mRNA_M-pyrifera_M_contig9794.22557.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9794.22557.1
Unique NamemRNA_M-pyrifera_M_contig9794.22557.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig9794.22557.1 vs. uniprot
Match: D7FQI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI3_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 1.440e-19
Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 1
Query:    7 NGPGTCDYPCGGNPSETCGGFFAFNAYEYTSATMVD------LGCYMDSKEARIMSLATTSLPMTPEVCADACSTTI--YFGVQWGVECWCS-------DTDSFKAIGEGDNCDYPCAGDASLNCGGYDAMRVYE 366
            +G G+CDY C G+   TCGG+ AF+ ++    ++        LGC+ D K  R++    ++  MT E C + C+     +F +QWG ECWC        D D +   G     DYPC GD S  CGGYD+  +Y 
Sbjct:  242 HGEGSCDYTCTGDSGTTCGGYDAFDLFKLEEDSLSPPSEDYYLGCFADDKGDRVLEDKISASDMTLETCEEHCTALDKPFFALQWGKECWCGGCELQDDDLDRYDRHGIASCTDYPCTGDGSRQCGGYDSFSLYN 376          
BLAST of mRNA_M-pyrifera_M_contig9794.22557.1 vs. uniprot
Match: D8LQX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX7_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.290e-18
Identity = 48/130 (36.92%), Postives = 68/130 (52.31%), Query Frame = 1
Query:    7 NGPGTCDYPCGGNPSETCGGFFAFNAYEYTSATMVD---LGCYMDSKEARIMSLATTSLPMTPEVCADACSTTI--YFGVQWGVECWCSDTD------SFKAIGEGDNCDYPCAGDASLNCGGYDAMRVY 363
            +G GTCD  C G+   TCGGF AF+ +E    +  +    GC+ D K  R++    +S  M+ ++C D C+     +F +QWG ECWC   D       F   G     D+PC G+AS +CG YDA  +Y
Sbjct:  141 HGDGTCDMACTGDAGTTCGGFDAFDLFELGPLSPSEDHYFGCFADDKSDRVLGDKMSSGDMSLQLCEDYCTAMDKPFFALQWGRECWCGGCDLLDEGHRFDRHGTASCTDHPCTGEASRDCGAYDAFSLY 270          
BLAST of mRNA_M-pyrifera_M_contig9794.22557.1 vs. uniprot
Match: A0A8H6VSZ0_9AGAR (Putative fungistatic metabolite n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6VSZ0_9AGAR)

HSP 1 Score: 81.3 bits (199), Expect = 2.180e-15
Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = 1
Query:   22 CDYPCGGNPSETCGGFFAFNAYEYTSATMVDLG-------CYMDSKEARIMSLATTSLPMTPEVCADACSTTIY--FGVQWGVECWCSDTDSFKAIG-EGDNCDYPCAGDASLNCGGYDAMRVYE 366
            CD PC GNP + CG  F  + Y  +++    L        C +D+    ++   TT   +TP  C + C++  Y   GV+ G EC+CS++ +   IG   D C+ PCAGD+SLNCGG   + VY+
Sbjct:  468 CDKPCAGNPQQICGAGFRISLYSKSTSNAAALPAGWSPSMCAIDNDSRVLVGFQTTDTALTPSSCINKCASMNYNLAGVENGQECYCSNSLTNNPIGAREDQCNIPCAGDSSLNCGGGWRVMVYQ 592          
BLAST of mRNA_M-pyrifera_M_contig9794.22557.1 vs. uniprot
Match: A0A6H5JQ44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ44_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 6.380e-14
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 1
Query:  112 DLGCYMDSKEARIMSLATTSLP-MTPEVCADAC---STTIYFGVQWGVECWC----SDTDSFKAIGEGDNCDYPCAGDASLNCGGYDAMRVYE 366
