mRNA_M-pyrifera_M_contig98410.22664.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig98410.22664.1
Unique NamemRNA_M-pyrifera_M_contig98410.22664.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig98410.22664.1 vs. uniprot
Match: A0A7X0SSX7_9BACL (3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=Cohnella zeiphila TaxID=2761120 RepID=A0A7X0SSX7_9BACL)

HSP 1 Score: 262 bits (670), Expect = 3.120e-84
Identity = 128/233 (54.94%), Postives = 166/233 (71.24%), Query Frame = 1
Query:    1 AMRACADANIYPSELDRIIVCTVTPDQIVPSTASLVQARIGAMNAGAFDLQAACAGFVYGLSVAASMIATGMHRRVLLIGADTLTRYVDYTDRKTCILFGDGAGAVIMAATDENRGVMHYSLHADGTHSQVIGIPAGGTRTPSNHDTVALRQHFIQVEGRRVFKFATNAFVDLTRDAMKACGLSVDDVAMLVPHQVNARIIDAALKRLEFPREKCFSNIDRYGNTSAASIPIA 699
            A+RA A A I   +LD IIV TVTPD   PSTA +VQ ++GA NA AFDL AAC GF+YGL+ A+ +IATGM+R  L+IGA+TL+R  DYTDR TCILFGDGAGAV++    E RG   + L ADG  S+++ + AGG+R P++  TVA +QHF+ + GR VFKFA         +A++  G+  +D+ +L+PHQ N RII +AL+RLE P EKC  N+DRYGN SAASIP+A
Sbjct:   59 AVRALAAAGITADQLDLIIVSTVTPDMFFPSTACIVQEKLGAKNAAAFDLSAACTGFIYGLANASGLIATGMYRYALVIGAETLSRITDYTDRNTCILFGDGAGAVVLGQVPEGRGFRSFKLGADGGGSELLALRAGGSRLPASETTVAEKQHFLYMNGRDVFKFAVRIMGSAAEEALELAGMGKEDIDLLIPHQANIRIIQSALERLELPEEKCMINVDRYGNMSAASIPVA 291          
BLAST of mRNA_M-pyrifera_M_contig98410.22664.1 vs. uniprot
Match: A0A349UKN5_9BACT (3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A349UKN5_9BACT)

HSP 1 Score: 259 bits (661), Expect = 8.400e-83
Identity = 125/234 (53.42%), Postives = 171/234 (73.08%), Query Frame = 1
Query:    1 AMRACADANIYPSELDRIIVCTVTPDQIVPSTASLVQARIGAMNAGAFDLQAACAGFVYGLSVAASMIATGMHRRVLLIGADTLTRYVDYTDRKTCILFGDGAGAVIMAATDENR-GVMHYSLHADGTHSQVIGIPAGGTRTPSNHDTVALRQHFIQVEGRRVFKFATNAFVDLTRDAMKACGLSVDDVAMLVPHQVNARIIDAALKRLEFPREKCFSNIDRYGNTSAASIPIA 699
            A  A  DA   P++LD I+ CT+TP+ + P+TA  +Q  +GA +  AFD+ AAC+G++YGL+VA+  I  GM+RRVL++GA+ LTR+ D+TDR +CILFGDGAGA ++ A D++R GV++  LHADG     I +PAGG RTP++H TV   QH+I + GR V+KFA      L  D M+ CGL+VDDV ++VPHQVN RII +A ++L+FP +K + NIDR+GNTSAASIPIA
Sbjct:   63 ARAALEDAKCAPTDLDLILCCTITPEMVFPATACFIQQSLGATDVPAFDISAACSGWLYGLAVASQFIENGMYRRVLVVGAEALTRFADFTDRGSCILFGDGAGAAVLEACDDDRRGVLYNVLHADGAGWDFIHVPAGGARTPASHQTVDDHQHYIHMRGRDVYKFAVEKMQWLLADCMEHCGLTVDDVDLVVPHQVNIRIISSATEKLKFPIDKVYVNIDRFGNTSAASIPIA 296          
BLAST of mRNA_M-pyrifera_M_contig98410.22664.1 vs. uniprot
Match: A0A7X8YZH3_9BACT (3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X8YZH3_9BACT)

