mRNA_M-pyrifera_M_contig98701.22720.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig98701.22720.1
Unique NamemRNA_M-pyrifera_M_contig98701.22720.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig98701.22720.1 vs. uniprot
Match: A0A7V8VAB4_9BACT (Cytochrome c domain-containing protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8VAB4_9BACT)

HSP 1 Score: 474 bits (1221), Expect = 4.400e-159
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
Query:    1 PGPVVSPKSLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRSIVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQMHRLIVLSATYRQSSHDITRYDQVDKNNRYFWRAQRRHLDSEELRDTVLSVAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLVRSQTDPFMTVFNCADPSMQVAQRNNSITPL 690
            PGPVVSPKSLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRSIVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQMHRLIVLSATYRQSSHDITRYDQVDKNNRYFWRAQRRHLDSEELRDTVLSVAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLVRSQTDPFMTVFNCADPSMQVAQRNNSITPL
Sbjct:  683 PGPVVSPKSLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRSIVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQMHRLIVLSATYRQSSHDITRYDQVDKNNRYFWRAQRRHLDSEELRDTVLSVAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLVRSQTDPFMTVFNCADPSMQVAQRNNSITPL 912          
BLAST of mRNA_M-pyrifera_M_contig98701.22720.1 vs. uniprot
Match: A0A3E0N209_9BACT (DUF1553 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0N209_9BACT)

HSP 1 Score: 318 bits (815), Expect = 3.070e-100
Identity = 151/234 (64.53%), Postives = 187/234 (79.91%), Query Frame = 1
Query:    1 PGPVVSPKSLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRSIVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQMHRLIVLSATYRQSSHDITRYDQ----VDKNNRYFWRAQRRHLDSEELRDTVLSVAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLVRSQTDPFMTVFNCADPSMQVAQRNNSITPL 690
            PG  V P++LDC+EGLS  L++ +++ EGQRR ALA WL+   N LTWRSIVNR+WQYH G+ IV TPNDFGRMG  P+HPELL++LA+EFRDG QSLK +HRLI  SATYRQ+S      +     +D +NR  WR  RR L++E +RD++L V+GKLDLKM GPSFQ+FVI+KP+HSPHY+Y LHDP+DPKSHRRSIYRF+VRSQT PFMTV +CADPSM VA+RN +I+PL
Sbjct:  527 PGEKVGPRALDCLEGLSGALDVPEEAPEGQRRVALAHWLSSRENSLTWRSIVNRVWQYHFGRGIVDTPNDFGRMGGTPSHPELLDYLAVEFRDGRQSLKDLHRLICNSATYRQASRTPAALEAKAHAIDADNRLLWRVNRRQLEAEAVRDSILFVSGKLDLKMGGPSFQDFVIDKPEHSPHYEYRLHDPEDPKSHRRSIYRFVVRSQTQPFMTVLDCADPSMMVAKRNTTISPL 760          
BLAST of mRNA_M-pyrifera_M_contig98701.22720.1 vs. uniprot
Match: A0A7C4UHA9_9BACT (DUF1553 domain-containing protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4UHA9_9BACT)

HSP 1 Score: 317 bits (813), Expect = 2.100e-99
Identity = 152/233 (65.24%), Postives = 187/233 (80.26%), Query Frame = 1
Query:    1 PGPVVSPKSLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRSIVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQMHRLIVLSATYRQSSHDITRYDQ---VDKNNRYFWRAQRRHLDSEELRDTVLSVAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLVRSQTDPFMTVFNCADPSMQVAQRNNSITPL 690
            PGP V+P +L C+ GL ++  L    +EG+RRAALARWLTD+RNPL WRSIVNR+W+YH G+ IV TPNDFGRMGQLPTHPELL+WLA EFRD G S+KQ+HRLIV S TYRQSS      DQ   +D +N  +WR  RR L++E +RD+VL+V+GKLD +M GP+FQ+FVIEKP+HSPHYQYHLHDP+D ++HRRS+YRFLVRSQ  PFMT  +CADPSMQV +RN +I+ L
Sbjct:  592 PGPEVAPGALTCVAGLPSKFALPAGHAEGERRAALARWLTDARNPLLWRSIVNRVWRYHFGRGIVETPNDFGRMGQLPTHPELLDWLASEFRDRGGSIKQLHRLIVTSNTYRQSSTLPDGNDQPQSIDADNSLYWRMNRRRLEAEAVRDSVLAVSGKLDRRMGGPAFQDFVIEKPEHSPHYQYHLHDPEDRRTHRRSVYRFLVRSQQQPFMTTLDCADPSMQVDRRNETISSL 824          
BLAST of mRNA_M-pyrifera_M_contig98701.22720.1 vs. uniprot
Match: A0A2D9N0M8_9BACT (PSD1 domain-containing protein (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D9N0M8_9BACT)