            DLGCY DS+  R++         MTP+VCA  C    +  ++GVQ+G ECWC    ++ D   A+ E   CDYPC GDAS  CGG+D+ + +E
Sbjct:   52 DLGCYRDSQSDRVLQSGLMGQSDMTPDVCAAYCLDKGSYTFYGVQYGQECWCGRAGTEYDRLGAL-EMSECDYPCTGDASSTCGGFDSFQAFE 143          
BLAST of mRNA_M-pyrifera_M_contig9794.22557.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 8.960e-14
Identity = 43/106 (40.57%), Postives = 57/106 (53.77%), Query Frame = 1
Query:   67 FFAFNAYEYTSATMVDLGCYMDSKEARIM-SLATTSLPMTPEVCADACST--TIYFGVQWGVECWCSDTDSFKAIGEGDN---CDYPCAGDASLNCGGYDAMRVYE 366
            +F+     Y +     LGCY+D +  R++ S  T S  MTP VC   C    +  FG+Q+G ECWC D  SF    E D+   CDY CAGD ++ CGGY  + VY 
Sbjct:  897 YFSGGEPSYDATVGSHLGCYLDVRNDRLLRSDMTESEDMTPAVCGAFCGEGGSEVFGLQYGTECWCGDLASFSGAVEADDEALCDYECAGDDTVRCGGYLYVDVYR 1002          
BLAST of mRNA_M-pyrifera_M_contig9794.22557.1 vs. uniprot
Match: A0A6G1FQC9_9PEZI (WSC domain-containing protein 2 (Fragment) n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1FQC9_9PEZI)

HSP 1 Score: 72.8 bits (177), Expect = 1.940e-12
Identity = 42/125 (33.60%), Postives = 64/125 (51.20%), Query Frame = 1
Query:   22 CDYPCGGNPSETCGGFFAFNAY---EYTSATMVDL------GCYMDSKEARIMSLATTSLPMTPEVCADACSTTIYFGVQWGVECWCSDTDSFKAIGEGD-NCDYPCAGDASLNCGGYDAMRVYE 366
            C+ PCGG+PSE CGG    + Y   EY      D+      GC+ DS    +   AT    MT   CA  C  + YFGV++  EC+C  T S +++ + + +C+  CAG+ +  CG  +   +Y+
Sbjct:  595 CNMPCGGDPSEICGGSNRLSVYKNEEYAPMINPDVAGYSYEGCWTDSPTRYLSGSATAGDSMTVPSCAGFCDGSNYFGVEYSRECYCGSTLSAESVKQPETDCNIACAGNGTTWCGAGNRFNLYK 719          
BLAST of mRNA_M-pyrifera_M_contig9794.22557.1 vs. uniprot
Match: A0A8H8BTU4_9HELO (Uncharacterized protein n=1 Tax=Cadophora malorum TaxID=108018 RepID=A0A8H8BTU4_9HELO)

HSP 1 Score: 72.4 bits (176), Expect = 2.610e-12
Identity = 46/129 (35.66%), Postives = 66/129 (51.16%), Query Frame = 1
Query:   22 CDYPCGGNPSETCGGFFAFNAYEYTSATMVD----------LGCYMDSKEARIMSLATTSLPMTPEVCADACSTT--IYFGVQWGVECWCSDTDSFKAIGEGDNCDYPCAGDASLNCGGYDAMRVYENT 372
            C  PC G PS+ CGG  A   Y+ T++T V           L  Y+DS +AR++S+       T + C  ACS     Y GV++G +C+C  T S  A G G   +  C G++S  CGG + ++VY  T
Sbjct:  423 CLLPCTGTPSQNCGGINAIGVYQGTASTAVTIPPQAGGYTYLDSYIDSAQARLLSVQQNLASNTVDNCNRACSNGGYTYAGVEFGSQCFCGSTLSGSATG-GQTPNMICTGNSSQFCGGNNMLQVYMGT 550          
BLAST of mRNA_M-pyrifera_M_contig9794.22557.1 vs. uniprot
Match: A0A166Z0T9_METRR (Trans-sialidase n=1 Tax=Metarhizium rileyi (strain RCEF 4871) TaxID=1081105 RepID=A0A166Z0T9_METRR)

HSP 1 Score: 72.4 bits (176), Expect = 2.780e-12
Identity = 47/133 (35.34%), Postives = 70/133 (52.63%), Query Frame = 1
