mRNA_M-pyrifera_M_contig97935.22556.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97935.22556.1
Unique NamemRNA_M-pyrifera_M_contig97935.22556.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97935.22556.1 vs. uniprot
Match: A0A2E7KBE8_9PLAN (Hydrolase_4 domain-containing protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KBE8_9PLAN)

HSP 1 Score: 281 bits (720), Expect = 7.030e-93
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 1
Query:    1 RWGERFLPRLFIQLVPTWEVTRAFRIMVWFTQRRQGCRFVNLKPLLRNLENRKLLFFVGEKDQSVVPCMSDQIIGRIHHSDTTLCSLPGAVHNAGRFAQQELYDQRLVEFFTQMVETQEKAASDAADPGVKSESALVSHQ 420
            RWGERFLPRLFIQLVPTWEVTRAFRIMVWFTQRRQGCRFVNLKPLLRNLENRKLLFFVGEKDQSVVPCMSDQIIGRIHHS+TTLCSLPGAVHNAGRFAQQELYDQRLVEFFTQMVETQEKAASDAADPGVKSESALVSHQ
Sbjct:  223 RWGERFLPRLFIQLVPTWEVTRAFRIMVWFTQRRQGCRFVNLKPLLRNLENRKLLFFVGEKDQSVVPCMSDQIIGRIHHSETTLCSLPGAVHNAGRFAQQELYDQRLVEFFTQMVETQEKAASDAADPGVKSESALVSHQ 362          
BLAST of mRNA_M-pyrifera_M_contig97935.22556.1 vs. uniprot
Match: A0A518FXR3_9PLAN (Esterase n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FXR3_9PLAN)

HSP 1 Score: 216 bits (549), Expect = 2.970e-67
Identity = 107/140 (76.43%), Postives = 120/140 (85.71%), Query Frame = 1
Query:    1 RWGERFLPRLFIQLVPTWEVTRAFRIMVWFTQRRQGCRFVNLKPLLRNLENRKLLFFVGEKDQSVVPCMSDQIIGRIHHSDTTLCSLPGAVHNAGRFAQQELYDQRLVEFFTQMVETQEKAASDAADPGVKSESALVSHQ 420
            RWGERFLPRLFIQLVPTWEVTRAFRIM+WF+QRRQGCRFVNLKPLL +L+NR+LLFFVGE DQSVVP M+D II RI HS  TLC LP AVHNAGRFAQQ+LYDQRL+EFF+QM ++ ++A S A D    SES LVSHQ
Sbjct:  204 RWGERFLPRLFIQLVPTWEVTRAFRIMIWFSQRRQGCRFVNLKPLLHSLKNRQLLFFVGENDQSVVPRMTDLIIRRIQHSKMTLCQLPEAVHNAGRFAQQKLYDQRLIEFFSQMSDSHDQADSSATDKEPVSESELVSHQ 343          
BLAST of mRNA_M-pyrifera_M_contig97935.22556.1 vs. uniprot
Match: A0A517VLN0_9PLAN (Esterase n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VLN0_9PLAN)

HSP 1 Score: 176 bits (447), Expect = 7.240e-52
Identity = 80/116 (68.97%), Postives = 101/116 (87.07%), Query Frame = 1
Query:    1 RWGERFLPRLFIQLVPTWEVTRAFRIMVWFTQRRQGCRFVNLKPLLRNLENRKLLFFVGEKDQSVVPCMSDQIIGRIHHSDTTLCSLPGAVHNAGRFAQQELYDQRLVEFFTQMVE 348
            RWGERFLPRLFIQ+VPT EV RAFRIM+W++QRRQGCR++NLKP +++L+NR LLFF GEKDQSVVP M+  I+ RIH++  T+CSLPGA+HNAGRFAQ E +D  L++FF+QM+E
Sbjct:  204 RWGERFLPRLFIQIVPTSEVIRAFRIMIWYSQRRQGCRYINLKPRVKDLKNRNLLFFTGEKDQSVVPRMTQLIVKRIHNTHITVCSLPGAIHNAGRFAQLEKFDAALIDFFSQMIE 319          
BLAST of mRNA_M-pyrifera_M_contig97935.22556.1 vs. uniprot
Match: A0A2E2BVW1_9PLAN (Hydrolase_4 domain-containing protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BVW1_9PLAN)

