mRNA_M-pyrifera_M_contig9793.22553.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9793.22553.1
Unique NamemRNA_M-pyrifera_M_contig9793.22553.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig9793.22553.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI)

HSP 1 Score: 625 bits (1612), Expect = 5.970e-205
Identity = 417/666 (62.61%), Postives = 475/666 (71.32%), Query Frame = 1
Query:    1 LPQEEHPWMREAVSDMGGSNNSGGEPAMGKVWCISERPVSLADNPDGARLRTLALTTRTPSQAE--VTRTSTASRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILQRAMKWHKSNLHEARPVAPSPPLVASPGGSAGFQGGLLATKVGEVVPLPELGTQLFSDRREVLCLTSAGMQTLMKLRPVDHLYDLLAHNQAERVSLFFDDFSPDQSAAMCFGIACGLPKDAGSGGGXXXX----TGSMSPPGRTRSSPSSYGVPSHTVRARALDAAVLNCKPPGFSSPQAVAGAG--------AGVALE--GVMMGEKFNNSALHNGLQLFLARLLRPVWFLSVITMSGGXXXXXXXXXXXXXXXXXXXXXXVPVVRDLEAMRAPLELLRASIRHAFPRAVSEDLAALAGKEARVAAAAPAEEAYANQGAALLSEAAKEWRGERALGEDGQLSRACAALTDLGRLGAVVDVCMTCAKNFEDDPRRATAXXXXXXXXXXXXLQAWEEGVYQGGGVVSSGDREKARLECYGRVLDTVVGLLKRKP----SAPVGLGGGGEGRRPEVDGLISRCLAYDSPRMHEMLFGLLEEHDKSLLLRIGTPSVERYLERDPTLLFGHYMLHKEYAKAVHLMDREARAEPSKGKHVRNRVDCLVKAISACHKCDLNSPQ 1938
            + QEEHP MREAV++MG S     + AMG+VW ISERPV+LADNP+  R+R L   +  PS ++             XXXXXXXXXXXX                 ++ RA  W +S+ + +RPVAPSPPLVASPGGSAGF GGL A  VG +V LPELG Q +SDRRE+LCLT AG+Q L +LRPVD LYDLLA N  E V LFF+DFSPDQSAAMCF IACGLP+D G+G GXXXX     GS        S P++ GVPSHTVRARALDAA++ CKPPGFSSP   AG G         GVA    GV+MGEKF NSALHNGLQLF+ RLLRP WFL V+     XXXXXXXXXXXXXXXXXXXXXX   VRDLEA+R PLE LRASIR  FPRAV EDLAALA    R+ AAA   EA A  GA LL+EAA+EWRGERALG DGQL+RACAALT +GRL AVVDVCMTCAKNF +          XXXXXXXXX++AWEEGVYQGGG+V +  REKARLECY RVL+ VVGLLK++     SA    G GG     +VD LI+RCL+Y +P + EMLFG+LEEHDK LL+ I TP VERYL+RDP  LF HYML KEY KAVHLMD EAR E   G HVR+RV+CL+KAISACHKCDL+S Q
Sbjct:  494 MRQEEHPSMREAVTEMGDSAGRQ-QQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXRAVVRGGRSTSGAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVVLFFNDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXPVAGSTXXXXCNPSVPAANGVPSHTVRARALDAALMICKPPGFSSPGQPAGGGIXXXXXXXGGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRDLEALRVPLESLRASIRAVFPRAVGEDLAALA----RLTAAA---EADARWGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGE----GVVASGXXXXXXXXXVEAWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQEQQQLRSATAAAGQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLEEHDKKLLMSIRTPGVERYLKRDPEDLFRHYMLSKEYPKAVHLMDCEARVEARSGVHVRHRVECLLKAISACHKCDLDSAQ 1147          
BLAST of mRNA_M-pyrifera_M_contig9793.22553.1 vs. uniprot
Match: A0A6H5J909_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J909_9PHAE)

HSP 1 Score: 389 bits (998), Expect = 1.580e-119
Identity = 295/630 (46.83%), Postives = 334/630 (53.02%), Query Frame = 1
Query:  643 MCFGIACGLPKDAGSGGGXXXX-----TGSMSPPGRTRSSPSSYGVPSHTVRARALDAAVLNCKPPGFSSPQAVAGAGAGVALE--------GVMMGEKFNNSALHNGLQLFLARLLRPVWFLSVITMSGGXXXXXXXXXXXXXXXXXXXXXXVPVVRDLEAMRAPLELLRASIRHAFPRAVSEDLAALAGKEARVAAAAPAE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAYANQGAALLSEAAKEWRGERALGEDGQLSRACAALTDLGRLGAVVDVCMTCAKNFEDDPRRATAXXXXXXXXXXXXLQAWEEGVYQGGGVVSSGDREKARLECYGRVLDTVVGLLKRKPSA-------PVGLGGGGEGRRPEVDGLISRCLAYDSPRMHEMLFGLLEEHDKSLLLRIGTPSVERYLERDPTLLFGHYMLHKEYAKAVHLMDREARAEPSKGKHVRNRVDCLVKAISACHKCDLNSPQ 1938
            MCF IACGLP+D G+G G XXX      GS    G   S P++YGVP+HTVRARALDAA++ CKPPGFSSP   AG G G+           GV+MGEKF NSALHNGLQLF+ RLLRP WFL V+     XXXXXXXXXXXXXXXXXXXXXX   VRDLEA+R PLE LRASIR  FPRAV EDLAALA +EA+ AAA PA                                                                                                                                                                                   EA A +GA LL+EAA+EWRGERALG DGQL+RACAALT +GRL AVVDVCMTCAKNF +          XXXXXXXX L+AWEEGVYQGGG+V +  REKARLECY RVL+ VVGLLK++              G GG     +VD LI+RCL+Y +P + EMLFG+LEEHDK LLL I TP VE+YL+RDP  LF HYML K+Y KAVHLMDREAR E   G HVR+RV+CL+KAISACHKCDL+S Q
