mRNA_M-pyrifera_M_contig98495.22678.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig98495.22678.1 vs. uniprot
Match: A0A6P7G212_DIAVI (lysosome membrane protein 2 isoform X1 n=3 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7G212_DIAVI) HSP 1 Score: 60.8 bits (146), Expect = 7.120e-8 Identity = 43/147 (29.25%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 58 WASSSKDPVHYEIYGWNVSNAAEVMRSGAKPVLNETKFAQYTLKQDRINVSYSDGGKMVEFLE--WDHVGNCEQGPCHEKLVVPNLVMLALK------AKYGALIDDIVYDVVYGKDDFHKLWQERSVEELAFGYVDPVLEDFKTIL 474 WA +P +Y +NV+NA E + +G+KP++NE Y + +R N+S D G + L+ + +G + +VVPN+ ML+ A++ L + D++ K + E SVE+L +GY DP+L+ K ++ Sbjct: 64 WAKPPVEP-KIRLYIYNVTNADEFLNNGSKPIVNELGPYVYRERWERKNISIHDNGTLTFNLQKIYHFDPEASKGSPDDLVVVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKP-----FVEVSVEQLLWGYEDPLLKLAKDVV 204
BLAST of mRNA_M-pyrifera_M_contig98495.22678.1 vs. uniprot
Match: A0A834J2U4_VESVU (Uncharacterized protein n=8 Tax=Vespinae TaxID=7439 RepID=A0A834J2U4_VESVU) HSP 1 Score: 57.4 bits (137), Expect = 1.130e-6 Identity = 43/150 (28.67%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 49 YGVWASSSKDPVHYEIYGWNVSNAAEVMRSGAKPVLNETKFAQYTLKQDRINVSYSDGGKMVEFLEWDHVGNCE--QGPCHEKLVVPNLVMLAL--KAKYGA----LIDDIVYDVVYGKDDFHKLWQERSVEELAFGYVDPVLEDFKTIL 474 YG W + P +Y +NV+NA E + +G KPVL+E Y+ +++ + +++ + + +V E G + +VVPN+ ML+ ++KY A L + D++ K + E SVE+L +GY DP+L+ K ++ Sbjct: 61 YGWWKAPPVIP-RLHVYIYNVTNADEFLNNGEKPVLDELGPYVYSQHWEKVEIKFNENDTVSYKIRKQYVFTPELSSGSDDDLVVVPNVPMLSATSQSKYAARFLRLAMASIMDILKIKP-----FVEVSVEQLLWGYEDPLLKLAKDVV 204
BLAST of mRNA_M-pyrifera_M_contig98495.22678.1 vs. uniprot
Match: UPI001CFA2DBE (lysosome membrane protein 2-like n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA2DBE) HSP 1 Score: 56.2 bits (134), Expect = 2.790e-6 Identity = 36/139 (25.90%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 82 VHYEIYGWNVSNAAEVMRSGAKPVLNETKFAQYTLKQDRINVSYSDGG-------KMVEFLEWDHVGNCEQGPCHEKLVVPNLVMLAL--KAKYGALIDDIVYDVVYGKDDFHKLWQERSVEELAFGYVDPVLEDFKTI 471 ++ + + +N++N EV+ G KP++ E Y + ++++ + + K F + VGN P E + V NL M+ + AK G +I++ + ++ H L+Q +V+EL +GY DP+L++F + Sbjct: 162 IYTDFFIFNITNPREVLE-GKKPIVKELGPYVYREYRSKVDIVFYENNTVSAISPKSFVFEKDTSVGN----PKEETVTVINLPMITMLTMAKQGGIIEEFILSLLSNMQHIH-LFQTHTVDELLWGYEDPLLKEFNKL 294
BLAST of mRNA_M-pyrifera_M_contig98495.22678.1 vs. uniprot