HSP 1 Score: 170 bits (431), Expect = 1.480e-49
Identity = 80/117 (68.38%), Postives = 98/117 (83.76%), Query Frame = 1
Query:    1 RWGERFLPRLFIQLVPTWEVTRAFRIMVWFTQRRQGCRFVNLKPLLRNLENRKLLFFVGEKDQSVVPCMSDQIIGRIHHSDTTLCSLPGAVHNAGRFAQQELYDQRLVEFFTQMVET 351
            RWGERFLPRLFIQ+VPT EV RAFRIM+W++QRRQGCR++NLK  L+ L+ R LLFF GEKDQSVVP M+D I+ RI ++  T+CSLPGA+HNAGRFAQ E +D   ++FF+QMVET
Sbjct:  196 RWGERFLPRLFIQIVPTSEVIRAFRIMIWYSQRRQGCRYINLKSRLKALKQRNLLFFTGEKDQSVVPRMTDLIVKRIRNAHITVCSLPGAIHNAGRFAQLERFDSAALDFFSQMVET 312          
BLAST of mRNA_M-pyrifera_M_contig97935.22556.1 vs. uniprot
Match: A6C1L2_9PLAN (Hydrolase_4 domain-containing protein n=7 Tax=Planctomycetaceae TaxID=126 RepID=A6C1L2_9PLAN)

HSP 1 Score: 168 bits (426), Expect = 5.850e-49
Identity = 78/117 (66.67%), Postives = 98/117 (83.76%), Query Frame = 1
Query:    1 RWGERFLPRLFIQLVPTWEVTRAFRIMVWFTQRRQGCRFVNLKPLLRNLENRKLLFFVGEKDQSVVPCMSDQIIGRIHHSDTTLCSLPGAVHNAGRFAQQELYDQRLVEFFTQMVET 351
            RWGERFLP LFIQ+VPT EV RAFRIM+W++QRRQGCR++NLKP ++ L+NR LLFF GEKDQSVVP M+  I+ RI  +  T+CSLPGA+HNAGRFAQ E +D  L++FF++MVE+
Sbjct:  182 RWGERFLPPLFIQIVPTSEVIRAFRIMIWYSQRRQGCRYINLKPRVKGLKNRNLLFFTGEKDQSVVPRMTQLIVKRIPDAHITVCSLPGAIHNAGRFAQLEKFDSTLIDFFSRMVES 298          
BLAST of mRNA_M-pyrifera_M_contig97935.22556.1 vs. uniprot
Match: A0A518IK56_9PLAN (Esterase n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IK56_9PLAN)

HSP 1 Score: 162 bits (409), Expect = 4.920e-46
Identity = 76/114 (66.67%), Postives = 93/114 (81.58%), Query Frame = 1
Query:    1 RWGERFLPRLFIQLVPTWEVTRAFRIMVWFTQRRQGCRFVNLKPLLRNLENRKLLFFVGEKDQSVVPCMSDQIIGRIHHSDTTLCSLPGAVHNAGRFAQQELYDQRLVEFFTQM 342
            RWGERFLPRLFIQLVPT EV RAFRIM+W++QRRQGCR++NLK  L +L+ R+LLF VGEKDQSV+P MS+ I+ +I HS T +C LP A+HNAGRF Q + +D  LV+FF QM
Sbjct:  204 RWGERFLPRLFIQLVPTAEVIRAFRIMIWYSQRRQGCRYLNLKSYLSSLKKRELLFLVGEKDQSVIPRMSELIVQKIRHSKTKVCLLPNAIHNAGRFTQPKQFDASLVDFFLQM 317          
BLAST of mRNA_M-pyrifera_M_contig97935.22556.1 vs. uniprot
Match: A0A517WP24_9PLAN (Esterase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WP24_9PLAN)

HSP 1 Score: 160 bits (404), Expect = 2.120e-45
Identity = 79/138 (57.25%), Postives = 101/138 (73.19%), Query Frame = 1
Query:    1 RWGERFLPRLFIQLVPTWEVTRAFRIMVWFTQRRQGCRFVNLKPLLRNLENRKLLFFVGEKDQSVVPCMSDQIIGRIHHSDTTLCSLPGAVHNAGRFAQQELYDQRLVEFFTQMVETQEKAASDAADPGVKSESALVS 414
            RWGERF+PR FIQLVPTWEV  AFRIM+W++Q+RQGC++VNLKP L +L +R LLF VGEKDQSVVP M++ I  +IH S  T+CS+P A+HNAGR AQ + YD  L+ FF+QM        +  ++   K+E  LVS
Sbjct:  204 RWGERFVPRWFIQLVPTWEVVFAFRIMLWYSQKRQGCQYVNLKPYLSSLRDRDLLFLVGEKDQSVVPRMTELITRKIHDSRITVCSVPDAIHNAGRNAQPQQYDSALLHFFSQMSVGDSPQPASNSEKQTKTEPELVS 341          
BLAST of mRNA_M-pyrifera_M_contig97935.22556.1 vs. uniprot
Match: A0A517RN94_9PLAN (Esterase n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RN94_9PLAN)