Sbjct:    1 MCFSIACGLPRDLGTGCGGXXXXXXPVAGSTGGGGYNPSVPTAYGVPNHTVRARALDAALMICKPPGFSSPGQPAGGGIGIGXXXXVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRDLEALRVPLESLRASIRAVFPRAVGEDLAALASREAKAAAAVPASGGLLGNXXXXXXXXXXGLVVAPGGYPTPETPQQRNQKALKREALEVHAAYRLVSRAAEAVRMAGVLARAAASSAVGGAAAVDNVPWSSLDGVPLWRLVTGGDEHRRASFLLADLVGATTKGNNNAESRRDYARELGSWCRGFFGAGDRQTFEGVELLRRAAASGXXXXXXXXRLTAAAEADARRGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGE----GVVASGXXXXXXXXGLEAWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQERQQLRSAXXXXXXXGQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLEEHDKKLLLSIRTPGVEQYLKRDPEDLFRHYMLSKDYPKAVHLMDREARVEAGSGVHVRHRVECLLKAISACHKCDLDSAQ 626          
BLAST of mRNA_M-pyrifera_M_contig9793.22553.1 vs. uniprot
Match: A0A6H5J944_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J944_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.550e-37
Identity = 102/206 (49.51%), Postives = 125/206 (60.68%), Query Frame = 1
Query:   25 MREAVSDMGGS---------NNSGG--EPAMGKVWCISERPVSLADNPDGARLRTLALTTRTPSQAE---VTRTSTASRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILQRAMKWHKSNLHEARPVAPSPPLVASPGGSAGFQGGLLATKVGEVVPLPELGTQLFSDRREVLCLTSAGMQTLMKLRPVDHLYDLLAHNQAERV 600
            MREAV+++G S           +GG  + AMG+VW ISERPV+L DNP+  R+R L   +  PS ++              XXXXXXXXXXX                  +L RA  W +S+ + +RPVAPSPPLVASPGGSAGF GGL A  VG +V LPELG Q +SDRRE+LCLT AG+Q L +LRPVD LYDLL  +  E V
Sbjct:    1 MREAVTEIGDSASATDPTAGGGAGGRQQQAMGRVWAISERPVTLVDNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXSRAVVRGGRSVSGAVVGGVLSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLVRDHVEGV 206          
BLAST of mRNA_M-pyrifera_M_contig9793.22553.1 vs. uniprot
Match: A0A7R9YE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.150e-14
Identity = 77/237 (32.49%), Postives = 109/237 (45.99%), Query Frame = 1
Query:  358 ARPVAPSPPL-VASPGGSAGFQGGLLATKVGEVVPLPELGTQLFSDRREVLCLTSAGMQTLMKLRPVDHLYDLLAHNQAERVSLFFDDFSPDQSAAMCFGIACGLPKD---AGSGGGXXXXTGSMSPPGRTRSSPSSYGVPSHTVRARALDAAVLNCKP----PGFSSPQAVAG----AGAGVALEGV-------------MMGEKFNNSALHNGLQLFLARLLRPVWFLSVITMSG 993
            AR   P+PPL +A     +G   G+      EVVP+ E+  QL+  RR  L L++ G+   +K RP+D+LYDL++ +    +  FF  F  +QS AMCF IACGLP D   A S       T + S      ++ +S G   +    R  + AVL  +     P  S P +  G     G  VA  G              +   +F+ S  H GL L   R+LRP+WF  +I   G
Sbjct:  536 ARAAPPAPPLSLAYADRDSGA--GIGPANQKEVVPMNEMAMQLWLPRRTFLGLSNVGIHRFLKRRPIDYLYDLVSRDDIRGIGTFFQLFGKEQSCAMCFSIACGLPTDLVEAASAASVAFPTQNDS--ALALAAAASPGPSLNPTVERVRERAVLVAQQLGGNPSISPPLSSGGEATSTGMSVATPGTPGTPRHQPTAANTVFTPEFSYSDQHEGLVLLATRILRPLWFKPIILAEG 768          
BLAST of mRNA_M-pyrifera_M_contig9793.22553.1 vs. uniprot
Match: A0A1Y1YV87_9FUNG (Nucleoporin-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YV87_9FUNG)

HSP 1 Score: 64.3 bits (155), Expect = 6.800e-7
Identity = 52/172 (30.23%), Postives = 76/172 (44.19%), Query Frame = 1
Query:  466 ELGTQLFSDRREVLCLTSAGMQTLMKLRPVDHLYDLLAHNQAERVSL--FFDDFSPDQSAAMCFGIACGLPKDAGSGGGXXXXTGSMSPPGRTRSSPSSYGVPSHTVRARALDAAVLNCK---PPGFSSPQAVAGAGAGVALEGVMMGEKFNNSALHNGLQLFLARLLRPVW 966
            EL TQL    R  L LT++G+  L K RP+D    LL +   +   L  F D++   Q  AMC  I CG P  +GS               +T+   + +G  +   +   L A  +  K    P F         G+GV  E     + F  S  H+GL L++ARL++P+W
Sbjct:  477 ELATQLTFPPRHFLVLTNSGINILSKQRPIDVFVQLLHNPSTQEADLLSFIDNYGKAQICAMCLAIVCGHPAVSGST--------------QTKFQSAPFGHQASNNQTSVLGAKAVYIKYGGRPSFVESPTYTHGGSGV--ERQTPTQDFIYSGQHDGLALYIARLIKPIW 632          
