mRNA_M-pyrifera_M_contig98785.22732.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig98785.22732.1
Unique NamemRNA_M-pyrifera_M_contig98785.22732.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig98785.22732.1 vs. uniprot
Match: A0A6A6JAV0_9PLEO (Uncharacterized protein n=1 Tax=Westerdykella ornata TaxID=318751 RepID=A0A6A6JAV0_9PLEO)

HSP 1 Score: 71.6 bits (174), Expect = 4.900e-13
Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 1
Query:    4 RYACERPGCNRRFAHPSSRKDHMASHTGERPHKCDVPGCGKAFTAKANLTRHKRDVH 174
            RY C  P CN+ F+ PSS + H  SHTGE+P+KC  PGCGKAF+ ++N+ RH+R  H
Sbjct:  352 RYIC--PTCNKAFSRPSSLRIHSHSHTGEKPYKCQQPGCGKAFSVRSNMKRHERGCH 406          
BLAST of mRNA_M-pyrifera_M_contig98785.22732.1 vs. uniprot
Match: A0A7C8ICV6_9PLEO (Uncharacterized protein n=1 Tax=Massariosphaeria phaeospora TaxID=100035 RepID=A0A7C8ICV6_9PLEO)

HSP 1 Score: 70.1 bits (170), Expect = 1.510e-12
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query:    4 RYACERPGCNRRFAHPSSRKDHMASHTGERPHKCDVPGCGKAFTAKANLTRHKRDVHKIA 183
            RY C    CN+ F+ PSS + H  SHTGE+P+KC+ PGCGKAF+ ++N+ RH+R  H  A
Sbjct:  294 RYICST--CNKAFSRPSSLRIHSHSHTGEKPYKCEQPGCGKAFSVRSNMKRHERGCHASA 351          
BLAST of mRNA_M-pyrifera_M_contig98785.22732.1 vs. uniprot
Match: A0A090CFA3_PODAN (Uncharacterized protein n=2 Tax=Podospora TaxID=5144 RepID=A0A090CFA3_PODAN)

HSP 1 Score: 69.3 bits (168), Expect = 2.500e-12
Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 1
Query:    4 RYACERPGCNRRFAHPSSRKDHMASHTGERPHKCDVPGCGKAFTAKANLTRHKRDVH 174
            RY C  P CN+ F+ PSS + H  SHTGE+P KC V GCGKAF+ ++N+ RH+R  H
Sbjct:  256 RYIC--PTCNKAFSRPSSLRIHSHSHTGEKPFKCPVAGCGKAFSVRSNMKRHERGCH 310          
BLAST of mRNA_M-pyrifera_M_contig98785.22732.1 vs. uniprot
Match: A0A4P9XIJ2_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XIJ2_9FUNG)

HSP 1 Score: 63.2 bits (152), Expect = 6.940e-12
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 1
Query:   28 CNRRFAHPSSRKDHMASHTGERPHKCDVPGCGKAFTAKANLTRHKR 165
            C +RFA PS+ + HM +H+GERPH C  PGCG+ F+ ++NLTRH R
Sbjct:    4 CQKRFARPSALRLHMRTHSGERPHACPHPGCGRRFSVQSNLTRHLR 49          
BLAST of mRNA_M-pyrifera_M_contig98785.22732.1 vs. uniprot
Match: A0A1M8A1G4_MALS4 (Similar to S.cerevisiae protein CMR3 (Putative zinc finger protein) n=1 Tax=Malassezia sympodialis (strain ATCC 42132) TaxID=1230383 RepID=A0A1M8A1G4_MALS4)

HSP 1 Score: 67.8 bits (164), Expect = 1.120e-11
Identity = 28/55 (50.91%), Postives = 41/55 (74.55%), Query Frame = 1
Query:   28 CNRRFAHPSSRKDHMASHTGERPHKCDVPGCGKAFTAKANLTRHKRD--VHKIAP 186
            CN+RF+ PSS + H+ SHTGE+P +CD PGCG+ F+ ++NL RH+R   +  I+P
Sbjct:  340 CNKRFSRPSSLRTHIHSHTGEKPFRCDAPGCGRCFSVQSNLRRHQRSHSISSISP 394          
BLAST of mRNA_M-pyrifera_M_contig98785.22732.1 vs. uniprot
Match: U1HJ04_ENDPU (Uncharacterized protein n=2 Tax=Endocarpon pusillum TaxID=364733 RepID=U1HJ04_ENDPU)

