40 PTHLVVFQHGLGGLPLSMDVLRQATIAVHGEKVLAHLALSNSGPMGIVSAQLITADGIDKGGRRLAEEVVSLLDENPTISKLSFVSLSLGGLYSRYAIGCLLEYEKSGEWPGEEG 384
            PTHL++  +GL G   +     +  +  + E V+AH +  N          ++T DG+D  G RLAEEV+S++  +P++ K+SFV  SLGGL +RYAIG L E + + E   E G
Sbjct:  104 PTHLIILVNGLIGSAENWKYAAKQFLKRYPEDVIAHCSECNY--------SMLTFDGVDVMGERLAEEVISVIKRHPSVQKISFVGHSLGGLIARYAIGRLYERDITEELSQENG 210
[Close]
BLAST of mRNA_M-pyrifera_M_contig98787.22733.1 vs. uniprot
Match: A0A498HT21_MALDO (DUF676 domain-containing protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498HT21_MALDO)

HSP 1 Score: 76.3 bits (186), Expect = 1.260e-13
Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 1 
Query:   40 PTHLVVFQHGLGGLPLSMDVLRQATIAVHGEKVLAHLALSNSGPMGIVSAQLITADGIDKGGRRLAEEVVSLLDENPTISKLSFVSLSLGGLYSRYAIGCLLEYEKSGEWPGEEG 384
            PTHL++  +GL G   +     +  +  + E V+AH +  N          ++T DG+D  G RLAEEV+S++  +P++ K+SFV  SLGGL +RYAIG L E + + E   E G
Sbjct:   92 PTHLIILVNGLIGSAENWKYAAKQFLKRYPEDVIAHCSECNY--------SMLTFDGVDVMGERLAEEVISVIKRHPSVQKISFVGHSLGGLIARYAIGRLYERDITEELSQENG 198
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98787.22733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G287_ECTSI8.060e-1641.28Putative serine esterase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5LMX6_9PHAE1.120e-1541.28DUF676 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A540L1Y1_MALBA3.430e-1540.00DUF676 domain-containing protein n=4 Tax=Maleae Ta... [more]
A0A498JAA9_MALDO1.340e-1440.00DUF676 domain-containing protein n=3 Tax=Maleae Ta... [more]
A0A7S0DN61_9EUKA3.680e-1438.68Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A804M387_MAIZE1.050e-1342.86DUF676 domain-containing protein n=1 Tax=Zea mays ... [more]
M5XYJ4_PRUPE1.070e-1337.39DUF676 domain-containing protein n=8 Tax=Prunus Ta... [more]
A0A6I9SXK9_SESIN1.100e-1339.50uncharacterized protein LOC105159074 n=1 Tax=Sesam... [more]
A0A5N5GUQ0_9ROSA1.130e-1338.26Lipase C4A8.10 n=2 Tax=Pyrus TaxID=3766 RepID=A0A5... [more]
A0A498HT21_MALDO1.260e-1338.26DUF676 domain-containing protein n=1 Tax=Malus dom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98787contigM-pyrifera_M_contig98787:313..696 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score82.0
Seed ortholog evalue2e-13
Seed eggNOG ortholog2880.D7G287
KEGG koko:K02737
KEGG Pathwayko03050,map03050
KEGG ModuleM00340
Hectar predicted targeting categoryother localisation
EggNOG free text desc.acylglycerol lipase activity
EggNOG OGsKOG4372@1,KOG4372@2759
Ec32 ortholog descriptionputative serine esterase
Ec32 orthologEc-16_002070.1
EC3.4.25.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
Exons1
Model size384
Cds size354
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816904.788463-UTR-M-pyrifera_M_contig98787:312..3421622816904.788463-UTR-M-pyrifera_M_contig98787:312..342Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig98787 313..342 +
1692278247.0677545-UTR-M-pyrifera_M_contig98787:312..3421692278247.0677545-UTR-M-pyrifera_M_contig98787:312..342Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig98787 313..342 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816904.801076-CDS-M-pyrifera_M_contig98787:342..6961622816904.801076-CDS-M-pyrifera_M_contig98787:342..696Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98787 343..696 +
1692278247.079655-CDS-M-pyrifera_M_contig98787:342..6961692278247.079655-CDS-M-pyrifera_M_contig98787:342..696Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98787 343..696 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98787.22733.1prot_M-pyrifera_M_contig98787.22733.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig98787 343..696 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig98787.22733.1