Match: UPI001CAA0F65 (scavenger receptor class B member 1 n=3 Tax=Polistes TaxID=7456 RepID=UPI001CAA0F65) HSP 1 Score: 55.8 bits (133), Expect = 3.860e-6 Identity = 43/150 (28.67%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 49 YGVWASSSKDPVHYEIYGWNVSNAAEVMRSGAKPVLNETKFAQYTLKQDRINVSYSDGGKMVEFLEWDHVGNCEQ--GPCHEKLVVPNLVMLAL--KAKYGA----LIDDIVYDVVYGKDDFHKLWQERSVEELAFGYVDPVLEDFKTIL 474 +G W + P+ + IY +NV+NA E + +G KP+LNE Y + ++ +++++ + + +V E G + +VVPN+ ML+ ++KY A L + D++ K + E SVE+L +GY DP+L+ K ++ Sbjct: 61 FGWWKAPPVTPLLH-IYIYNVTNADEFLNNGDKPILNELGPYVYKQRWEKADITFNGNDTISYKIRKTYVFTPELSVGSDDDLVVVPNVPMLSATSQSKYAARFLRLAMASIMDILKIKP-----FVEVSVEQLLWGYEDPLLKLAKDVV 204
BLAST of mRNA_M-pyrifera_M_contig98495.22678.1 vs. uniprot
Match: A0A0J7L9G5_LASNI (Scavenger receptor class b member 1 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7L9G5_LASNI) HSP 1 Score: 53.9 bits (128), Expect = 1.770e-5 Identity = 41/150 (27.33%), Postives = 72/150 (48.00%), Query Frame = 1 Query: 49 YGVWASSSKDPVHYEIYGWNVSNAAEVMRSGAKPVLNETKFAQYTLKQDRINVSYSDGGKMVEFLEWDHVGN--CEQGPCHEKLVVPNLVMLALK------AKYGALIDDIVYDVVYGKDDFHKLWQERSVEELAFGYVDPVLEDFKTIL 474 Y W P +IY +NV+NA E + +G KP L E Y +++++ ++D G + ++ N G + +VVPN+ ML+ A++ L + D++ K + E SVE+L +GY DP+L+ K ++ Sbjct: 51 YKFWKEPPVVP-RLQIYIYNVTNADEFLNNGEKPALQELGPYVYLQHWEKVDIKFNDNGTVSYKVKKTFTFNESLSAGSQDDLVVVPNVPMLSATSQSKHAARFLRLAMASIMDILKIKP-----FVEVSVEQLLWGYEDPLLKLAKDVV 194
BLAST of mRNA_M-pyrifera_M_contig98495.22678.1 vs. uniprot
Match: C5LMP4_PERM5 (Uncharacterized protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LMP4_PERM5) HSP 1 Score: 53.5 bits (127), Expect = 2.620e-5 Identity = 34/115 (29.57%), Postives = 53/115 (46.09%), Query Frame = 1 Query: 58 WASSSKDP----------VHYEIYGWNVSNAAEVMRSGAKPVLNETKFAQYTLKQDRINVSYSDGGKMVEFL-EWDHVGNC------EQGPCHEKLVVPNLVMLALKAKYGALID 351 W +SKD + Y+ Y +NV+N AEV++ GAKP++ E + Q+RI S G E + W+ E EK+VVPNL +L+ + G ++ Sbjct: 115 WCDASKDGCSKPDMCLKGMPYDFYAFNVTNPAEVLKDGAKPIVQELRPIHAAQTQERIEASVDVGKWNKEGIAHWNETNTFVFADKDETNLLQEKVVVPNLALLSTVTEMGQTVN 229
BLAST of mRNA_M-pyrifera_M_contig98495.22678.1 vs. uniprot
Match: C5LZH4_PERM5 (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LZH4_PERM5) HSP 1 Score: 52.8 bits (125), Expect = 3.280e-5 Identity = 33/115 (28.70%), Postives = 51/115 (44.35%), Query Frame = 1 Query: 58 WASSSKDP----------VHYEIYGWNVSNAAEVMRSGAKPVLNETKFAQYTLKQDRINVSYS-DGGKMVEFLEWDHVGNC------EQGPCHEKLVVPNLVMLALKAKYGALID 351 W +SKD + Y+ Y +NV+N AEV++ GAKP++ E + Q+RI S D W+ E EK+VVPNL +L+ + G ++ Sbjct: 115 WCDASKDGCSKPDMCLKGMPYDFYAFNVTNPAEVLKDGAKPIVQELRPIHAAQTQERIEASVDVDKWNKEGIAHWNETNTFVFADKDETNLLQEKVVVPNLALLSTVTEMGQTVN 229
