mRNA_M-pyrifera_M_contig97991.22564.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97991.22564.1 vs. uniprot
Match: A0A7R9YMH4_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YMH4_DIALT) HSP 1 Score: 217 bits (552), Expect = 9.450e-68 Identity = 104/181 (57.46%), Postives = 127/181 (70.17%), Query Frame = 1 Query: 4 RFYDVTGFMRRHPGGSIIKYGVGTDATQAFNEFHSRSTRAKRMLKALPSREAPASEVPETAREEVVRDFVQLRRELVEEGMFRPSPLHMAYRVAELVVMHAVGIALLLNGWWAAAIVVLGIAQGRCGWFMHEAGHYSMTGIPSVDRRIQELAYGLGCGMSAAFWRNQPNKHHAPPQPLGRD 546 R YDVT F++RHPGG II Y VGTDAT A+ +FH RS +A ++LK+LPSR A P A ++ DF + R+L EG F PSP H+AYR+AE+V MH G AL+ +G+ A I +LG+ QGRCGW MHE GHYS+TG S+DR IQ YGLGCGMS A+WRNQ NKHHA PQ L D Sbjct: 52 RAYDVTAFIKRHPGGKIIAYQVGTDATDAYKQFHVRSKKADKVLKSLPSRPLRAGYEPRRAA--LLADFAEFTRQLEAEGKFEPSPRHVAYRLAEVVAMHVAGAALIWHGYTLAGIAMLGVVQGRCGWLMHEGGHYSLTGNISIDRAIQVAVYGLGCGMSGAWWRNQHNKHHATPQKLKHD 230
BLAST of mRNA_M-pyrifera_M_contig97991.22564.1 vs. uniprot
Match: A0A7S0LHQ3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHQ3_9EUKA) HSP 1 Score: 216 bits (550), Expect = 2.140e-67 Identity = 101/183 (55.19%), Postives = 131/183 (71.58%), Query Frame = 1 Query: 1 GRFYDVTGFMRRHPGGSIIKYGVGTDATQAFNEFHSRSTRAKRMLKALPSREAPASEVPETAREEVVRDFVQLRRELVEEGMFRPSPLHMAYRVAELVVMHAVGIALLLNG-WWAAAIVVLGIAQGRCGWFMHEAGHYSMTGIPSVDRRIQELAYGLGCGMSAAFWRNQPNKHHAPPQPLGRD 546 GR YDV+ F++RHPGGS+IK+ +GTDA+ A+N FH RS +A +ML++LPSRE E + + RD+ LR+EL+ EG F+P+P H+AYR E+ M+ G+AL+ +G WW AIV GIAQGRCGW MHE GHYS+TG +DR +Q + YGLGCGMS +WRNQ NKHH PQ LG D Sbjct: 72 GRVYDVSSFVKRHPGGSVIKFQLGTDASDAYNNFHIRSKKADKMLRSLPSREVE----DEYHGDALSRDYEALRQELIAEGYFKPNPAHVAYRFVEVAAMYCAGVALIWSGRWWLGAIVA-GIAQGRCGWLMHEGGHYSLTGNIKIDRHLQMVTYGLGCGMSGCYWRNQHNKHHTTPQKLGAD 249
BLAST of mRNA_M-pyrifera_M_contig97991.22564.1 vs. uniprot
Match: A0A8J5X897_DIALT (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X897_DIALT) HSP 1 Score: 217 bits (552), Expect = 4.690e-66 Identity = 104/181 (57.46%), Postives = 127/181 (70.17%), Query Frame = 1 Query: 4 RFYDVTGFMRRHPGGSIIKYGVGTDATQAFNEFHSRSTRAKRMLKALPSREAPASEVPETAREEVVRDFVQLRRELVEEGMFRPSPLHMAYRVAELVVMHAVGIALLLNGWWAAAIVVLGIAQGRCGWFMHEAGHYSMTGIPSVDRRIQELAYGLGCGMSAAFWRNQPNKHHAPPQPLGRD 546 R YDVT F++RHPGG II Y VGTDAT A+ +FH RS +A ++LK+LPSR A P A ++ DF + R+L EG F PSP H+AYR+AE+V MH G AL+ +G+ A I +LG+ QGRCGW MHE GHYS+TG S+DR IQ YGLGCGMS A+WRNQ NKHHA PQ L D Sbjct: 36 RAYDVTAFIKRHPGGKIIAYQVGTDATDAYKQFHVRSKKADKVLKSLPSRPLRAGYEPRRAA--LLADFAEFTRQLEAEGKFEPSPRHVAYRLAEVVAMHVAGAALIWHGYTLAGIAMLGVVQGRCGWLMHEGGHYSLTGNISIDRAIQVAVYGLGCGMSGAWWRNQHNKHHATPQKLKHD 214