BLAST of mRNA_M-pyrifera_M_contig9793.22553.1 vs. uniprot
Match: A0A6A5C0M1_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C0M1_NAEFO)

HSP 1 Score: 63.9 bits (154), Expect = 8.990e-7
Identity = 56/177 (31.64%), Postives = 79/177 (44.63%), Query Frame = 1
Query:  460 LPELGTQLFSDRREVLCLTSAGMQTLMKLRPVDHLYDLLAHNQAERV-SLFFDDFSPDQSAAMCFGIACGLPKDAGSGGGXXXXTGSMSPPGRTRSSPSSYGV--PSHTVRARALDAAVLNCKPPGFSSPQAVAGAGAGVALEGVMMG-----EKFNNSALHNGLQLFLARLLRPVW 966
            L E+  Q     RE +CL+S+GM  L+KLRPVD L  +L   Q E +   F   +  D++ AMC  +AC                   SPP     + SS  V    H +  RA +        P F   + V+           +MG     +  ++SA HNGL L+L+RLLRP+W
Sbjct:  489 LNEITVQHIKPPREFVCLSSSGMHLLIKLRPVDFLQQILQQTQPEELLKSFVSRYGEDETCAMCVMLAC-------------------SPPPYNTITDSSQIVYLDDHQLNRRAEETFFRFGGMPQF---EIVSDTRRNFLFNNDIMGGPVSTQDISHSAKHNGLYLYLSRLLRPLW 643          
BLAST of mRNA_M-pyrifera_M_contig9793.22553.1 vs. uniprot
Match: A0A433PJF9_9FUNG (Nucleoporin-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PJF9_9FUNG)

HSP 1 Score: 60.8 bits (146), Expect = 8.150e-6
Identity = 58/180 (32.22%), Postives = 81/180 (45.00%), Query Frame = 1
Query:  454 VPLPELGTQLFSDRREVLCLTSAGMQTLMKLRPVDHLYDLLAHNQAERVSL--FFDDFSPDQSAAMCFGIACGLPKDAGSGGGXXXXTGSMSPPGRTRSSPSSYGVPSHTVRARAL-------DAAVLNCKPPGFSSPQAVAGAGAGVALEGVMMGEKFNNSALHNGLQLFLARLLRPVW 966
            + L EL TQL    R+ L LT++G+  L K RP+D L  LL  +      L  FFD +   Q+ AMC GIAC  P  +           S +P     S+ +     S TV A A            LN +P   + P  V G      L  +M   + + S  H+GL L+ AR++RP+W
Sbjct:  568 IALNELATQLSRPPRQFLVLTNSGINVLSKQRPIDILQQLLIESGGNDQDLDYFFDMYGRAQACAMCLGIACFNPYAS-----------SAAPTRSFASAAAPVRGLSPTVVAGATRLFFEKGGKPALNDRP---APPPGVVGT---ADLGRLMTTSEPSFSGRHDGLALYFARIVRPIW 730          
BLAST of mRNA_M-pyrifera_M_contig9793.22553.1 vs. uniprot
Match: A0A4T0NRW4_9BASI (Mitochondrial genome maintenance protein MGM101 n=6 Tax=Wallemia mellicola TaxID=1708541 RepID=A0A4T0NRW4_9BASI)

HSP 1 Score: 58.5 bits (140), Expect = 4.260e-5
Identity = 57/190 (30.00%), Postives = 84/190 (44.21%), Query Frame = 1
Query:  448 EVVPLPELGTQLFSDRREVLCLTSAGMQTLMKLRPVDHLYDLLAHNQA----ERVSLFFDDFSPDQSAAMCFGIACGLPKDAGSGGGXXXXTGSMSPPGRTRSSPSSYGVPSHTVRARALDAAV-----LNCKPPGFSSPQAVAGAGAGVALEGVMMGEKFNNSALHNGLQLFLARLLRPVWFLSVITMS 990
            E V + EL  Q+    R  L LT+ G+  + K RP+D L ++L  +      + +  FF++F  DQS AM   IA G P     G         + P G   S+  +  VP  T+ A    +A         KP   S  +    A   + L+ +    +   S  HNGL L+L+RLLRP+W   V  +S
Sbjct:  683 EQVAMSELTVQMAYLPRRFLVLTNMGLSVIAKQRPIDILRNILESSSTGSRDQEIVSFFNNFGKDQSCAMALAIAAGNPVALSMGE-------DLYPAG---SNVVTEPVPPATLSADITQSARRLFYDFGGKP--VSIDRGYPTAATSMNLDALSTNTEILFSGRHNGLALYLSRLLRPIWKEKVTKLS 860          
BLAST of mRNA_M-pyrifera_M_contig9793.22553.1 vs. uniprot
Match: A0A4T0M6G6_9BASI (Mitochondrial genome maintenance protein MGM101 n=2 Tax=Wallemia mellicola TaxID=1708541 RepID=A0A4T0M6G6_9BASI)

HSP 1 Score: 58.5 bits (140), Expect = 4.440e-5
Identity = 57/190 (30.00%), Postives = 84/190 (44.21%), Query Frame = 1
Query:  448 EVVPLPELGTQLFSDRREVLCLTSAGMQTLMKLRPVDHLYDLLAHNQA----ERVSLFFDDFSPDQSAAMCFGIACGLPKDAGSGGGXXXXTGSMSPPGRTRSSPSSYGVPSHTVRARALDAAV-----LNCKPPGFSSPQAVAGAGAGVALEGVMMGEKFNNSALHNGLQLFLARLLRPVWFLSVITMS 990
            E V + EL  Q+    R  L LT+ G+  + K RP+D L ++L  +      + +  FF++F  DQS AM   IA G P     G         + P G   S+  +  VP  T+ A    +A         KP   S  +    A   + L+ +    +   S  HNGL L+L+RLLRP+W   V  +S
Sbjct: 1199 EQVAMSELTVQMAYLPRRFLVLTNMGLSVIAKQRPIDILRNILESSSTGSRDQEIVSFFNNFGKDQSCAMALAIAAGNPVALSMGE-------DLYPAG---SNVVTEPVPPATLSADITQSARRLFYDFGGKP--VSIDRGYPTAATSMNLDALSTNTEILFSGRHNGLALYLSRLLRPIWKEKVTKLS 1376          