Query:   19 TCDYPCGGNPSETCGGFFAFNAYE---YTSA---TMVD----LGCYMD-SKEARIM--SLATTSLPMTPEVCADACSTT--IYFGVQWGVECWCSD--TDSFKAIGEGDNCDYPCAGDASLNCGGYDAMRVYE 366
            +C++PC G+ SETCGG    + +E   Y S      VD    +GCY D + + R +  S+   S  +TP  C  AC +    Y G ++G ECWC      + K + +   C+ PC+G+AS +CGG   + VYE
Sbjct:  100 SCNFPCSGDKSETCGGDSTLSVWEDSTYPSKPEEVSVDDYETIGCYTDDTNQGRTLPWSVYVDSASLTPASCIAACKSKGFPYAGTEYGGECWCGSFLNPATKRV-DSSQCNVPCSGEASASCGGAGRLTVYE 231          
BLAST of mRNA_M-pyrifera_M_contig9794.22557.1 vs. uniprot
Match: A0A1S7UM18_ROSNE (Putative WSC domain-containing protein n=1 Tax=Rosellinia necatrix TaxID=77044 RepID=A0A1S7UM18_ROSNE)

HSP 1 Score: 71.2 bits (173), Expect = 6.910e-12
Identity = 49/135 (36.30%), Postives = 67/135 (49.63%), Query Frame = 1
Query:   22 CDYPCGGNPSETCGGFFAFNAYEYTSATM-----VDLGCYM----DSKEARIMSLATTSL---PMTPEVCADACSTTIYFGVQWGVECWCSDTDSFKAIGEGD------NCDYPCAGDASLNCGGYDAMRVYENT 372
            C  PC G+PSE CG     N Y Y++ T      + +G Y      ++ A + +LA  SL    MT + CA  C  ++YFG ++GVEC+C D       GEG        C+  C GDA+  CG  D + VYE T
Sbjct:  881 CSVPCAGDPSEYCGAGNRLNLY-YSNTTAGPSQPLVVGNYSWFGCQTEGAGVRALAAKSLVDAEMTLDACAAFCEGSVYFGAEYGVECYCGDE-----FGEGSVAAPTGQCNVACGGDATQLCGAGDRLSVYELT 1009          
BLAST of mRNA_M-pyrifera_M_contig9794.22557.1 vs. uniprot
Match: A0A4U0WZW7_9PEZI (Uncharacterized protein (Fragment) n=1 Tax=Cryomyces minteri TaxID=331657 RepID=A0A4U0WZW7_9PEZI)

HSP 1 Score: 71.2 bits (173), Expect = 6.970e-12
Identity = 43/142 (30.28%), Postives = 64/142 (45.07%), Query Frame = 1
Query:   22 CDYPCGGNPSETCGGFFAFNAYEYTSATMVD---------------------------LGCYMDSKEARIMSLATTS-LPMTPEVCADACSTTIYFGVQWGVECWCSDTDSFKAIGEGDNCDYPCAGDASLNCGGYDAMRVY 363
            C   CG N SE CGG    N Y+   +  V                            LGCY DS ++R +S+   +   +T + CA ACST +YFG+++  EC+C ++    +    D C   C GD+S  CGG + + +Y
Sbjct:  798 CSMTCGANSSEYCGGPNRLNMYQLNGSAPVTTTSGVTTAPTANPSGPATVQSAGLFHYLGCYNDSVQSRALSVEPIAGNTLTVQNCASACSTYLYFGIEYATECYCGNSLLSYSQPMADGCSMTCGGDSSSLCGGPNRLTMY 939          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9794.22557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQI3_ECTSI1.440e-1935.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LQX7_ECTSI2.290e-1836.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8H6VSZ0_9AGAR2.180e-1536.00Putative fungistatic metabolite n=1 Tax=Mycena ind... [more]
A0A6H5JQ44_9PHAE6.380e-1443.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJP1_ECTSI8.960e-1440.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6G1FQC9_9PEZI1.940e-1233.60WSC domain-containing protein 2 (Fragment) n=1 Tax... [more]
A0A8H8BTU4_9HELO2.610e-1235.66Uncharacterized protein n=1 Tax=Cadophora malorum ... [more]