BLAST of mRNA_M-pyrifera_M_contig97991.22564.1 vs. uniprot
Match: A0A0M4MT30_DIALT (Delta 5 desaturase (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A0M4MT30_DIALT) HSP 1 Score: 211 bits (538), Expect = 2.370e-64 Identity = 98/182 (53.85%), Postives = 129/182 (70.88%), Query Frame = 1 Query: 1 GRFYDVTGFMRRHPGGSIIKYGVGTDATQAFNEFHSRSTRAKRMLKALPSREAPASEVPETAREEVVRDFVQLRRELVEEGMFRPSPLHMAYRVAELVVMHAVGIALLLNGWWAAAIVVLGIAQGRCGWFMHEAGHYSMTGIPSVDRRIQELAYGLGCGMSAAFWRNQPNKHHAPPQPLGRD 546 GR YDV+ F++RHPGGSIIK+ +G DAT A+N FH RS +A +ML +LPSR A A + A++ + +DF +LR +L EEG F P+ H+AYR+ E++ M+ GI L+ +G+W +V G+AQGRCGW HE GHYS+TG +DR +Q YGLGCGMS +WRNQ NKHHA PQ LG D Sbjct: 12 GRVYDVSSFVKRHPGGSIIKFQLGADATDAYNNFHMRSKKADKMLHSLPSRPAHA----DYAQDALSQDFEKLRLQLKEEGYFEPNLRHVAYRIIEVIAMYWAGIQLIWSGYWFLGAIVAGLAQGRCGWLQHEGGHYSLTGNIKIDRHLQMAIYGLGCGMSGCYWRNQHNKHHATPQKLGTD 189
BLAST of mRNA_M-pyrifera_M_contig97991.22564.1 vs. uniprot
Match: D5FAD_REBSA (Acyl-lipid (8-3)-desaturase n=1 Tax=Rebecca salina TaxID=561169 RepID=D5FAD_REBSA) HSP 1 Score: 212 bits (539), Expect = 4.260e-64 Identity = 101/181 (55.80%), Postives = 126/181 (69.61%), Query Frame = 1 Query: 4 RFYDVTGFMRRHPGGSIIKYGVGTDATQAFNEFHSRSTRAKRMLKALPSREAPASEVPETAREEVVRDFVQLRRELVEEGMFRPSPLHMAYRVAELVVMHAVGIALLLNGWWAAAIVVLGIAQGRCGWFMHEAGHYSMTGIPSVDRRIQELAYGLGCGMSAAFWRNQPNKHHAPPQPLGRD 546 R YDVT F++RHPGG II Y VGTDAT A+ +FH RS +A +MLK+LPSR P A +++ DF + ++L EGMF PS H+AYR+AE++ MH G AL+ +G+ A I +LG+ QGRCGW MHE GHYS+TG + DR IQ YGLGCGMS A+WRNQ NKHHA PQ L D Sbjct: 36 RAYDVTNFVKRHPGGKIIAYQVGTDATDAYKQFHVRSAKADKMLKSLPSRPVHKGYSPRRA--DLIADFQEFTKQLEAEGMFEPSLPHVAYRLAEVIAMHVAGAALIWHGYTFAGIAMLGVVQGRCGWLMHEGGHYSLTGNIAFDRAIQVACYGLGCGMSGAWWRNQHNKHHATPQKLQHD 214
BLAST of mRNA_M-pyrifera_M_contig97991.22564.1 vs. uniprot
Match: F2YQ24_ISOGA (Delta5 desaturase n=1 Tax=Isochrysis galbana TaxID=37099 RepID=F2YQ24_ISOGA) HSP 1 Score: 212 bits (539), Expect = 6.500e-64 Identity = 97/182 (53.30%), Postives = 129/182 (70.88%), Query Frame = 1 Query: 1 GRFYDVTGFMRRHPGGSIIKYGVGTDATQAFNEFHSRSTRAKRMLKALPSREAPASEVPETAREEVVRDFVQLRRELVEEGMFRPSPLHMAYRVAELVVMHAVGIALLLNGWWAAAIVVLGIAQGRCGWFMHEAGHYSMTGIPSVDRRIQELAYGLGCGMSAAFWRNQPNKHHAPPQPLGRD 546 GR YDV+ F++RHPGGS+IK+ +G DA+ A+N FH RS +A +ML +LPSR A A A++++ RDF +LR EL EEG F P+ +H++YR E++ M+ G+ L+ +G+W +V GIAQGRCGW HE GHYS+TG +DR +Q YGLGCGMS +WRNQ NKHHA PQ LG D Sbjct: 51 GRVYDVSSFVKRHPGGSVIKFQLGADASDAYNNFHVRSKKADKMLYSLPSRPAEAG----YAQDDISRDFEKLRLELKEEGYFEPNLVHVSYRCVEVLAMYWAGVQLIWSGYWFLGAIVAGIAQGRCGWLQHEGGHYSLTGNIKIDRHLQMAIYGLGCGMSGCYWRNQHNKHHATPQKLGTD 228