BLAST of mRNA_M-pyrifera_M_contig98495.22678.1 vs. uniprot
Match: UPI00106D343E (lysosome membrane protein 2-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D343E) HSP 1 Score: 52.8 bits (125), Expect = 4.510e-5 Identity = 42/152 (27.63%), Postives = 70/152 (46.05%), Query Frame = 1 Query: 49 YGVWASSSKDPVHYEIYGWNVSNAAEVMRSGAKPVLNETKFAQYTLK--QDRINVSYSDGGKMVEFLE-----WDHVGNCEQGPCH-EKLVVPNLVMLALKAKYGALIDDIVYDVVYG---KDDFHKLWQERSVEELAFGYVDPVLEDFKTI 471 Y WA + PV + Y +NV N EV++ GAKPVL E YTL Q + N+++ D V + E +D +CE + +K+ N+ ++ + D + + G + L+ R V +L +GY DP+L + + Sbjct: 75 YKPWAEPTM-PVPNKYYFFNVVNPDEVVKDGAKPVLEEK--GPYTLLSYQKKFNITWQDKDGTVSYDEKSWFIYDSASSCESCDLYNDKITTVNMPLMVVVEMLKKYPDFFHWKRLVGGILRRYKETLFMTRKVNDLIWGYEDPLLVEINKL 223
BLAST of mRNA_M-pyrifera_M_contig98495.22678.1 vs. uniprot
Match: C5KYW7_PERM5 (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KYW7_PERM5) HSP 1 Score: 52.8 bits (125), Expect = 4.650e-5 Identity = 33/115 (28.70%), Postives = 51/115 (44.35%), Query Frame = 1 Query: 58 WASSSKDP----------VHYEIYGWNVSNAAEVMRSGAKPVLNETKFAQYTLKQDRINVSYS-DGGKMVEFLEWDHVGNC------EQGPCHEKLVVPNLVMLALKAKYGALID 351 W +SKD + Y+ Y +NV+N AEV++ GAKP++ E + Q+RI S D W+ E EK+VVPNL +L+ + G ++ Sbjct: 44 WCDASKDGCSKPDMCLKGMPYDFYAFNVTNPAEVLKDGAKPIVQELRPIHAAQTQERIEASVDVDKWNKEGIAHWNETNTFVFADKDETNLLQEKVVVPNLALLSTVTEMGQTVN 158 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98495.22678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig98495.22678.1 >prot_M-pyrifera_M_contig98495.22678.1 ID=prot_M-pyrifera_M_contig98495.22678.1|Name=mRNA_M-pyrifera_M_contig98495.22678.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp SQLQDAVSIDSKDATGYGVWASSSKDPVHYEIYGWNVSNAAEVMRSGAKPback to top mRNA from alignment at M-pyrifera_M_contig98495:194..667+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig98495.22678.1 ID=mRNA_M-pyrifera_M_contig98495.22678.1|Name=mRNA_M-pyrifera_M_contig98495.22678.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig98495:194..667+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig98495:194..667+ >mRNA_M-pyrifera_M_contig98495.22678.1 ID=mRNA_M-pyrifera_M_contig98495.22678.1|Name=mRNA_M-pyrifera_M_contig98495.22678.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig98495:194..667+ (Macrocystis pyrifera P11B4 male)back to top |