A0A166Z0T9_METRR2.780e-1235.34Trans-sialidase n=1 Tax=Metarhizium rileyi (strain... [more]
A0A1S7UM18_ROSNE6.910e-1236.30Putative WSC domain-containing protein n=1 Tax=Ros... [more]
A0A4U0WZW7_9PEZI6.970e-1230.28Uncharacterized protein (Fragment) n=1 Tax=Cryomyc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9794contigM-pyrifera_M_contig9794:5075..6503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score113.2
Seed ortholog evalue8.7e-23
Seed eggNOG ortholog2880.D8LEL0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size379
Cds size378
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9794.22557.1prot_M-pyrifera_M_contig9794.22557.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9794 5075..6503 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816896.820644-CDS-M-pyrifera_M_contig9794:5074..52061622816896.820644-CDS-M-pyrifera_M_contig9794:5074..5206Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9794 5075..5206 -
1692278242.704986-CDS-M-pyrifera_M_contig9794:5074..52061692278242.704986-CDS-M-pyrifera_M_contig9794:5074..5206Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9794 5075..5206 -
1622816896.8333037-CDS-M-pyrifera_M_contig9794:5587..56441622816896.8333037-CDS-M-pyrifera_M_contig9794:5587..5644Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9794 5588..5644 -
1692278242.718614-CDS-M-pyrifera_M_contig9794:5587..56441692278242.718614-CDS-M-pyrifera_M_contig9794:5587..5644Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9794 5588..5644 -
1622816896.843707-CDS-M-pyrifera_M_contig9794:6314..65031622816896.843707-CDS-M-pyrifera_M_contig9794:6314..6503Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9794 6315..6503 -
1692278242.7320747-CDS-M-pyrifera_M_contig9794:6314..65031692278242.7320747-CDS-M-pyrifera_M_contig9794:6314..6503Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9794 6315..6503 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9794.22557.1

>prot_M-pyrifera_M_contig9794.22557.1 ID=prot_M-pyrifera_M_contig9794.22557.1|Name=mRNA_M-pyrifera_M_contig9794.22557.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp
EVNGPGTCDYPCGGNPSETCGGFFAFNAYEYTSATMVDLGCYMDSKEARI
MSLATTSLPMTPEVCADACSTTIYFGVQWGVECWCSDTDSFKAIGEGDNC
DYPCAGDASLNCGGYDAMRVYENTG*
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mRNA from alignment at M-pyrifera_M_contig9794:5075..6503-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9794.22557.1 ID=mRNA_M-pyrifera_M_contig9794.22557.1|Name=mRNA_M-pyrifera_M_contig9794.22557.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1429bp|location=Sequence derived from alignment at M-pyrifera_M_contig9794:5075..6503- (Macrocystis pyrifera P11B4 male)