HSP 1 Score: 297 bits (760), Expect = 5.120e-98
Identity = 139/226 (61.50%), Postives = 171/226 (75.66%), Query Frame = 1
Query:   13 VSPKSLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRSIVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQMHRLIVLSATYRQSSHDITRYDQVDKNNRYFWRAQRRHLDSEELRDTVLSVAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLVRSQTDPFMTVFNCADPSMQVAQRNNSITPL 690
            V P +L   +      +L  D +E  RR ALARWLT + NPLTWRSIVNR+WQYH G  IVATPNDFG MG  PTHP+LL+WLA EFRD GQSLKQ+HRLI+ SATYRQSS  I  Y+ +D  NR+ WR  RR L++E LRD+VL ++GK+  +M+GP F++FV+E PQHSPHY+Y+ HDP+D + HRRS+YRFLVRSQ  PFMT  NCADPS QVA+R+ +IT L
Sbjct:   14 VGPGTLRLAKRDDGTFDLSGDHAESDRRVALARWLTKTDNPLTWRSIVNRVWQYHFGTGIVATPNDFGEMGARPTHPQLLDWLAAEFRDNGQSLKQLHRLILTSATYRQSSATIEAYENIDSQNRFLWRMNRRQLEAEALRDSVLVLSGKMKFQMYGPGFRDFVLEHPQHSPHYEYYKHDPEDVRIHRRSVYRFLVRSQQQPFMTTLNCADPSQQVARRDEAITAL 239          
BLAST of mRNA_M-pyrifera_M_contig98701.22720.1 vs. uniprot
Match: A0A2G4I8U0_9BACT (F5/8 type C domain-containing protein n=2 Tax=Pedosphaera sp. TaxID=2024890 RepID=A0A2G4I8U0_9BACT)

HSP 1 Score: 310 bits (794), Expect = 1.670e-96
Identity = 144/226 (63.72%), Postives = 180/226 (79.65%), Query Frame = 1
Query:   13 VSPKSLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRSIVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQMHRLIVLSATYRQSSHDITRYDQVDKNNRYFWRAQRRHLDSEELRDTVLSVAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLVRSQTDPFMTVFNCADPSMQVAQRNNSITPL 690
            V P +   + GL  E  L  + +EG+RRAALA+WL+   NPLTWRS+VNR+WQYH G+ +V TPNDFGRMG LPTHPELL+WLA+EFRDGG S+K++H+LIV+SATYRQSS   +++  +D  NR+     RR LD+E +RD  L VAGKLD KM GP+FQ+F++EKP+HSPHYQYHLHDP+DPKSHRRS+YRFLVRSQT PFMT  +CADPSMQV +RN S++ L
Sbjct:  614 VVPAAPSYLAGLPGEFALPAEHTEGERRAALAKWLSSPDNPLTWRSMVNRVWQYHFGRGLVETPNDFGRMGALPTHPELLDWLAVEFRDGGGSVKRLHKLIVMSATYRQSSSATSQHTALDAENRFLSHQNRRKLDAEAVRDATLFVAGKLDPKMGGPAFQDFIVEKPEHSPHYQYHLHDPEDPKSHRRSVYRFLVRSQTQPFMTTLDCADPSMQVGKRNESVSAL 839          
BLAST of mRNA_M-pyrifera_M_contig98701.22720.1 vs. uniprot
Match: A0A517Z5W9_9PLAN (Planctomycete cytochrome C n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z5W9_9PLAN)