BLAST of mRNA_M-pyrifera_M_contig97991.22564.1 vs. uniprot
Match: H9BK45_ISOGA (Delta-5 fatty acid desaturase n=1 Tax=Isochrysis galbana TaxID=37099 RepID=H9BK45_ISOGA) HSP 1 Score: 211 bits (538), Expect = 8.520e-64 Identity = 98/182 (53.85%), Postives = 129/182 (70.88%), Query Frame = 1 Query: 1 GRFYDVTGFMRRHPGGSIIKYGVGTDATQAFNEFHSRSTRAKRMLKALPSREAPASEVPETAREEVVRDFVQLRRELVEEGMFRPSPLHMAYRVAELVVMHAVGIALLLNGWWAAAIVVLGIAQGRCGWFMHEAGHYSMTGIPSVDRRIQELAYGLGCGMSAAFWRNQPNKHHAPPQPLGRD 546 GR YDV+ F++RHPGGSIIK+ +G DAT A+N FH RS +A +ML +LPSR A A + A++ + +DF +LR +L EEG F P+ H+AYR+ E++ M+ GI L+ +G+W +V G+AQGRCGW HE GHYS+TG +DR +Q YGLGCGMS +WRNQ NKHHA PQ LG D Sbjct: 47 GRVYDVSSFVKRHPGGSIIKFQLGADATDAYNNFHMRSKKADKMLHSLPSRPAHA----DYAQDALSQDFEKLRLQLKEEGYFEPNLRHVAYRIIEVIAMYWAGIQLIWSGYWFLGAIVAGLAQGRCGWLQHEGGHYSLTGNIKIDRHLQMAIYGLGCGMSGCYWRNQHNKHHATPQKLGTD 224
BLAST of mRNA_M-pyrifera_M_contig97991.22564.1 vs. uniprot
Match: A0A7S0IXG1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IXG1_9EUKA) HSP 1 Score: 211 bits (538), Expect = 1.450e-63 Identity = 95/182 (52.20%), Postives = 128/182 (70.33%), Query Frame = 1 Query: 1 GRFYDVTGFMRRHPGGSIIKYGVGTDATQAFNEFHSRSTRAKRMLKALPSREAPASEVPETAREEVVRDFVQLRRELVEEGMFRPSPLHMAYRVAELVVMHAVGIALLLNGWWAAAIVVLGIAQGRCGWFMHEAGHYSMTGIPSVDRRIQELAYGLGCGMSAAFWRNQPNKHHAPPQPLGRD 546 GR YDV+ F++ HPGGS+IK +GTDAT AFN FH RS +A +ML++LPSRE + + + + RD+ LR++L+ EG F P+ H+AYR AE++ M+ G+AL+ +GWW +V G+AQGRCGW HE GHYS+TG +DR +Q + YG+GCGMS +WRNQ NKHH PQ LG D Sbjct: 70 GRVYDVSSFIKSHPGGSVIKLQLGTDATDAFNNFHIRSKKADKMLRSLPSRELDTGKYQQ---DRLSRDYEALRQQLLAEGYFEPNLAHVAYRFAEVIAMYFAGVALVWSGWWWFGALVAGLAQGRCGWLQHEGGHYSLTGNIKMDRHLQMVTYGIGCGMSGCYWRNQHNKHHTTPQKLGAD 248
BLAST of mRNA_M-pyrifera_M_contig97991.22564.1 vs. uniprot