GAGGTCAACGGGCCTGGTACTTGCGACTACCCTTGTGGCGGCAACCCCAG CGAGACTTGTGGTGGATTTTTCGCCTTCAACGCGTACGAGTACACCAGTG CAACCATGGTCGATTTGGGCTGCTATATGGACTCGAAGGAAGCCCGTATC ATGTCACTTGCAACAACGAGCCTTCCAATGACCCCCGAGGTATGATCTTA CCGTTTTTTGTATTTTGTCGGCCGTTGATGTAGTCGAGATGGCCAGGCGA TGTGCTTGAATGTGTGCACGGTGGTTCGTTTGTTTTGTGATGTTGGTGGC AAGGTCGACTCACGGGGTTTTGCCTTTGTTGAGTTTTTTTTTTTTTGTTC CGTTTCGCCGAAGCCCATCGGTTGGTCTTGCCGTTCAGGTTGACCGCTTT TTTCGACATTCCCGTTCATTTTGTTTGGGCTGTGCATCATTTACGCGTGT AATTGTTCAAGCTAACGCACGCTGGCAACAAGAAGAAGCGTGTGGACGGG GTATTGTTTTCATTGGGGTCCTGCGACAAAGTGCGCTGGTATGTCATGGA AATGGAGTTGGAGCACTATTCATAGTAGACTGCACCCGGTTCCTGACACT ACTCATATAGCATGCGAGCCAGGGTCCGCGAGTGCCGGTGTGGTTTGCTT GCGTTACATCCCTTTGGCACGATTGCGTTTATCCGCCCCTCGCGCTGCTT CTACTGATGTTGTGGACGGAGCCATAACGCGGCACACTCCTGCCGCGGTT CTCCCCCGCTCCCGCTCTCTCTTCAAGTCTAACCTTCTTCTATTCCTCCC CCTCGTCTCGTTTGTTTCTGGTCTTCCGTATCTGTCCGCGCACTTTATCG CGGTGGCAGGTTTGCGCCGACGCCTGTTCGACGACGATTTACTTCGGCGT GCAATGGGGAGTGGAGGTGAGGACGAAGATGCAACCGAAATGTACTGACA CAGTAGTTGTGTGGACAAAGAACACGACTCTGGCCGTAGTCGTTTATTTA ATGGCCGCGGGGCTATTTGAATTATTACAATTGAACTACTGTAATGTGGT GATGCTAACAACGACTATACGTACGTATTGCCAGCGTATTTCGTTTGTCA ATTCCACCGCACACGCGTACTCCGGCTTTTGACCGACAACGTTTTGTTTT TTCGCCTCATTAAAAGTGACAGAAACTCTGTAAAGCGCGTGCGTTACCCC GAGACACCCCTACCCACTGCCTTGTCTTGATTGAACCCCTCCTGGACCCT CCCACGTTTGACCCACCCATGGTTTGCTCTCGCCCCGGCTTGCGCAGTGC TGGTGCTCGGACACTGACTCTTTCAAGGCCATCGGGGAGGGTGACAACTG CGACTATCCCTGCGCCGGTGACGCTTCGCTGAACTGTGGCGGCTACGACG CAATGCGCGTGTATGAGAACACGGGCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig9794:5075..6503-

>mRNA_M-pyrifera_M_contig9794.22557.1 ID=mRNA_M-pyrifera_M_contig9794.22557.1|Name=mRNA_M-pyrifera_M_contig9794.22557.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig9794:5075..6503- (Macrocystis pyrifera P11B4 male)
GAGGTCAACGGGCCTGGTACTTGCGACTACCCTTGTGGCGGCAACCCCAG
CGAGACTTGTGGTGGATTTTTCGCCTTCAACGCGTACGAGTACACCAGTG
CAACCATGGTCGATTTGGGCTGCTATATGGACTCGAAGGAAGCCCGTATC
ATGTCACTTGCAACAACGAGCCTTCCAATGACCCCCGAGGAGGTCAACGG
GCCTGGTACTTGCGACTACCCTTGTGGCGGCAACCCCAGCGAGACTTGTG
GTGGATTTTTCGCCTTCAACGCGTACGAGTACACCAGTGCAACCATGGTC
GATTTGGGCTGCTATATGGACTCGAAGGAAGCCCGTATCATGTCACTTGC
AACAACGAGCCTTCCAATGACCCCCGAGGTTTGCGCCGACGCCTGTTCGA
CGACGATTTACTTCGGCGTGCAATGGGGAGTGGAGGTTTGCGCCGACGCC
TGTTCGACGACGATTTACTTCGGCGTGCAATGGGGAGTGGAGTGCTGGTG
CTCGGACACTGACTCTTTCAAGGCCATCGGGGAGGGTGACAACTGCGACT
ATCCCTGCGCCGGTGACGCTTCGCTGAACTGTGGCGGCTACGACGCAATG
CGCGTGTATGAGAACACGGGCTAATGCTGGTGCTCGGACACTGACTCTTT
CAAGGCCATCGGGGAGGGTGACAACTGCGACTATCCCTGCGCCGGTGACG
CTTCGCTGAACTGTGGCGGCTACGACGCAATGCGCGTGTATGAGAACACG
GGCTAA
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