HSP 1 Score: 311 bits (798), Expect = 2.520e-96
Identity = 146/234 (62.39%), Postives = 180/234 (76.92%), Query Frame = 1
Query:    1 PGPVVSPKSLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRSIVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQMHRLIVLSATYRQSS-----HDITRYDQVDKNNRYFWRAQRRHLDSEELRDTVLSVAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLVRSQTDPFMTVFNCADPSMQVAQRNNSITP 687
            PG +  P ++  I G SA  +L     EG RRAALARW+TD  NPLTWRSIVNR+W YH G+ +V TPNDFGRMGQ PTHPELL+WLA E R GG+S+K +HRLIV SATYRQ+S     +D+   +++D +N+Y WR   R L++E +RD VL V+G LDLKM+GP FQ+FVIEKPQHSPHY+YHLHDP DP+SHRR++YRFLVRSQ  PFMT  +CADPSMQV +RN ++TP
Sbjct:  713 PGEIAQPGTVAAIAGESAHFDLPPGHREGDRRAALARWITDRNNPLTWRSIVNRVWLYHFGRGLVDTPNDFGRMGQEPTHPELLDWLACELRGGGESIKHLHRLIVCSATYRQASRPEAGNDVAANERIDGDNQYLWRMNPRRLEAEAIRDAVLQVSGCLDLKMYGPGFQDFVIEKPQHSPHYEYHLHDPYDPRSHRRAVYRFLVRSQQQPFMTTLDCADPSMQVEKRNETLTP 946          
BLAST of mRNA_M-pyrifera_M_contig98701.22720.1 vs. uniprot
Match: A0A3N5R9C6_9PLAN (DUF1553 domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3N5R9C6_9PLAN)

HSP 1 Score: 291 bits (746), Expect = 4.040e-96
Identity = 134/222 (60.36%), Postives = 174/222 (78.38%), Query Frame = 1
Query:   25 SLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRSIVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQMHRLIVLSATYRQSSHDITRYDQVDKNNRYFWRAQRRHLDSEELRDTVLSVAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLVRSQTDPFMTVFNCADPSMQVAQRNNSITPL 690
            +L  I+ L +  ++ + +SE +RRAALA WL+D +NPLTWRSIVNR+W YH G+ +V TPNDFGR G+ PTHPELL+WLA+EFRDGGQSLK++HRLI  S  YRQS+ +  R  ++D  N       RR L++E +RD+VL+V+G+LDL M+GPSFQ+FVIEKP+HSPHY+Y L DP+DP+ HRRSIYRF+VRSQ  PFMT  +CADPSMQV +RN S++ L
Sbjct:    2 ALSAIKSLPSRFDVPEGASESERRAALAHWLSDVKNPLTWRSIVNRVWHYHFGKGLVETPNDFGRNGRRPTHPELLDWLAVEFRDGGQSLKELHRLITCSGAYRQSTRESARASEIDAENLLLSHMHRRRLEAEAIRDSVLAVSGRLDLTMYGPSFQDFVIEKPEHSPHYEYELADPNDPRIHRRSIYRFIVRSQQQPFMTTLDCADPSMQVDRRNESLSAL 223          
BLAST of mRNA_M-pyrifera_M_contig98701.22720.1 vs. uniprot
Match: A0A517YGN4_9BACT (Planctomycete cytochrome C n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517YGN4_9BACT)