HSP 1 Score: 67.4 bits (163), Expect = 1.210e-11
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 1
Query:    4 RYACERPGCNRRFAHPSSRKDHMASHTGERPHKCDVPGCGKAFTAKANLTRHKRDVH 174
            RY C    CN+ F+ PSS K H  SHTGE+P KC VPGCGK F+ ++N+ RH++  H
Sbjct:  245 RYICGT--CNKAFSRPSSLKIHTYSHTGEKPWKCQVPGCGKTFSVRSNMKRHEKGCH 299          
BLAST of mRNA_M-pyrifera_M_contig98785.22732.1 vs. uniprot
Match: A0A1Y1WA80_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WA80_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 1.310e-11
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 1
Query:    7 YACERPGCNRRFAHPSSRKDHMASHTGERPHKCDVPGCGKAFTAKANLTRH 159
            Y CE   C + F  PSS + HM +HTGE+PH C  PGCGK+F+ ++NL RH
Sbjct:    1 YPCEI--CKKTFTRPSSLRTHMFTHTGEKPHDCVFPGCGKSFSVRSNLRRH 49          
BLAST of mRNA_M-pyrifera_M_contig98785.22732.1 vs. uniprot
Match: A0A8H7VVE0_9FUNG (Uncharacterized protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7VVE0_9FUNG)

HSP 1 Score: 65.1 bits (157), Expect = 1.810e-11
Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 1
Query:    1 KRYACERPGCNRRFAHPSSRKDHMASHTGERPHKCDVPGCGKAFTAKANLTRHKRDVHK 177
            KRY C++  C + F  PS+ K H+ +HTGERPH CD+PGCG  F   +NL RH R VH+
Sbjct:   28 KRYDCKQ--CPKNFTRPSALKTHVYTHTGERPHGCDIPGCGSRFAVISNLRRHLR-VHR 83          
BLAST of mRNA_M-pyrifera_M_contig98785.22732.1 vs. uniprot
Match: I1CMW2_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CMW2_RHIO9)

HSP 1 Score: 65.1 bits (157), Expect = 1.940e-11
Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 1
Query:    1 KRYACERPGCNRRFAHPSSRKDHMASHTGERPHKCDVPGCGKAFTAKANLTRHKRDVH 174
            K Y C  P C + F  PS+ + H+ +HTGERPH CD+PGCG+ FT  +NL RH R VH
Sbjct:   24 KLYVC--PQCTKPFTRPSALQTHIYTHTGERPHACDMPGCGRRFTVISNLRRHLR-VH 78          
BLAST of mRNA_M-pyrifera_M_contig98785.22732.1 vs. uniprot
Match: A0A1B8F2H9_9PEZI (Uncharacterized protein n=9 Tax=Pseudogymnoascus TaxID=78156 RepID=A0A1B8F2H9_9PEZI)