Match: A0A7S0GRM3_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GRM3_9EUKA) HSP 1 Score: 209 bits (532), Expect = 2.650e-63 Identity = 100/182 (54.95%), Postives = 126/182 (69.23%), Query Frame = 1 Query: 1 GRFYDVTGFMRRHPGGSIIKYGVGTDATQAFNEFHSRSTRAKRMLKALPSREAPASEVPETAREEVVRDFVQLRRELVEEGMFRPSPLHMAYRVAELVVMHAVGIALLLNGWWAAAIVVLGIAQGRCGWFMHEAGHYSMTGIPSVDRRIQELAYGLGCGMSAAFWRNQPNKHHAPPQPLGRD 546 G +YDV F RRHPGG II + G DATQA+ EFH RS RA R+LK L SR A + T + +V DFV+LR +L +EG F+P+ H+AYR AE+V MH +G+ L+ GW+A +++LG+ +GRCGW MHE GH S+TG D +Q L YGLGCGMSAA+WRNQ NKHHA PQ L D Sbjct: 11 GNWYDVETFARRHPGGRIINFYRGKDATQAYREFHQRSKRADRILKTLKSRPAVKGDST-TDNDALVADFVKLRADLEKEGFFKPNYAHVAYRFAEIVGMHLLGLYLIFQGWYATGLIILGVVEGRCGWLMHEGGHNSLTGYIPFDHALQILTYGLGCGMSAAWWRNQHNKHHAMPQKLDHD 191
BLAST of mRNA_M-pyrifera_M_contig97991.22564.1 vs. uniprot
Match: R1CUH5_EMIHU (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CUH5_EMIHU) HSP 1 Score: 209 bits (532), Expect = 9.890e-63 Identity = 102/182 (56.04%), Postives = 128/182 (70.33%), Query Frame = 1 Query: 1 GRFYDVTGFMRRHPGGSIIKYGVGTDATQAFNEFHSRSTRAKRMLKALPSREAPASEVPETAREEVVRDFVQLRRELVEEGMFRPSPLHMAYRVAELVVMHAVGIALLLNGWWAAAIVVLGIAQGRCGWFMHEAGHYSMTGIPSVDRRIQELAYGLGCGMSAAFWRNQPNKHHAPPQPLGRD 546 GR YDV+ F++RHPGGSIIK +G+DAT A+N FH RS +A +ML+ALPSR P ++ AR+ + DF LR +L EG F P+ H+AYRVAE+V M+ GI L+ G+W +V GIAQGRCGW HE GHYS+TG +DR +Q + YGLGCGMS +WRNQ NKHHA PQ LG D Sbjct: 49 GRVYDVSDFIKRHPGGSIIKLSLGSDATDAYNNFHIRSKKADKMLRALPSR--PVADG--FARDALSADFEALRAQLEAEGYFEPNLWHVAYRVAEVVAMYWAGIRLIWAGYWFLGAIVAGIAQGRCGWLQHEGGHYSLTGNIKLDRHMQMIIYGLGCGMSGCYWRNQHNKHHATPQKLGAD 226 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97991.22564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97991.22564.1 >prot_M-pyrifera_M_contig97991.22564.1 ID=prot_M-pyrifera_M_contig97991.22564.1|Name=mRNA_M-pyrifera_M_contig97991.22564.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp MRRHPGGSIIKYGVGTDATQAFNEFHSRSTRAKRMLKALPSREAPASEVPback to top mRNA from alignment at M-pyrifera_M_contig97991:2..614- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97991.22564.1 ID=mRNA_M-pyrifera_M_contig97991.22564.1|Name=mRNA_M-pyrifera_M_contig97991.22564.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=613bp|location=Sequence derived from alignment at M-pyrifera_M_contig97991:2..614- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97991:2..614- >mRNA_M-pyrifera_M_contig97991.22564.1 ID=mRNA_M-pyrifera_M_contig97991.22564.1|Name=mRNA_M-pyrifera_M_contig97991.22564.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1038bp|location=Sequence derived from alignment at M-pyrifera_M_contig97991:2..614- (Macrocystis pyrifera P11B4 male)back to top |