HSP 1 Score: 259 bits (661), Expect = 8.400e-83
Identity = 128/231 (55.41%), Postives = 167/231 (72.29%), Query Frame = 1
Query:   10 ACADANIYPSELDRIIVCTVTPDQIVPSTASLVQARIGAMNAGAFDLQAACAGFVYGLSVAASMIATGMHRRVLLIGADTLTRYVDYTDRKTCILFGDGAGAVIMAATDE-NRGVMHYSLHADGTHSQVIGIPAGGTRTPSNHDTVALRQHFIQVEGRRVFKFATNAFVDLTRDAMKACGLSVDDVAMLVPHQVNARIIDAALKRLEFPREKCFSNIDRYGNTSAASIPIA 699
            A  +A   P++LD II CTVTP+   P+TA  VQA++GA    AFD+ AAC+GF+YGL+ A   I TGM+RR+L+IGADTL+R  DYTDR +CILFGDGAGAV++ AT E N+GV++  +HADGT    I +P GG+RTP+ H +V    HF+++ GR V+KFA      L  D M  CGLS DDVAM++PHQVN RII +A ++  FP EK + NI+R+GNTSAASIP+A
Sbjct:   66 ALKNAGFEPTDLDLIICCTVTPEMPFPATACFVQAQLGATGVPAFDIIAACSGFLYGLTTACKYIETGMYRRILVIGADTLSRVTDYTDRGSCILFGDGAGAVVLEATTEPNKGVIYNVMHADGTGWDFIHVPGGGSRTPATHKSVDDGMHFVKMRGRDVYKFAVEKMQWLLGDCMSKCGLSTDDVAMVIPHQVNVRIIASATEKYNFPLEKVYMNIERFGNTSAASIPVA 296          
BLAST of mRNA_M-pyrifera_M_contig98410.22664.1 vs. uniprot
Match: A0A358QT97_9FIRM (3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Desulfotomaculum sp. TaxID=41211 RepID=A0A358QT97_9FIRM)

HSP 1 Score: 256 bits (653), Expect = 1.740e-81
Identity = 126/233 (54.08%), Postives = 167/233 (71.67%), Query Frame = 1
Query:    1 AMRACADANIYPSELDRIIVCTVTPDQIVPSTASLVQARIGAMNAGAFDLQAACAGFVYGLSVAASMIATGMHRRVLLIGADTLTRYVDYTDRKTCILFGDGAGAVIMAATDENRGVMHYSLHADGTHSQVIGIPAGGTRTPSNHDTVALRQHFIQVEGRRVFKFATNAFVDLTRDAMKACGLSVDDVAMLVPHQVNARIIDAALKRLEFPREKCFSNIDRYGNTSAASIPIA 699
            A RA ADA + P E+D IIV T TPD + P+ A +VQ R+GA+NAGAFDL A C GF+YGLSVA   + +GM+++VL+IGA+TL+R VD+ DR TC+LFGDGAGA ++       G++H  L ADG+  Q + +PAGG+R P++ +TV  R H+ ++ GR VFKFA  A  D + +A+ A GL+V DV  L+PHQ N RII+AA KRLE P EK   N+DR+GNTS ASIP+A
Sbjct:   64 AGRALADAGLEPGEIDLIIVSTNTPDSLFPAAACIVQDRLGAVNAGAFDLLAGCTGFLYGLSVAQGFVVSGMYKKVLVIGAETLSRIVDWEDRNTCVLFGDGAGAAVVGPVSGGYGLIHTRLGADGSGGQHLCVPAGGSRIPASRETVEQRLHYARMNGREVFKFAVRACGDGSLEALAAAGLTVKDVDFLIPHQANIRIIEAAAKRLELPMEKVLVNVDRFGNTSTASIPMA 296          
BLAST of mRNA_M-pyrifera_M_contig98410.22664.1 vs. uniprot
Match: UPI000405F5E6 (ketoacyl-ACP synthase III n=1 Tax=Cohnella thermotolerans TaxID=329858 RepID=UPI000405F5E6)

HSP 1 Score: 255 bits (652), Expect = 1.810e-81
Identity = 123/233 (52.79%), Postives = 163/233 (69.96%), Query Frame = 1
Query:    1 AMRACADANIYPSELDRIIVCTVTPDQIVPSTASLVQARIGAMNAGAFDLQAACAGFVYGLSVAASMIATGMHRRVLLIGADTLTRYVDYTDRKTCILFGDGAGAVIMAATDENRGVMHYSLHADGTHSQVIGIPAGGTRTPSNHDTVALRQHFIQVEGRRVFKFATNAFVDLTRDAMKACGLSVDDVAMLVPHQVNARIIDAALKRLEFPREKCFSNIDRYGNTSAASIPIA 699