HSP 1 Score: 310 bits (794), Expect = 6.670e-96
Identity = 151/234 (64.53%), Postives = 181/234 (77.35%), Query Frame = 1
Query:   13 VSPKSLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRSIVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQMHRLIVLSATYRQSSHD----ITRYD----QVDKNNRYFWRAQRRHLDSEELRDTVLSVAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLVRSQTDPFMTVFNCADPSMQVAQRNNSITPL 690
            V P +L  +   S +  L +  SEG+RRAALARWL+D RNPLTWRS+VNR+WQYH+ +AIV TPNDFGRMGQLP+HPELL+WLA+EF DGGQSLK +HRLIV S+TYRQ S      +T+      + D  N Y WR  RR L++E LRD VL V+GKLD KM GPSFQ+FVI++P HSPHY+YHLHDP DPKSHRRSIYRF+VRSQ  PFMT  +CADPSM+V +RN SI+PL
Sbjct:  690 VQPGALQSLPEWSGDFRLPEGHSEGERRAALARWLSDRRNPLTWRSVVNRVWQYHLSRAIVDTPNDFGRMGQLPSHPELLDWLAVEFLDGGQSLKSLHRLIVTSSTYRQQSQPDENVLTKLKNDPRKTDAGNVYLWRMNRRKLEAEALRDAVLQVSGKLDPKMGGPSFQDFVIDQPAHSPHYEYHLHDPSDPKSHRRSIYRFIVRSQPQPFMTTLDCADPSMRVDKRNESISPL 923          
BLAST of mRNA_M-pyrifera_M_contig98701.22720.1 vs. uniprot
Match: UPI0019BF606A (DUF1553 domain-containing protein n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI0019BF606A)

HSP 1 Score: 293 bits (750), Expect = 1.110e-95
Identity = 145/255 (56.86%), Postives = 178/255 (69.80%), Query Frame = 1
Query:    4 GPVVSPKSLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRSIVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQMHRLIVLSATYRQSSHD--------------------------ITRYDQVDKNNRYFWRAQRRHLDSEELRDTVLSVAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLVRSQTDPFMTVFNCADPSMQVAQRNNSITPL 690
            G  V P  +    G + E  L  +  EG RR ALA+W+ D ++PLTWRSI NR+WQ+H G+ IV +PNDFGRMGQLP+HPELL+WLA+EFRDGG+SLKQ+HRLIV SATYRQ S                            +     +D  N   WRA RR LD+E LRD++L VAGKLD +M GP+FQ+FVIEKP+HSPHY+YHLHDP+DP+SHRRSIYRFLVRSQT PFMT  +CADPSM V +R+ ++TPL
Sbjct:   44 GDEVGPGIVPLRPGETGEFTLAPNHIEGDRRVALAKWIVDEQHPLTWRSIANRVWQHHFGRGIVDSPNDFGRMGQLPSHPELLDWLAVEFRDGGRSLKQLHRLIVTSATYRQVSQSSEGGGGRGDVKTNTSSSVASSLPPSALRTPHSIDSGNVLLWRANRRKLDAEALRDSILFVAGKLDDRMGGPAFQDFVIEKPEHSPHYEYHLHDPEDPRSHRRSIYRFLVRSQTQPFMTTLDCADPSMIVDKRSETVTPL 298          
BLAST of mRNA_M-pyrifera_M_contig98701.22720.1 vs. uniprot
Match: A0A3B8Q775_9BACT (F5/8 type C domain-containing protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3B8Q775_9BACT)