HSP 1 Score: 156 bits (394), Expect = 5.610e-44
Identity = 75/133 (56.39%), Postives = 100/133 (75.19%), Query Frame = 1
Query:    1 RWGERFLPRLFIQLVPTWEVTRAFRIMVWFTQRRQGCRFVNLKPLLRNLENRKLLFFVGEKDQSVVPCMSDQIIGRIHHSDTTLCSLPGAVHNAGRFAQQELYDQRLVEFFTQMV-----ETQEKAASDAADP 384
            RWGERFLPRLFIQLVPT EV RAFR+M+W++QRRQGCR++NLK  LR+L+ R+LLF VGE D+SVVP M++ I+ +I  S+  +C LP A+HNAGRF Q + +D  L++FF+QM      +T+ +  SD   P
Sbjct:  204 RWGERFLPRLFIQLVPTSEVIRAFRLMIWYSQRRQGCRYINLKSYLRSLKTRELLFLVGENDRSVVPRMTELIVQKIQSSNARVCLLPKAIHNAGRFTQPDQFDAALIDFFSQMPLKLSQQTESEFRSDPVSP 336          
BLAST of mRNA_M-pyrifera_M_contig97935.22556.1 vs. uniprot
Match: A0A518CGR1_9PLAN (Alpha/beta hydrolase family protein n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CGR1_9PLAN)

HSP 1 Score: 68.2 bits (165), Expect = 9.240e-11
Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = 1
Query:    1 RWGERFLPRLFIQLVPTWEVTRAFRIMVWFTQRRQGCRFVNLKPLLRNLENRKLLFFVGEKDQSVVPCMSDQII----GRIHHSDTTLCSLPGAVHNAGRFAQQELYDQRLVEFFTQMVETQEKAASDAADPGVK 393
            RW   + P   I  +P   +  +  I+ W +Q R GC ++ L+ LLR L+ + ++   G KD  V   +  +I+    G+ +H    L  +P A HN GR    E YDQ+LVE+F+Q + ++    + A +P V+
Sbjct:  202 RWATLYFPPWIIDRLPDLHMRISLTIVRWISQWRHGCHYLVLEKLLRRLKKKPVMMMNGTKDSYVHMDIPHKILKRAGGQPYHQ---LWEIPNAKHNLGRETIPEEYDQKLVEYFSQTLNSE----ASAVEPSVR 329          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97935.22556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2E7KBE8_9PLAN7.030e-9399.29Hydrolase_4 domain-containing protein n=8 Tax=Gime... [more]
A0A518FXR3_9PLAN2.970e-6776.43Esterase n=2 Tax=Gimesia panareensis TaxID=2527978... [more]
A0A517VLN0_9PLAN7.240e-5268.97Esterase n=1 Tax=Gimesia algae TaxID=2527971 RepID... [more]
A0A2E2BVW1_9PLAN1.480e-4968.38Hydrolase_4 domain-containing protein n=3 Tax=Plan... [more]
A6C1L2_9PLAN5.850e-4966.67Hydrolase_4 domain-containing protein n=7 Tax=Plan... [more]
A0A518IK56_9PLAN4.920e-4666.67Esterase n=1 Tax=Gimesia fumaroli TaxID=2527976 Re... [more]
A0A517WP24_9PLAN2.120e-4557.25Esterase n=2 Tax=Gimesia aquarii TaxID=2527964 Rep... [more]
A0A517RN94_9PLAN5.610e-4456.39Esterase n=1 Tax=Gimesia alba TaxID=2527973 RepID=... [more]
A0A518CGR1_9PLAN9.240e-1131.11Alpha/beta hydrolase family protein n=1 Tax=Polyst... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97935contigM-pyrifera_M_contig97935:281..703 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score172.6
Seed ortholog evalue1.3e-40
Seed eggNOG ortholog344747.PM8797T_12823
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Alpha/beta hydrolase family
EggNOG OGs2IZGG@203682,COG1073@1,COG1073@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size423
Cds size423
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816896.7848313-CDS-M-pyrifera_M_contig97935:280..7031622816896.7848313-CDS-M-pyrifera_M_contig97935:280..703Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97935 281..703 -
1692278242.6881464-CDS-M-pyrifera_M_contig97935:280..7031692278242.6881464-CDS-M-pyrifera_M_contig97935:280..703Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97935 281..703 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97935.22556.1prot_M-pyrifera_M_contig97935.22556.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97935 281..703 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97935.22556.1