            +++A A A I   +LD IIV TVTPD   PSTA +VQ ++GA NA AFDL AAC+GF+YGL+ A+  IATG +R VL++GADTL+R  DYTDR TC+LFGDGAGAV++    E RG   + L +DG+ + ++ IP GG+R P+   TVA  +HF+ + GR VFKFA         +A+   GLS +D+ +L+PHQ N RII +AL+RL  P +KC  N+DRYGN SAASIP+A
Sbjct:   62 SLKALAAAGITADQLDLIIVATVTPDMFCPSTACIVQEKLGAKNAAAFDLSAACSGFIYGLANASGFIATGTYRYVLVVGADTLSRITDYTDRNTCVLFGDGAGAVVLGRVPEGRGFRSFKLGSDGSGADLLCIPGGGSRLPATETTVAEGRHFLNMNGRDVFKFAVRIMGSAAEEALAMAGLSKEDIDLLIPHQANIRIIQSALERLNLPEDKCMINVDRYGNMSAASIPVA 294          
BLAST of mRNA_M-pyrifera_M_contig98410.22664.1 vs. uniprot
Match: A0A0U2W6W7_9BACL (3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=Paenibacillus TaxID=44249 RepID=A0A0U2W6W7_9BACL)

HSP 1 Score: 254 bits (649), Expect = 5.150e-81
Identity = 123/233 (52.79%), Postives = 161/233 (69.10%), Query Frame = 1
Query:    1 AMRACADANIYPSELDRIIVCTVTPDQIVPSTASLVQARIGAMNAGAFDLQAACAGFVYGLSVAASMIATGMHRRVLLIGADTLTRYVDYTDRKTCILFGDGAGAVIMAATDENRGVMHYSLHADGTHSQVIGIPAGGTRTPSNHDTVALRQHFIQVEGRRVFKFATNAFVDLTRDAMKACGLSVDDVAMLVPHQVNARIIDAALKRLEFPREKCFSNIDRYGNTSAASIPIA 699
            A RA ADA +   ELD I+V T+TPD   PSTA L+Q ++GA  A AFDL AAC+GF+YGL+  +SMIA+GM+ R L++GA+ L+R  DYTDR TCILFGDGAGAV++    E RG   + L ADG   +++ I  GG+R P+  ++VA R+HFI++ G  VFKFA         +A++  G+   D+ +LVPHQ N RII +AL RL+ P EKC  N+DRYGN SAASIPIA
Sbjct:   62 AERALADAGVSAEELDLIVVATITPDMFFPSTACLLQEKLGAKQAAAFDLSAACSGFIYGLATVSSMIASGMYGRALVVGAECLSRVTDYTDRNTCILFGDGAGAVVLGRVPEGRGFRSFELGADGAGGELLKICGGGSRLPATAESVAGRRHFIEMAGSEVFKFAVRIMGSAAEEALRKAGMDKSDIDLLVPHQANIRIIQSALNRLDLPEEKCMINLDRYGNVSAASIPIA 294          
BLAST of mRNA_M-pyrifera_M_contig98410.22664.1 vs. uniprot
Match: A0A1Z5HNH2_9THEO (3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Calderihabitans maritimus TaxID=1246530 RepID=A0A1Z5HNH2_9THEO)

HSP 1 Score: 254 bits (648), Expect = 1.270e-80
Identity = 121/233 (51.93%), Postives = 163/233 (69.96%), Query Frame = 1
Query:    1 AMRACADANIYPSELDRIIVCTVTPDQIVPSTASLVQARIGAMNAGAFDLQAACAGFVYGLSVAASMIATGMHRRVLLIGADTLTRYVDYTDRKTCILFGDGAGAVIMAATDENRGVMHYSLHADGTHSQVIGIPAGGTRTPSNHDTVALRQHFIQVEGRRVFKFATNAFVDLTRDAMKACGLSVDDVAMLVPHQVNARIIDAALKRLEFPREKCFSNIDRYGNTSAASIPIA 699
            A RA  DA + P ++D IIV TVTPD + P+TA LVQ  IGA  A AFDL+AAC+GF+YGL + + M+ATG++  VL+I ADTL++ VD+TDR TC+LFGDGAGA ++    E  G++   L ADG  S+++ +PAGG+R PS+ +TV  R H+I + G  VFKFA     +    A++ CGLS  D+  L+PHQ N RI++AALKRLE P +K + N+DRYGN S ASI +A