BLAST of mRNA_M-pyrifera_M_contig9793.22553.1 vs. uniprot
Match: A0A4T0FIC1_9BASI (Mitochondrial genome maintenance protein MGM101 n=1 Tax=Wallemia hederae TaxID=1540922 RepID=A0A4T0FIC1_9BASI)

HSP 1 Score: 58.2 bits (139), Expect = 5.720e-5
Identity = 60/185 (32.43%), Postives = 83/185 (44.86%), Query Frame = 1
Query:  448 EVVPLPELGTQLFSDRREVLCLTSAGMQTLMKLRPVDHLYDLLAHNQA----ERVSLFFDDFSPDQSAAMCFGIACGLPKDAGSGGGXXXXTGSMSPPGRTRSSPSSYGVPSHTVRARALDAAVLNCKPPGFSSPQAVAGAGAGVALEGVMMGEKFNNSALHNGLQLFLARLLRPVWFLSVITMS 990
            E V + EL  Q     R  L LT+ G+  + K RPVD L ++L  +      + +  FF++F  DQS AM   IA G P  A S G      GS +    T  +P +      T  AR L       KP   S  +    A   + L+ +    +   S  HNGL L+L+RLLRP+W   V  +S
Sbjct:  913 EQVAMSELTVQTAYLPRRFLVLTNMGLSVIAKQRPVDILRNILESSSTSSRDQEIVSFFNNFGKDQSCAMALAIAAGNPV-ALSMGEDLYPAGSNT---ATEPTPPATLSADITQSARRLFYD-FGGKP--VSIDRGYPAAATSMNLDSLTTNTEILFSGRHNGLVLYLSRLLRPIWKEKVSKLS 1090          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9793.22553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G0M6_ECTSI5.970e-20562.61Nucleoporin_N domain-containing protein n=1 Tax=Ec... [more]
A0A6H5J909_9PHAE1.580e-11946.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J944_9PHAE1.550e-3749.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9YE90_9STRA1.150e-1432.49Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A1Y1YV87_9FUNG6.800e-730.23Nucleoporin-domain-containing protein n=1 Tax=Basi... [more]
A0A6A5C0M1_NAEFO8.990e-731.64Uncharacterized protein n=2 Tax=Naegleria TaxID=57... [more]
A0A433PJF9_9FUNG8.150e-632.22Nucleoporin-domain-containing protein n=1 Tax=Endo... [more]
A0A4T0NRW4_9BASI4.260e-530.00Mitochondrial genome maintenance protein MGM101 n=... [more]
A0A4T0M6G6_9BASI4.440e-530.00Mitochondrial genome maintenance protein MGM101 n=... [more]
A0A4T0FIC1_9BASI5.720e-532.43Mitochondrial genome maintenance protein MGM101 n=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9793contigM-pyrifera_M_contig9793:1014..6742 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score618.6
Seed ortholog evalue3.2e-174
Seed eggNOG ortholog2880.D7G0M6
Preferred nameNUP155
KEGG koko:K14312
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000280,GO:0000972,GO:0001508,GO:0001555,GO:0001654,GO:0003006,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003674,GO:0003682,GO:0005198,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005730,GO:0005737,GO:0005886,GO:0005911,GO:0006403,GO:0006405,GO:0006406,GO:0006606,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006936,GO:0006941,GO:0006996,GO:0006997,GO:0006998,GO:0007010,GO:0007015,GO:0007017,GO:0007049,GO:0007051,GO:0007053,GO:0007088,GO:0007096,GO:0007140,GO:0007154,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007295,GO:0007300,GO:0007303,GO:0007346,GO:0007423,GO:0007444,GO:0008015,GO:0008016,GO:0008104,GO:0008150,GO:0008152,GO:0008284,GO:0009506,GO:0009507,GO:0009536,GO:0009790,GO:0009792,GO:0009888,GO:0009987,GO:0009994,GO:0010256,GO:0010467,GO:0010564,GO:0010941,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016049,GO:0016482,GO:0017038,GO:0017056,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030029,GO:0030036,GO:0030048,GO:0030054,GO:0030154,GO:0030715,GO:0030717,GO:0031090,GO:0031503,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0035220,GO:0035295,GO:0035637,GO:0036228,GO:0040007,GO:0042127,GO:0042306,GO:0042307,GO:0042391,GO:0042886,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043900,GO:0043902,GO:0044057,GO:0044085,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044611,GO:0044703,GO:0045184,GO:0045477,GO:0045595,GO:0046822,GO:0046824,GO:0046907