HSP 1 Score: 307 bits (787), Expect = 1.480e-95
Identity = 146/230 (63.48%), Postives = 181/230 (78.70%), Query Frame = 1
Query:    1 PGPVVSPKSLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRSIVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQMHRLIVLSATYRQSSHDITRYDQVDKNNRYFWRAQRRHLDSEELRDTVLSVAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLVRSQTDPFMTVFNCADPSMQVAQRNNSITPL 690
            PG  V P +++ I G++ E  L  D+ EG+RR ALA WLTD RNPLTWRSIVNR+WQYH G+ +V +PNDFGRMG+ PTHPELL+WLA+EFRDGGQSLK +HRL+V S TYRQS       ++VD +N++ WR  RR L++E +RDT+LSVAGKLD  M GPSFQ+FV+E+P+HSPHY+YHLHDP+DPKS RRSIYRFLVRSQ  PFM   +CADPSM V +RN ++  L
Sbjct:  601 PGREVGPGTVEFISGVN-EFPLPADAPEGERRVALANWLTDPRNPLTWRSIVNRVWQYHFGRGLVDSPNDFGRMGRNPTHPELLDWLAVEFRDGGQSLKSLHRLLVTSRTYRQSVASSLANERVDADNQFLWRMNRRKLEAEAVRDTMLSVAGKLDPAMGGPSFQDFVVERPEHSPHYEYHLHDPEDPKSQRRSIYRFLVRSQPQPFMATLDCADPSMSVDRRNETMNAL 829          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98701.22720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V8VAB4_9BACT4.400e-159100.00Cytochrome c domain-containing protein n=1 Tax=Bre... [more]
A0A3E0N209_9BACT3.070e-10064.53DUF1553 domain-containing protein n=1 Tax=Planctom... [more]
A0A7C4UHA9_9BACT2.100e-9965.24DUF1553 domain-containing protein n=1 Tax=Gemmatac... [more]
A0A2D9N0M8_9BACT5.120e-9861.50PSD1 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A2G4I8U0_9BACT1.670e-9663.72F5/8 type C domain-containing protein n=2 Tax=Pedo... [more]
A0A517Z5W9_9PLAN2.520e-9662.39Planctomycete cytochrome C n=1 Tax=Maioricimonas r... [more]
A0A3N5R9C6_9PLAN4.040e-9660.36DUF1553 domain-containing protein (Fragment) n=1 T... [more]
A0A517YGN4_9BACT6.670e-9664.53Planctomycete cytochrome C n=1 Tax=Anatilimnocola ... [more]
UPI0019BF606A1.110e-9556.86DUF1553 domain-containing protein n=1 Tax=Candidat... [more]
A0A3B8Q775_9BACT1.480e-9563.48F5/8 type C domain-containing protein n=1 Tax=Verr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98701contigM-pyrifera_M_contig98701:1..690 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score300.1
Seed ortholog evalue9.1e-79
Seed eggNOG ortholog1123242.JH636435_gene937
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Planctomycete cytochrome C
EggNOG OGs2IXZ4@203682,COG2010@1,COG2010@2
COG Functional cat.C
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size690
Cds size690
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816904.292709-CDS-M-pyrifera_M_contig98701:0..6901622816904.292709-CDS-M-pyrifera_M_contig98701:0..690Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98701 1..690 -
1692278246.8476262-CDS-M-pyrifera_M_contig98701:0..6901692278246.8476262-CDS-M-pyrifera_M_contig98701:0..690Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98701 1..690 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98701.22720.1prot_M-pyrifera_M_contig98701.22720.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig98701 1..690 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig98701.22720.1

>prot_M-pyrifera_M_contig98701.22720.1 ID=prot_M-pyrifera_M_contig98701.22720.1|Name=mRNA_M-pyrifera_M_contig98701.22720.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp
PGPVVSPKSLDCIEGLSAELNLEDDSSEGQRRAALARWLTDSRNPLTWRS
IVNRIWQYHMGQAIVATPNDFGRMGQLPTHPELLEWLAMEFRDGGQSLKQ
MHRLIVLSATYRQSSHDITRYDQVDKNNRYFWRAQRRHLDSEELRDTVLS
VAGKLDLKMWGPSFQNFVIEKPQHSPHYQYHLHDPDDPKSHRRSIYRFLV
RSQTDPFMTVFNCADPSMQVAQRNNSITPL
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mRNA from alignment at M-pyrifera_M_contig98701:1..690-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig98701.22720.1 ID=mRNA_M-pyrifera_M_contig98701.22720.1|Name=mRNA_M-pyrifera_M_contig98701.22720.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=690bp|location=Sequence derived from alignment at M-pyrifera_M_contig98701:1..690- (Macrocystis pyrifera P11B4 male)
CCAGGGCCGGTCGTATCTCCAAAATCGCTGGACTGTATCGAAGGGCTTTC CGCAGAACTCAACCTGGAGGATGATTCCTCCGAGGGACAGCGCCGCGCCG CATTGGCTCGTTGGCTAACCGACTCTCGAAATCCACTTACCTGGCGCTCG ATTGTCAATCGCATTTGGCAGTATCACATGGGCCAGGCAATCGTCGCCAC CCCCAACGACTTTGGACGAATGGGACAACTGCCCACGCATCCCGAACTGC TGGAATGGTTGGCGATGGAGTTTCGCGACGGCGGACAGTCGCTCAAGCAG ATGCACCGCCTGATCGTGCTGAGTGCCACCTATCGTCAGTCATCCCACGA CATCACACGATACGATCAAGTTGACAAAAACAATCGCTACTTCTGGCGGG CTCAGCGCCGTCACCTCGATTCGGAAGAGCTTCGCGACACGGTTCTCTCG GTAGCAGGCAAGCTCGATCTTAAAATGTGGGGGCCAAGCTTCCAGAATTT CGTCATCGAGAAACCGCAACACTCGCCTCACTACCAATATCACTTACACG ACCCCGACGATCCTAAATCACATCGTCGCAGCATCTACCGGTTCCTGGTT CGGTCTCAAACCGACCCGTTCATGACCGTTTTCAACTGTGCCGATCCATC AATGCAAGTCGCGCAGCGAAACAATTCAATCACTCCGCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig98701:1..690-