Sbjct:   64 AQRALEDAGVNPEDVDLIIVATVTPDMLFPATACLVQKAIGAERAAAFDLEAACSGFIYGLGIGSQMVATGLYDTVLVIAADTLSKIVDWTDRNTCVLFGDGAGAAVLRPVSEGEGILGNYLKADGNGSELLKVPAGGSRLPSSVETVTQRLHYIHMNGNEVFKFAVRIMEEAALKALEQCGLSKKDIDYLIPHQANIRIVEAALKRLEVPSDKVYINLDRYGNISGASIAVA 296          
BLAST of mRNA_M-pyrifera_M_contig98410.22664.1 vs. uniprot
Match: A0A1I1C784_9BACL (3-oxoacyl-[acyl-carrier-protein] synthase 3 n=3 Tax=unclassified Cohnella TaxID=2636738 RepID=A0A1I1C784_9BACL)

HSP 1 Score: 253 bits (646), Expect = 1.460e-80
Identity = 124/233 (53.22%), Postives = 163/233 (69.96%), Query Frame = 1
Query:    1 AMRACADANIYPSELDRIIVCTVTPDQIVPSTASLVQARIGAMNAGAFDLQAACAGFVYGLSVAASMIATGMHRRVLLIGADTLTRYVDYTDRKTCILFGDGAGAVIMAATDENRGVMHYSLHADGTHSQVIGIPAGGTRTPSNHDTVALRQHFIQVEGRRVFKFATNAFVDLTRDAMKACGLSVDDVAMLVPHQVNARIIDAALKRLEFPREKCFSNIDRYGNTSAASIPIA 699
            A++A A ANI   +LD IIV T+TPD   PSTA ++Q R+GA  A AFDL AAC+GF+YGL+ A+  IA GM++  L+IGADTL+R  DYTDR TC+LFGDGAGAV++    E RG   + L ADG+    + I  GG+R PS+ +TV  ++HFI++ GR VFKFA     +   +A++  G+   ++ +LVPHQ N RII A+L+RLE P EKC  NIDRYGN SAASIP+A
Sbjct:   62 AVKALASANITADQLDLIIVATITPDMFFPSTACILQDRLGAKKAAAFDLSAACSGFIYGLANASGFIALGMYKYALVIGADTLSRITDYTDRNTCVLFGDGAGAVVIGEVPEGRGFKSFELGADGSGGPHLRIQGGGSRQPSSEETVGGKRHFIEMNGREVFKFAARIMGNAAEEALRKAGVDKSEIDLLVPHQANIRIIQASLERLELPPEKCVINIDRYGNMSAASIPLA 294          
BLAST of mRNA_M-pyrifera_M_contig98410.22664.1 vs. uniprot
Match: A0A0S7XF11_9BACT (3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Planctomycetes bacterium DG_23 TaxID=1703414 RepID=A0A0S7XF11_9BACT)

HSP 1 Score: 253 bits (645), Expect = 2.140e-80
Identity = 118/231 (51.08%), Postives = 170/231 (73.59%), Query Frame = 1
Query:    7 RACADANIYPSELDRIIVCTVTPDQIVPSTASLVQARIGAMNAGAFDLQAACAGFVYGLSVAASMIATGMHRRVLLIGADTLTRYVDYTDRKTCILFGDGAGAVIMAATDENRGVMHYSLHADGTHSQVIGIPAGGTRTPSNHDTVALRQHFIQVEGRRVFKFATNAFVDLTRDAMKACGLSVDDVAMLVPHQVNARIIDAALKRLEFPREKCFSNIDRYGNTSAASIPIA 699
            RA   A I P +LD IIV T+TPD   PSTA ++Q R+GA  +GAFDL AAC+GF+YG+S A+  +A G  +  L++GA+ L+ + DYTDR +C+LFGDGAGA ++  TDE RGV++ +L ADG+ ++ + +PAGG+R P++H TV  R H++++ GR  FKFA     DL  +A++   ++V+D+A+++PHQVN RI+DAA K++  P+EK + NIDRYGNTSAAS+PIA
Sbjct:   65 RALEAAKIKPEDLDLIIVGTITPDYFFPSTACILQNRLGANGSGAFDLLAACSGFIYGVSAASEYLARGSCKTALIVGAEALSTFTDYTDRGSCVLFGDGAGAAVLVKTDEPRGVLYTTLGADGSGAEYMILPAGGSRLPASHQTVDRRLHYMKIRGRETFKFAVTKMQDLLVEAIERLEIAVNDIALVIPHQVNIRILDAAAKKIHLPKEKMYINIDRYGNTSAASVPIA 295          