,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048588,GO:0048589,GO:0048599,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0051028,GO:0051049,GO:0051050,GO:0051128,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051222,GO:0051223,GO:0051225,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051276,GO:0051321,GO:0051641,GO:0051649,GO:0051704,GO:0051726,GO:0051783,GO:0055044,GO:0055049,GO:0055050,GO:0060047,GO:0060048,GO:0060284,GO:0060341,GO:0060429,GO:0061024,GO:0061337,GO:0061982,GO:0061988,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0070201,GO:0070252,GO:0070727,GO:0070925,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072594,GO:0072657,GO:0086001,GO:0086002,GO:0086003,GO:0086014,GO:0086019,GO:0086026,GO:0086065,GO:0086066,GO:0090087,GO:0090306,GO:0090316,GO:0090435,GO:0097435,GO:0140013,GO:1900180,GO:1900182,GO:1901987,GO:1901990,GO:1903046,GO:1903522,GO:1903827,GO:1903829,GO:1904589,GO:1904591,GO:1904748,GO:1904951,GO:1905475,GO:1905879,GO:1905936,GO:1905938,GO:2000241,GO:2000243
EggNOG free text desc.protein localization to nuclear inner membrane
EggNOG OGsCOG5308@1,KOG1900@2759
Ec32 ortholog descriptionNucleoporin, Nup133/Nup155-like, C-terminal
Ec32 orthologEc-07_001530.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019
Exons7
Model size1938
Cds size1914
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9793.22553.1prot_M-pyrifera_M_contig9793.22553.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9793 1038..6742 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816896.5736232-UTR-M-pyrifera_M_contig9793:1013..10371622816896.5736232-UTR-M-pyrifera_M_contig9793:1013..1037Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9793 1014..1037 +
1692278242.509428-UTR-M-pyrifera_M_contig9793:1013..10371692278242.509428-UTR-M-pyrifera_M_contig9793:1013..1037Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9793 1014..1037 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816896.5864148-CDS-M-pyrifera_M_contig9793:1037..13051622816896.5864148-CDS-M-pyrifera_M_contig9793:1037..1305Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 1038..1305 +
1692278242.5226252-CDS-M-pyrifera_M_contig9793:1037..13051692278242.5226252-CDS-M-pyrifera_M_contig9793:1037..1305Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 1038..1305 +
1622816896.5979838-CDS-M-pyrifera_M_contig9793:1353..16581622816896.5979838-CDS-M-pyrifera_M_contig9793:1353..1658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 1354..1658 +
1692278242.534125-CDS-M-pyrifera_M_contig9793:1353..16581692278242.534125-CDS-M-pyrifera_M_contig9793:1353..1658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 1354..1658 +
1622816896.608983-CDS-M-pyrifera_M_contig9793:3163..37691622816896.608983-CDS-M-pyrifera_M_contig9793:3163..3769Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 3164..3769 +
1692278242.552978-CDS-M-pyrifera_M_contig9793:3163..37691692278242.552978-CDS-M-pyrifera_M_contig9793:3163..3769Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 3164..3769 +
1622816896.6206276-CDS-M-pyrifera_M_contig9793:4318..45391622816896.6206276-CDS-M-pyrifera_M_contig9793:4318..4539Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 4319..4539 +
1692278242.564487-CDS-M-pyrifera_M_contig9793:4318..45391692278242.564487-CDS-M-pyrifera_M_contig9793:4318..4539Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 4319..4539 +
1622816896.6325326-CDS-M-pyrifera_M_contig9793:4803..50771622816896.6325326-CDS-M-pyrifera_M_contig9793:4803..5077Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 4804..5077 +