>prot_M-pyrifera_M_contig98787.22733.1 ID=prot_M-pyrifera_M_contig98787.22733.1|Name=mRNA_M-pyrifera_M_contig98787.22733.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp
MSLPTHLVVFQHGLGGLPLSMDVLRQATIAVHGEKVLAHLALSNSGPMGI
VSAQLITADGIDKGGRRLAEEVVSLLDENPTISKLSFVSLSLGGLYSRYA
IGCLLEYEKSGEWPGEEG
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mRNA from alignment at M-pyrifera_M_contig98787:313..696+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig98787.22733.1 ID=mRNA_M-pyrifera_M_contig98787.22733.1|Name=mRNA_M-pyrifera_M_contig98787.22733.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig98787:313..696+ (Macrocystis pyrifera P11B4 male)
ACGTGGCCCATACCACACTCATCCCTTCCCATGTCCCTTCCTACGCACTT
GGTGGTGTTCCAGCATGGTTTGGGGGGATTGCCATTGAGTATGGATGTGT
TGCGTCAGGCAACGATTGCTGTACACGGAGAGAAAGTGTTGGCCCATCTT
GCATTGTCAAATTCTGGACCAATGGGGATTGTTTCAGCGCAACTAATAAC
AGCAGACGGAATTGATAAAGGTGGTCGACGACTTGCTGAAGAGGTGGTTA
GCTTACTGGACGAAAACCCCACCATTTCGAAGCTGTCCTTCGTTTCCCTC
TCTCTAGGCGGTCTCTACTCACGTTATGCCATTGGATGTCTGCTAGAATA
CGAGAAGAGTGGAGAGTGGCCTGGGGAGGAGGGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig98787:313..696+

>mRNA_M-pyrifera_M_contig98787.22733.1 ID=mRNA_M-pyrifera_M_contig98787.22733.1|Name=mRNA_M-pyrifera_M_contig98787.22733.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig98787:313..696+ (Macrocystis pyrifera P11B4 male)
ATGTCCCTTCCTACGCACTTGGTGGTGTTCCAGCATGGTTTGGGGGGATT
GCCATTGAGTATGGATGTGTTGCGTCAGGCAACGATTGCTGTACACGGAG
AGAAAGTGTTGGCCCATCTTGCATTGTCAAATTCTGGACCAATGGGGATT
GTTTCAGCGCAACTAATAACAGCAGACGGAATTGATAAAGGTGGTCGACG
ACTTGCTGAAGAGGTGGTTAGCTTACTGGACGAAAACCCCACCATTTCGA
AGCTGTCCTTCGTTTCCCTCTCTCTAGGCGGTCTCTACTCACGTTATGCC
ATTGGATGTCTGCTAGAATACGAGAAGAGTGGAGAGTGGCCTGGGGAGGA
GGGGATGTCCCTTCCTACGCACTTGGTGGTGTTCCAGCATGGTTTGGGGG
GATTGCCATTGAGTATGGATGTGTTGCGTCAGGCAACGATTGCTGTACAC
GGAGAGAAAGTGTTGGCCCATCTTGCATTGTCAAATTCTGGACCAATGGG
GATTGTTTCAGCGCAACTAATAACAGCAGACGGAATTGATAAAGGTGGTC
GACGACTTGCTGAAGAGGTGGTTAGCTTACTGGACGAAAACCCCACCATT
TCGAAGCTGTCCTTCGTTTCCCTCTCTCTAGGCGGTCTCTACTCACGTTA
TGCCATTGGATGTCTGCTAGAATACGAGAAGAGTGGAGAGTGGCCTGGGG
AGGAGGGG
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