HSP 1 Score: 67.0 bits (162), Expect = 1.990e-11
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 1
Query:    4 RYACERPGCNRRFAHPSSRKDHMASHTGERPHKCDVPGCGKAFTAKANLTRHKRDVH 174
            RY C  P CN+ F+ PSS K H  SHTGE+P +C V GCGK F+ ++N+ RH+R  H
Sbjct:  272 RYIC--PTCNKAFSRPSSLKIHSHSHTGEKPFRCPVRGCGKKFSVRSNMKRHERGCH 326          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98785.22732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A6JAV0_9PLEO4.900e-1354.39Uncharacterized protein n=1 Tax=Westerdykella orna... [more]
A0A7C8ICV6_9PLEO1.510e-1251.67Uncharacterized protein n=1 Tax=Massariosphaeria p... [more]
A0A090CFA3_PODAN2.500e-1254.39Uncharacterized protein n=2 Tax=Podospora TaxID=51... [more]
A0A4P9XIJ2_9FUNG6.940e-1256.52Uncharacterized protein (Fragment) n=1 Tax=Thamnoc... [more]
A0A1M8A1G4_MALS41.120e-1150.91Similar to S.cerevisiae protein CMR3 (Putative zin... [more]
U1HJ04_ENDPU1.210e-1152.63Uncharacterized protein n=2 Tax=Endocarpon pusillu... [more]
A0A1Y1WA80_9FUNG1.310e-1152.94Uncharacterized protein (Fragment) n=1 Tax=Linderi... [more]
A0A8H7VVE0_9FUNG1.810e-1152.54Uncharacterized protein n=1 Tax=Thamnidium elegans... [more]
I1CMW2_RHIO91.940e-1153.45Uncharacterized protein n=1 Tax=Rhizopus delemar (... [more]
A0A1B8F2H9_9PEZI1.990e-1152.63Uncharacterized protein n=9 Tax=Pseudogymnoascus T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98785contigM-pyrifera_M_contig98785:2..202 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score70.9
Seed ortholog evalue2.6e-10
Seed eggNOG ortholog209285.XP_006691937.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Zinc finger, C2H2 type
EggNOG OGs2122D@147550,3A8AT@33154,3HAP3@35718,3P6RV@4751,3QJJR@4890,3UBBM@5139,KOG1721@1,KOG1721@2759
COG Functional cat.S
Best tax levelChaetomiaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size201
Cds size201
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816904.7578897-CDS-M-pyrifera_M_contig98785:1..2021622816904.7578897-CDS-M-pyrifera_M_contig98785:1..202Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98785 2..202 +
1692278247.048007-CDS-M-pyrifera_M_contig98785:1..2021692278247.048007-CDS-M-pyrifera_M_contig98785:1..202Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98785 2..202 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98785.22732.1prot_M-pyrifera_M_contig98785.22732.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig98785 2..202 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig98785.22732.1

>prot_M-pyrifera_M_contig98785.22732.1 ID=prot_M-pyrifera_M_contig98785.22732.1|Name=mRNA_M-pyrifera_M_contig98785.22732.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp
KRYACERPGCNRRFAHPSSRKDHMASHTGERPHKCDVPGCGKAFTAKANL
TRHKRDVHKIAPRRKTN
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mRNA from alignment at M-pyrifera_M_contig98785:2..202+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig98785.22732.1 ID=mRNA_M-pyrifera_M_contig98785.22732.1|Name=mRNA_M-pyrifera_M_contig98785.22732.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=201bp|location=Sequence derived from alignment at M-pyrifera_M_contig98785:2..202+ (Macrocystis pyrifera P11B4 male)
AAACGGTACGCATGTGAGCGGCCGGGATGTAACCGACGATTCGCCCACCC GTCCTCCAGAAAAGACCACATGGCGTCCCACACGGGAGAGAGGCCGCACA AGTGTGACGTCCCGGGCTGCGGCAAGGCGTTCACGGCCAAGGCGAACCTC ACCAGACACAAGAGAGACGTCCACAAAATTGCTCCACGGAGGAAAACGAA C
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig98785:2..202+

>mRNA_M-pyrifera_M_contig98785.22732.1 ID=mRNA_M-pyrifera_M_contig98785.22732.1|Name=mRNA_M-pyrifera_M_contig98785.22732.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=402bp|location=Sequence derived from alignment at M-pyrifera_M_contig98785:2..202+ (Macrocystis pyrifera P11B4 male)
AAACGGTACGCATGTGAGCGGCCGGGATGTAACCGACGATTCGCCCACCC
GTCCTCCAGAAAAGACCACATGGCGTCCCACACGGGAGAGAGGCCGCACA
AGTGTGACGTCCCGGGCTGCGGCAAGGCGTTCACGGCCAAGGCGAACCTC
ACCAGACACAAGAGAGACGTCCACAAAATTGCTCCACGGAGGAAAACGAA
CAAACGGTACGCATGTGAGCGGCCGGGATGTAACCGACGATTCGCCCACC
CGTCCTCCAGAAAAGACCACATGGCGTCCCACACGGGAGAGAGGCCGCAC
AAGTGTGACGTCCCGGGCTGCGGCAAGGCGTTCACGGCCAAGGCGAACCT
CACCAGACACAAGAGAGACGTCCACAAAATTGCTCCACGGAGGAAAACGA
AC
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