BLAST of mRNA_M-pyrifera_M_contig98410.22664.1 vs. uniprot
Match: A0A841TAV4_9BACL (3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=Cohnella lubricantis TaxID=2163172 RepID=A0A841TAV4_9BACL)

HSP 1 Score: 252 bits (644), Expect = 2.680e-80
Identity = 121/233 (51.93%), Postives = 162/233 (69.53%), Query Frame = 1
Query:    1 AMRACADANIYPSELDRIIVCTVTPDQIVPSTASLVQARIGAMNAGAFDLQAACAGFVYGLSVAASMIATGMHRRVLLIGADTLTRYVDYTDRKTCILFGDGAGAVIMAATDENRGVMHYSLHADGTHSQVIGIPAGGTRTPSNHDTVALRQHFIQVEGRRVFKFATNAFVDLTRDAMKACGLSVDDVAMLVPHQVNARIIDAALKRLEFPREKCFSNIDRYGNTSAASIPIA 699
            +++A   A I   +LD I+VCT+TPD   PSTA LVQ ++GA NA A+DL AAC+GF+YGL+ A+  IA G ++ VL++GA+TL+R  DYTDR TCILFGDGAGAV++    E RG   + L ADG+   +I IP GG+R PS  +TVA  +H++ + GR V+KFA         +A++  GL  DD+ +L+PHQ N RII +A++RL  P EKC  NIDRYGN SAASIP+A
Sbjct:   59 SVQALKAAGITADQLDLIVVCTITPDMFFPSTACLVQEKLGAKNAAAYDLSAACSGFIYGLANASGFIAMGTYKYVLVVGAETLSRITDYTDRNTCILFGDGAGAVVLGQVPEGRGFQSFKLGADGSGGDLINIPGGGSRLPSTAETVAEGKHYLYMNGRDVYKFAVRIMGGAAEEALEMAGLGKDDIDLLIPHQANIRIIQSAVERLNLPEEKCAINIDRYGNMSAASIPVA 291          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98410.22664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X0SSX7_9BACL3.120e-8454.943-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Ta... [more]
A0A349UKN5_9BACT8.400e-8353.423-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Ta... [more]
A0A7X8YZH3_9BACT8.400e-8355.413-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Ta... [more]
A0A358QT97_9FIRM1.740e-8154.083-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Ta... [more]
UPI000405F5E61.810e-8152.79ketoacyl-ACP synthase III n=1 Tax=Cohnella thermot... [more]
A0A0U2W6W7_9BACL5.150e-8152.793-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Ta... [more]
A0A1Z5HNH2_9THEO1.270e-8051.933-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Ta... [more]
A0A1I1C784_9BACL1.460e-8053.223-oxoacyl-[acyl-carrier-protein] synthase 3 n=3 Ta... [more]
A0A0S7XF11_9BACT2.140e-8051.083-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Ta... [more]
A0A841TAV4_9BACL2.680e-8051.933-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98410contigM-pyrifera_M_contig98410:2..700 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score250.4
Seed ortholog evalue8.4e-64
Seed eggNOG ortholog273068.TTE1475
Preferred namefabH
KEGG rclassRC00004,RC02729,RC02888