1692278242.5751069-CDS-M-pyrifera_M_contig9793:4803..50771692278242.5751069-CDS-M-pyrifera_M_contig9793:4803..5077Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 4804..5077 +
1622816896.6433208-CDS-M-pyrifera_M_contig9793:5683..57971622816896.6433208-CDS-M-pyrifera_M_contig9793:5683..5797Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 5684..5797 +
1692278242.5864444-CDS-M-pyrifera_M_contig9793:5683..57971692278242.5864444-CDS-M-pyrifera_M_contig9793:5683..5797Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 5684..5797 +
1622816896.6551752-CDS-M-pyrifera_M_contig9793:6616..67421622816896.6551752-CDS-M-pyrifera_M_contig9793:6616..6742Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 6617..6742 +
1692278242.5999048-CDS-M-pyrifera_M_contig9793:6616..67421692278242.5999048-CDS-M-pyrifera_M_contig9793:6616..6742Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9793 6617..6742 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9793.22553.1

>prot_M-pyrifera_M_contig9793.22553.1 ID=prot_M-pyrifera_M_contig9793.22553.1|Name=mRNA_M-pyrifera_M_contig9793.22553.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=638bp
MREAVSDMGGSNNSGGEPAMGKVWCISERPVSLADNPDGARLRTLALTTR
TPSQAEVTRTSTASRGGSRSSGRGGGRGGDSGSGSRSSSGGGVSGGILQR
AMKWHKSNLHEARPVAPSPPLVASPGGSAGFQGGLLATKVGEVVPLPELG
TQLFSDRREVLCLTSAGMQTLMKLRPVDHLYDLLAHNQAERVSLFFDDFS
PDQSAAMCFGIACGLPKDAGSGGGGSGGTGSMSPPGRTRSSPSSYGVPSH
TVRARALDAAVLNCKPPGFSSPQAVAGAGAGVALEGVMMGEKFNNSALHN
GLQLFLARLLRPVWFLSVITMSGGGSGGSGSKRSADGKTKGGGGGGVPVV
RDLEAMRAPLELLRASIRHAFPRAVSEDLAALAGKEARVAAAAPAEEAYA
NQGAALLSEAAKEWRGERALGEDGQLSRACAALTDLGRLGAVVDVCMTCA
KNFEDDPRRATASSSGSGGAGGGGLQAWEEGVYQGGGVVSSGDREKARLE
CYGRVLDTVVGLLKRKPSAPVGLGGGGEGRRPEVDGLISRCLAYDSPRMH
EMLFGLLEEHDKSLLLRIGTPSVERYLERDPTLLFGHYMLHKEYAKAVHL
MDREARAEPSKGKHVRNRVDCLVKAISACHKCDLNSPQ
back to top

mRNA from alignment at M-pyrifera_M_contig9793:1014..6742+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9793.22553.1 ID=mRNA_M-pyrifera_M_contig9793.22553.1|Name=mRNA_M-pyrifera_M_contig9793.22553.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5729bp|location=Sequence derived from alignment at M-pyrifera_M_contig9793:1014..6742+ (Macrocystis pyrifera P11B4 male)
CTCCCCCAGGAAGAACACCCTTGGATGAGAGAAGCCGTCAGCGACATGGG AGGCAGCAACAACTCCGGCGGCGAGCCCGCGATGGGAAAAGTCTGGTGCA TTTCCGAGAGACCCGTCTCTCTTGCCGACAACCCCGACGGAGCACGCCTC CGTACCCTTGCTCTCACCACGAGAACGCCCTCCCAAGCTGAGGTTACCCG CACCTCTACCGCTAGCCGGGGCGGTTCCAGGAGCAGTGGTCGTGGTGGTG GCCGTGGCGGTGACTCGGGCTCTGGCTCGAGGTCTAGTTCGGGTCCGCGT GGTAGTGCAGCGACAGCGGTAGCCAAGCGCTCGAGTGGAGGAGGCGGTGT AAGTGGGGGCATCCTACAGCGTGCCATGAAGTGGCACAAGAGTAACCTCC ACGAGGCTCGACCCGTCGCGCCTTCCCCTCCCCTCGTCGCCTCCCCCGGT GGGTCGGCGGGCTTCCAGGGGGGGCTGCTGGCCACGAAGGTCGGGGAGGT GGTGCCCCTGCCCGAGCTGGGCACGCAGCTGTTCAGCGACAGGAGGGAAG TGCTGTGCTTGACGAGCGCCGGGATGCAGACCTTGATGAAGCTCCGACCG GTCGATCACTTGTATGATCTGCTCGCGCATAACCAGGCTGAACGGGTGAG ACGTGGGTTTTTTTGTGGTCGGAGGCGGGGGTGATTGGGGGTTGAGGCGG GGGTGGGGGGGGGCGGTGTACTCGTTTGTTGGTTGCCTTGTGTCGTTTGA CCATTGACCACGCATGCCTTTCGAGACGGAGCACCGTTCCTACTCCTATT TGAGAGGGGGGGGGGTACGGGTAGGGGACTGGGTCGGGGTGAGGGTTGGG GGGAAGAAACAGGGCGGGGAGGGTAGGGCGGGAGCTACTGGGGTGGGGGA CTTTTGATATTCGAGTAGCAGAGTTGGGGATTTCCTGCAAATGTTTTGTA CTGTTTCCGCGGAAGAGAGGGCTCGGGAGTCAACGCCCTTAAGCTGTTTT GATGAACAGAGAACCTTTCACCTACACCTGAAGAGTTTACCATGAAAGTA GCGTCATTGATCGTGCGAAACGTAAAAATCTGCCTATCTTCCACCCCCTC TTGCTTCCCGGTTTGTACACCACCGCCGCTCCGCTCCCCTCTCCTCCCCT CCCTTCCTCCCTCGTTTCCCTCCCCTCTCTCTCTTCCCTCTCCTCCCCTC CCCCGACTTGTTTGTATCCCTAGTCTATTTCCAAGTAGTTTGTTCCCAAA AACTTGGGGTGGAGTTGTAGAGGGGCGGGATATCCAAACGGGGGTTATAT ACAACATATGATTTATACGACCGACAAGAGTGGTGCTCGTAGTGTGTTCG ACATGACCCGGTTTTGTTTAAGAGTTGTTGATTTTCCCCAACTAGCGGCA ACTCCTTCCTGGCTGCAGCTTCATTCTCGAGAATTTTCCCAGGTGGGTGC TGCTAGAGTGTATGGGGGGCAGGGTTTATAGTGTTTTGTTAGCAAGTATT