>mRNA_M-pyrifera_M_contig98701.22720.1 ID=mRNA_M-pyrifera_M_contig98701.22720.1|Name=mRNA_M-pyrifera_M_contig98701.22720.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1380bp|location=Sequence derived from alignment at M-pyrifera_M_contig98701:1..690- (Macrocystis pyrifera P11B4 male)
CCAGGGCCGGTCGTATCTCCAAAATCGCTGGACTGTATCGAAGGGCTTTC
CGCAGAACTCAACCTGGAGGATGATTCCTCCGAGGGACAGCGCCGCGCCG
CATTGGCTCGTTGGCTAACCGACTCTCGAAATCCACTTACCTGGCGCTCG
ATTGTCAATCGCATTTGGCAGTATCACATGGGCCAGGCAATCGTCGCCAC
CCCCAACGACTTTGGACGAATGGGACAACTGCCCACGCATCCCGAACTGC
TGGAATGGTTGGCGATGGAGTTTCGCGACGGCGGACAGTCGCTCAAGCAG
ATGCACCGCCTGATCGTGCTGAGTGCCACCTATCGTCAGTCATCCCACGA
CATCACACGATACGATCAAGTTGACAAAAACAATCGCTACTTCTGGCGGG
CTCAGCGCCGTCACCTCGATTCGGAAGAGCTTCGCGACACGGTTCTCTCG
GTAGCAGGCAAGCTCGATCTTAAAATGTGGGGGCCAAGCTTCCAGAATTT
CGTCATCGAGAAACCGCAACACTCGCCTCACTACCAATATCACTTACACG
ACCCCGACGATCCTAAATCACATCGTCGCAGCATCTACCGGTTCCTGGTT
CGGTCTCAAACCGACCCGTTCATGACCGTTTTCAACTGTGCCGATCCATC
AATGCAAGTCGCGCAGCGAAACAATTCAATCACTCCGCTGCCAGGGCCGG
TCGTATCTCCAAAATCGCTGGACTGTATCGAAGGGCTTTCCGCAGAACTC
AACCTGGAGGATGATTCCTCCGAGGGACAGCGCCGCGCCGCATTGGCTCG
TTGGCTAACCGACTCTCGAAATCCACTTACCTGGCGCTCGATTGTCAATC
GCATTTGGCAGTATCACATGGGCCAGGCAATCGTCGCCACCCCCAACGAC
TTTGGACGAATGGGACAACTGCCCACGCATCCCGAACTGCTGGAATGGTT
GGCGATGGAGTTTCGCGACGGCGGACAGTCGCTCAAGCAGATGCACCGCC
TGATCGTGCTGAGTGCCACCTATCGTCAGTCATCCCACGACATCACACGA
TACGATCAAGTTGACAAAAACAATCGCTACTTCTGGCGGGCTCAGCGCCG
TCACCTCGATTCGGAAGAGCTTCGCGACACGGTTCTCTCGGTAGCAGGCA
AGCTCGATCTTAAAATGTGGGGGCCAAGCTTCCAGAATTTCGTCATCGAG
AAACCGCAACACTCGCCTCACTACCAATATCACTTACACGACCCCGACGA
TCCTAAATCACATCGTCGCAGCATCTACCGGTTCCTGGTTCGGTCTCAAA
CCGACCCGTTCATGACCGTTTTCAACTGTGCCGATCCATCAATGCAAGTC
GCGCAGCGAAACAATTCAATCACTCCGCTG
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