KEGG koko:K00648
KEGG ReactionR10707
KEGG Pathwayko00061,ko01100,ko01212,map00061,map01100,map01212
KEGG ModuleM00082,M00083
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
EggNOG OGs1TP0K@1239,248V8@186801,42ER1@68295,COG0332@1,COG0332@2
EC2.3.1.180
COG Functional cat.I
Best tax levelThermoanaerobacterales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Exons1
Model size699
Cds size696
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816901.7290096-UTR-M-pyrifera_M_contig98410:1..41622816901.7290096-UTR-M-pyrifera_M_contig98410:1..4Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig98410 2..4 +
1692278245.335606-UTR-M-pyrifera_M_contig98410:1..41692278245.335606-UTR-M-pyrifera_M_contig98410:1..4Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig98410 2..4 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816901.7395482-CDS-M-pyrifera_M_contig98410:4..7001622816901.7395482-CDS-M-pyrifera_M_contig98410:4..700Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98410 5..700 +
1692278245.3499856-CDS-M-pyrifera_M_contig98410:4..7001692278245.3499856-CDS-M-pyrifera_M_contig98410:4..700Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98410 5..700 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98410.22664.1prot_M-pyrifera_M_contig98410.22664.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig98410 5..700 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig98410.22664.1

>prot_M-pyrifera_M_contig98410.22664.1 ID=prot_M-pyrifera_M_contig98410.22664.1|Name=mRNA_M-pyrifera_M_contig98410.22664.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=232bp
MRACADANIYPSELDRIIVCTVTPDQIVPSTASLVQARIGAMNAGAFDLQ
AACAGFVYGLSVAASMIATGMHRRVLLIGADTLTRYVDYTDRKTCILFGD
GAGAVIMAATDENRGVMHYSLHADGTHSQVIGIPAGGTRTPSNHDTVALR
QHFIQVEGRRVFKFATNAFVDLTRDAMKACGLSVDDVAMLVPHQVNARII
DAALKRLEFPREKCFSNIDRYGNTSAASIPIA
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mRNA from alignment at M-pyrifera_M_contig98410:2..700+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig98410.22664.1 ID=mRNA_M-pyrifera_M_contig98410.22664.1|Name=mRNA_M-pyrifera_M_contig98410.22664.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=699bp|location=Sequence derived from alignment at M-pyrifera_M_contig98410:2..700+ (Macrocystis pyrifera P11B4 male)