TTTCAACTTTTTTTCGATGCTGGGCCCCAAGTCCTTGGTAGGTGTATCCC CTCCAAGTAGGCCAACGACTTGTCGCCAAATCTAACACCCGCGGTACTCG CGAGCATGTTAGCTTTTTTTCATGACTTTTATTTAGCATAGTCATACTAA ACGCCATATAAATCAAGTGTATGTATTTAGGTATGTCCATTTATCAATCG TAGGACTTTTCAGTAAGACGATACTAAAATGTCATACAGTTGTATATATA TGGGCTTTATTATACTTTACTAAACGCCATATAGTTATGGGATCCCAAAT ACTCTTGAGTGTCGAGAGCATATATTTTGGCGAAAAGGGGGTTTGTGCTC GCCGAGTGTGTCTACGTACCCGTTTTTTTCTGAATAGGTTTACGGTACAC CTGTACTGTACAGTCCTCCAGCAAGTGTTTTTACGAAATATCATATCTTT AATAAAAGCGATTGATATTCCGATTATAACCGTTGCACCTGCTCTTGATA TTCTTTGATATAAAAGTTACACCTGCTCTTGATATTATTTGATATGAAAG ATGCCTCTTGCCGGAAACCCCTCCTCCCCCCCCCGCCCACCCATCGTCAA CAAAATAATAATAGTGAAAAATTACCCTCCCTATTTTTTTTATGTAAAAG GTGAGCCTCTTCTTCGACGACTTCAGCCCGGACCAGTCCGCGGCGATGTG CTTCGGCATCGCCTGCGGATTGCCTAAAGACGCTGGAAGCGGCGGTGGCG GGAGCGGGGGGACAGGGTCAATGTCCCCCCCTGGAAGAACGAGGTCCTCC CCATCATCGTACGGTGTCCCCAGCCACACGGTACGCGCCCGCGCGCTCGA CGCGGCCGTTCTGAACTGCAAGCCTCCGGGTTTCAGCAGCCCGCAGGCGG TTGCGGGGGCGGGGGCGGGGGTGGCCCTGGAAGGCGTTATGATGGGGGAG AAGTTCAACAACAGCGCTCTCCACAATGGTCTGCAGCTGTTCCTGGCGCG CTTGTTGCGACCTGTTTGGTTTTTGTCTGTGATTACGATGAGCGGGGGCG GCAGTGGCGGCAGCGGGTCTAAGCGCTCCGCGGATGGGAAGACGAAGGGG GGAGGGGGCGGGGGGGTGCCCGTGGTGCGGGACCTTGAAGCCATGCGTGC CCCGCTCGAGCTGCTGAGGGCTAGCATCCGACACGCTTTCCCCCGCGCGG TTAGCGAAGACCTGGCGGCTTTGGCGGGGAAGGAGGCGAGAGTGGCCGCC GCGGCGGTGGCGGCGGCGGCGGAGGCGGGGGAGGTGCTGCCGCGCCGGGG CGGAGCTCGTAAGCAGCAGCAGCAGCAGCAGCAGATTCAGATACAACAAC CAGACACGCCCCAGCAGAGGCACCAGAAGGCGCTCAAACGAGAAGCGCTC GAGGTGCACGCTGCTTACCGGCTAGCGTCGCGCGCAGCGGAGGCCGTGCG CATGGTTGCAGTACTCGCGCGCGCTGGCGCTGCCGCCGCTAAAGTCCCCT GGAACTCCCTTGCCGGCGTCCCACTCTGGAAGATCGTGTCTGGGGGAGGT GAGCACCGGAAGGCTTCTTCGCTCCTGGCGGACCTGGTGGGTCCCCGCGG TGGACTCCCCGCGCAGACCCGCGACGAGTACGCGAGGGAGCTGTCCCAGG GGTGCCCTACGTTCTTTAGTCCTGGCGACCACCGAGCGTTCGAGGGAGTA GAGCTTCTTGGGAGGGCTGGGCAGGCGTACCGGGTTGGTGGTGGTGGCGG TGGTGGCGGCAGTGGAGCCGCTGCTACCCTTAGCATTCCGGCGGGTGGCC TGAAGCCGGCCGAAGAGGCGTACGCGAATCAGGGGGCGGCGCTGCTAAGC GAGGCGGCAAAGGAGTGGCGCGGGGAGCGGGCGCTGGGGGAAGACGGGCA GCTCTCGCGAGCGTGCGCGGCGCTGACGGACCTGGGTCGCCTGGGAGCCG TGGTGGACGTGTGCATGACTTGCGCGAAGAATTTCGAGGACGACCCCCGT CGAGCTACCGCCTCCTCTTCCGGCTCGTCCTCCTCTCTTGGTTCCTCTTC GGGCCCCTCGTTTTTTGCCGGGGTGGCATTTCCGGTTTCCGGTTCAGGTG CCGGTTCGAGTTATGGTTCTGCCGCGTCCTTTTCCGCGAATTCTGCTGCG GGAACGGTAGCGCTTTCTGGAGGCGTGTATGGGCGGGATGGGTCGATGGG GGGCGGGTTTATGGGCCAGGGCGTGCCAGGTTCGGGGGGGGGGGCGGCGG CCGGGGGAGGCATTAGAAGGAGTGGTGATGGTGATGGTAGTGGGGGGGCG GGGGGAGGAGGACTTCAAGCGTGGGAAGAAGGCGTTTATCAGGGAGGGGG CGTTGTGAGCTCCGGGGACCGGGAGAAGGCTAGGTTGGAGTGCTACGGGA GGGTTCTCGATACCGTGGTTGGCTTGCTGAAGAGGAAGCCGTCTGCTCCT GTGGGGCTAGGGGGGGGGGGCGAGGGGCGGCGTCCGGAGGTGGATGGCCT AATTTCGCGGTGCCTGGCGTACGATTCTCCGCGGATGCACGAGATGCTGT TCGGGCTGCTCGAGGTGGGCGGGAAATGCGATATTCTCCAGTATTCAGTG CGTACCGGTGGCTTTTCTCGTGGGCTGAATTGCTTGCTTGATTTTGTCTG CTTGATTGGCTGCTTGAGAGTTTGACTGACTGGCTGATTGATTTGTTGAT CGATTGATTGGTTGATTGATTGATTGATTGATTGATTGCCTGGACGATTG CTTGGGCTATGGATCATTTTTTCGATTTATTGCTTAAATCGATTGTATCA TGGAATCATTGATTCTTTGACCGTTTTATTGATGGACTGGTTGATATATT GCGCGATTGATTCTCTGACTGAGTGGCTAACTGGTTGGTGGATTGCTTGG TTGAGCTATTGATATGATTGATTGCTTGATTGACTGACTGACTGGCTGAC TGATTGATCGAGTGCTTGGTTGCTTGGCGGATTGCTTGATCAACCCACCG ACTGACTGATTTGCTTGCTCGATCGGCTGTCTGACTTTTGATTAAATTGC TTGATTTTTACCGACTGCCTGACAGATCGATTGCTTAAGTGCTTGATTGG TTTTGATGTATTCAATTGATTCATTGGTTGATTCACTGATTTGATTGGTC CATCGCTCGATTGCTGCCAGGAACACGATAAGAGCTTGCTGCTGCGCATC GGAACGCCAAGCGTGGAGCGTTACCTCGAACGGGACCCAACCCTCCTCTT CGGGCACTACATGCTGCACAAGGAGTACGCCAAGGTACTTCTGGGGATGG TTGTGATGAGGGAGGTGGCGAGTGTTGGTATTGGTGTTGGTGTTGGTGGT GTTAGGGATGGCGTGCGTAGTAGGGGATAAAGGTGGTGGGGATGGTGTTG CTGAGGATGAAGGCGGTGGGGGAGTAGTAAGTGTTGGTGTTGGTGTTGGT GGTGTTAGTGGTAGTGGTGGTGGTGGTGGTGGTGGGCGATGGCGAGGGTG TTGGTCTCGGGGTTTGTGGGATTTGAGTTGGTGGCGGCGGTAGTGTTTCT ATTGGTGGTGTTGTTTGTGGGGGGGGGGGTTGTTGGCGATAATGGTGGCG