>prot_M-pyrifera_M_contig97935.22556.1 ID=prot_M-pyrifera_M_contig97935.22556.1|Name=mRNA_M-pyrifera_M_contig97935.22556.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp
RWGERFLPRLFIQLVPTWEVTRAFRIMVWFTQRRQGCRFVNLKPLLRNLE
NRKLLFFVGEKDQSVVPCMSDQIIGRIHHSDTTLCSLPGAVHNAGRFAQQ
ELYDQRLVEFFTQMVETQEKAASDAADPGVKSESALVSHQ*
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mRNA from alignment at M-pyrifera_M_contig97935:281..703-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97935.22556.1 ID=mRNA_M-pyrifera_M_contig97935.22556.1|Name=mRNA_M-pyrifera_M_contig97935.22556.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=423bp|location=Sequence derived from alignment at M-pyrifera_M_contig97935:281..703- (Macrocystis pyrifera P11B4 male)
CGCTGGGGCGAACGTTTTCTACCACGCCTGTTCATTCAGCTGGTCCCAAC GTGGGAGGTGACCCGGGCATTTCGCATTATGGTCTGGTTCACTCAACGGC GTCAGGGGTGTCGCTTCGTAAATCTCAAGCCCCTGCTCCGCAACCTGGAA AACAGAAAACTGCTGTTCTTCGTCGGAGAGAAAGATCAGAGTGTCGTGCC CTGCATGTCAGATCAGATCATCGGCCGCATCCATCACTCTGATACCACGC TATGCTCACTCCCAGGGGCGGTGCATAATGCCGGTCGTTTCGCTCAACAG GAACTTTACGATCAACGGCTCGTTGAGTTCTTCACACAGATGGTCGAGAC GCAAGAGAAAGCTGCCTCTGACGCTGCTGATCCTGGTGTGAAATCTGAAT CTGCACTCGTCTCACACCAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97935:281..703-

>mRNA_M-pyrifera_M_contig97935.22556.1 ID=mRNA_M-pyrifera_M_contig97935.22556.1|Name=mRNA_M-pyrifera_M_contig97935.22556.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig97935:281..703- (Macrocystis pyrifera P11B4 male)
CGCTGGGGCGAACGTTTTCTACCACGCCTGTTCATTCAGCTGGTCCCAAC
GTGGGAGGTGACCCGGGCATTTCGCATTATGGTCTGGTTCACTCAACGGC
GTCAGGGGTGTCGCTTCGTAAATCTCAAGCCCCTGCTCCGCAACCTGGAA
AACAGAAAACTGCTGTTCTTCGTCGGAGAGAAAGATCAGAGTGTCGTGCC
CTGCATGTCAGATCAGATCATCGGCCGCATCCATCACTCTGATACCACGC
TATGCTCACTCCCAGGGGCGGTGCATAATGCCGGTCGTTTCGCTCAACAG
GAACTTTACGATCAACGGCTCGTTGAGTTCTTCACACAGATGGTCGAGAC
GCAAGAGAAAGCTGCCTCTGACGCTGCTGATCCTGGTGTGAAATCTGAAT
CTGCACTCGTCTCACACCAGTGACGCTGGGGCGAACGTTTTCTACCACGC
CTGTTCATTCAGCTGGTCCCAACGTGGGAGGTGACCCGGGCATTTCGCAT
TATGGTCTGGTTCACTCAACGGCGTCAGGGGTGTCGCTTCGTAAATCTCA
AGCCCCTGCTCCGCAACCTGGAAAACAGAAAACTGCTGTTCTTCGTCGGA
GAGAAAGATCAGAGTGTCGTGCCCTGCATGTCAGATCAGATCATCGGCCG
CATCCATCACTCTGATACCACGCTATGCTCACTCCCAGGGGCGGTGCATA
ATGCCGGTCGTTTCGCTCAACAGGAACTTTACGATCAACGGCTCGTTGAG
TTCTTCACACAGATGGTCGAGACGCAAGAGAAAGCTGCCTCTGACGCTGC
TGATCCTGGTGTGAAATCTGAATCTGCACTCGTCTCACACCAGTGA
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