GCCATGAGAGCCTGCGCCGATGCAAACATTTATCCGTCGGAACTCGACAG GATCATCGTGTGCACGGTGACCCCCGATCAAATTGTGCCTTCCACGGCCT CGCTCGTTCAGGCCCGCATCGGAGCCATGAACGCCGGAGCTTTCGATCTT CAGGCGGCCTGCGCTGGGTTTGTATACGGCCTTAGCGTGGCTGCCTCGAT GATTGCCACGGGCATGCATCGACGGGTGCTGCTGATTGGTGCCGATACGC TTACCCGATACGTCGACTACACCGATCGCAAGACCTGCATCTTGTTTGGC GACGGAGCCGGGGCTGTGATCATGGCCGCCACCGACGAGAATCGCGGGGT CATGCACTACAGCCTGCACGCCGATGGCACTCACTCGCAGGTGATTGGCA TCCCGGCTGGCGGAACACGTACCCCGTCGAACCACGACACGGTTGCTCTG CGTCAGCACTTCATTCAGGTCGAAGGACGACGGGTGTTCAAGTTCGCCAC CAACGCATTTGTGGATCTGACTCGCGACGCGATGAAGGCCTGCGGGCTAA GTGTCGACGATGTTGCGATGCTCGTACCGCACCAGGTCAACGCTCGTATC ATCGACGCGGCTTTGAAACGCCTGGAATTCCCCCGCGAGAAGTGCTTCTC GAATATCGACCGCTACGGAAACACCTCGGCCGCAAGCATCCCAATCGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig98410:2..700+

>mRNA_M-pyrifera_M_contig98410.22664.1 ID=mRNA_M-pyrifera_M_contig98410.22664.1|Name=mRNA_M-pyrifera_M_contig98410.22664.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1392bp|location=Sequence derived from alignment at M-pyrifera_M_contig98410:2..700+ (Macrocystis pyrifera P11B4 male)
ATGAGAGCCTGCGCCGATGCAAACATTTATCCGTCGGAACTCGACAGGAT
CATCGTGTGCACGGTGACCCCCGATCAAATTGTGCCTTCCACGGCCTCGC
TCGTTCAGGCCCGCATCGGAGCCATGAACGCCGGAGCTTTCGATCTTCAG
GCGGCCTGCGCTGGGTTTGTATACGGCCTTAGCGTGGCTGCCTCGATGAT
TGCCACGGGCATGCATCGACGGGTGCTGCTGATTGGTGCCGATACGCTTA
CCCGATACGTCGACTACACCGATCGCAAGACCTGCATCTTGTTTGGCGAC
GGAGCCGGGGCTGTGATCATGGCCGCCACCGACGAGAATCGCGGGGTCAT
GCACTACAGCCTGCACGCCGATGGCACTCACTCGCAGGTGATTGGCATCC
CGGCTGGCGGAACACGTACCCCGTCGAACCACGACACGGTTGCTCTGCGT
CAGCACTTCATTCAGGTCGAAGGACGACGGGTGTTCAAGTTCGCCACCAA
CGCATTTGTGGATCTGACTCGCGACGCGATGAAGGCCTGCGGGCTAAGTG
TCGACGATGTTGCGATGCTCGTACCGCACCAGGTCAACGCTCGTATCATC
GACGCGGCTTTGAAACGCCTGGAATTCCCCCGCGAGAAGTGCTTCTCGAA
TATCGACCGCTACGGAAACACCTCGGCCGCAAGCATCCCAATCGCCATGA
GAGCCTGCGCCGATGCAAACATTTATCCGTCGGAACTCGACAGGATCATC
GTGTGCACGGTGACCCCCGATCAAATTGTGCCTTCCACGGCCTCGCTCGT
TCAGGCCCGCATCGGAGCCATGAACGCCGGAGCTTTCGATCTTCAGGCGG
CCTGCGCTGGGTTTGTATACGGCCTTAGCGTGGCTGCCTCGATGATTGCC
ACGGGCATGCATCGACGGGTGCTGCTGATTGGTGCCGATACGCTTACCCG
ATACGTCGACTACACCGATCGCAAGACCTGCATCTTGTTTGGCGACGGAG
CCGGGGCTGTGATCATGGCCGCCACCGACGAGAATCGCGGGGTCATGCAC
TACAGCCTGCACGCCGATGGCACTCACTCGCAGGTGATTGGCATCCCGGC
TGGCGGAACACGTACCCCGTCGAACCACGACACGGTTGCTCTGCGTCAGC
ACTTCATTCAGGTCGAAGGACGACGGGTGTTCAAGTTCGCCACCAACGCA
TTTGTGGATCTGACTCGCGACGCGATGAAGGCCTGCGGGCTAAGTGTCGA
CGATGTTGCGATGCTCGTACCGCACCAGGTCAACGCTCGTATCATCGACG
CGGCTTTGAAACGCCTGGAATTCCCCCGCGAGAAGTGCTTCTCGAATATC
GACCGCTACGGAAACACCTCGGCCGCAAGCATCCCAATCGCC
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