GTGTTGGTGTTGGCGGTGATGCGGCGCTGAAACTGGTGATGGTGCTGGTG GTGGGTGTTAGTAGAGACGGTAGTGGCGGTTTTGGTGTTGGTGTTGGTGT TGTCGCTGTTTCTGTCGCTTTGTTTAAGGAGCGACGGCGAATTTGGTGGA AACGAGACCACAGTTGGAGGTACAAAGGGCGGAGACACGCATAACCTCTT CCAGCGGTACACGAAAAAATACAAAATCGGCACCCATTTCCGACACCTGG ACAGAGGGACGGGGTATCCCAAAACCAAGTAAAAAACAAACTAAGAAGAC TTTTTTTTTTTGGTCTTTTTTTTTATCCCATCCCACTTTGTGGTTGGTTC GTTCAAGCGTCAAGGGAGCGGTGGTTTCTTTTTCTATTTTTTGTCGTGTA CCCCTCCCTGCCTCTTGTGTCGATCGTTCGATGCCAGAGGATATTCGCGG CCACTGAATCCCCGCCTTCCCTCCGCCCCCGGTCCCCTCGTTCACGCAAA CAGGCGGTGCACCTGATGGATCGAGAGGCGCGCGCGGAGCCGAGCAAAGG AAAGCACGTACGAAACCGCGTCGACTGTCTGGTCAAGGCCATCTCCGCCT GCCACAAGTGCGACCTCAACTCCCCGCAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig9793:1014..6742+

>mRNA_M-pyrifera_M_contig9793.22553.1 ID=mRNA_M-pyrifera_M_contig9793.22553.1|Name=mRNA_M-pyrifera_M_contig9793.22553.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3828bp|location=Sequence derived from alignment at M-pyrifera_M_contig9793:1014..6742+ (Macrocystis pyrifera P11B4 male)
ATGAGAGAAGCCGTCAGCGACATGGGAGGCAGCAACAACTCCGGCGGCGA
GCCCGCGATGGGAAAAGTCTGGTGCATTTCCGAGAGACCCGTCTCTCTTG
CCGACAACCCCGACGGAGCACGCCTCCGTACCCTTGCTCTCACCACGAGA
ACGCCCTCCCAAGCTGAGGTTACCCGCACCTCTACCGCTAGCCGGGGCGG
TTCCAGGAGCAGTGGTCGTGGTGGTGGCCGTGGCGGTGACTCGGGCTCTG
GCTCGAGGTCTAGTTCGGATGAGAGAAGCCGTCAGCGACATGGGAGGCAG
CAACAACTCCGGCGGCGAGCCCGCGATGGGAAAAGTCTGGTGCATTTCCG
AGAGACCCGTCTCTCTTGCCGACAACCCCGACGGAGCACGCCTCCGTACC
CTTGCTCTCACCACGAGAACGCCCTCCCAAGCTGAGGTTACCCGCACCTC
TACCGCTAGCCGGGGCGGTTCCAGGAGCAGTGGTCGTGGTGGTGGCCGTG
GCGGTGACTCGGGCTCTGGCTCGAGGTCTAGTTCGGGAGGCGGTGTAAGT
GGGGGCATCCTACAGCGTGCCATGAAGTGGCACAAGAGTAACCTCCACGA
GGCTCGACCCGTCGCGCCTTCCCCTCCCCTCGTCGCCTCCCCCGGTGGGT
CGGCGGGCTTCCAGGGGGGGCTGCTGGCCACGAAGGTCGGGGAGGTGGTG
CCCCTGCCCGAGCTGGGCACGCAGCTGTTCAGCGACAGGAGGGAAGTGCT
GTGCTTGACGAGCGCCGGGATGCAGACCTTGATGAAGCTCCGACCGGTCG
ATCACTTGTATGATCTGCTCGCGCATAACCAGGCTGAACGGGAGGCGGTG
TAAGTGGGGGCATCCTACAGCGTGCCATGAAGTGGCACAAGAGTAACCTC
CACGAGGCTCGACCCGTCGCGCCTTCCCCTCCCCTCGTCGCCTCCCCCGG
TGGGTCGGCGGGCTTCCAGGGGGGGCTGCTGGCCACGAAGGTCGGGGAGG
TGGTGCCCCTGCCCGAGCTGGGCACGCAGCTGTTCAGCGACAGGAGGGAA
GTGCTGTGCTTGACGAGCGCCGGGATGCAGACCTTGATGAAGCTCCGACC
GGTCGATCACTTGTATGATCTGCTCGCGCATAACCAGGCTGAACGGGTGA
GCCTCTTCTTCGACGACTTCAGCCCGGACCAGTCCGCGGCGATGTGCTTC
GGCATCGCCTGCGGATTGCCTAAAGACGCTGGAAGCGGCGGTGGCGGGAG
CGGGGGGACAGGGTCAATGTCCCCCCCTGGAAGAACGAGGTCCTCCCCAT
CATCGTACGGTGTCCCCAGCCACACGGTACGCGCCCGCGCGCTCGACGCG
GCCGTTCTGAACTGCAAGCCTCCGGGTTTCAGCAGCCCGCAGGCGGTTGC
GGGGGCGGGGGCGGGGGTGGCCCTGGAAGGCGTTATGATGGGGGAGAAGT
TCAACAACAGCGCTCTCCACAATGGTCTGCAGCTGTTCCTGGCGCGCTTG
TTGCGACCTGTTTGGTTTTTGTCTGTGATTACGATGAGCGGGGGCGGCAG
TGGCGGCAGCGGGTCTAAGCGCTCCGCGGATGGGAAGACGAAGGGGGGAG
GGGGCGGGGGGGTGCCCGTGGTGCGGGACCTTGAAGCCATGCGTGCCCCG
CTCGAGCTGCTGAGGGCTAGCATCCGACACGCTTTCCCCCGCGCGGTTAG
CGAAGACCTGGCGGCTTTGGCGGGGAAGGAGGCGAGAGTGGCCGCCGCGG
CGGTGAGCCTCTTCTTCGACGACTTCAGCCCGGACCAGTCCGCGGCGATG
TGCTTCGGCATCGCCTGCGGATTGCCTAAAGACGCTGGAAGCGGCGGTGG
CGGGAGCGGGGGGACAGGGTCAATGTCCCCCCCTGGAAGAACGAGGTCCT
CCCCATCATCGTACGGTGTCCCCAGCCACACGGTACGCGCCCGCGCGCTC
GACGCGGCCGTTCTGAACTGCAAGCCTCCGGGTTTCAGCAGCCCGCAGGC
GGTTGCGGGGGCGGGGGCGGGGGTGGCCCTGGAAGGCGTTATGATGGGGG
AGAAGTTCAACAACAGCGCTCTCCACAATGGTCTGCAGCTGTTCCTGGCG
CGCTTGTTGCGACCTGTTTGGTTTTTGTCTGTGATTACGATGAGCGGGGG
CGGCAGTGGCGGCAGCGGGTCTAAGCGCTCCGCGGATGGGAAGACGAAGG
GGGGAGGGGGCGGGGGGGTGCCCGTGGTGCGGGACCTTGAAGCCATGCGT
GCCCCGCTCGAGCTGCTGAGGGCTAGCATCCGACACGCTTTCCCCCGCGC
GGTTAGCGAAGACCTGGCGGCTTTGGCGGGGAAGGAGGCGAGAGTGGCCG
CCGCGGCGCCGGCCGAAGAGGCGTACGCGAATCAGGGGGCGGCGCTGCTA
AGCGAGGCGGCAAAGGAGTGGCGCGGGGAGCGGGCGCTGGGGGAAGACGG
GCAGCTCTCGCGAGCGTGCGCGGCGCTGACGGACCTGGGTCGCCTGGGAG
CCGTGGTGGACGTGTGCATGACTTGCGCGAAGAATTTCGAGGACGACCCC
CGTCGAGCTACCGCCTCCTCTTCCGGCTCCCGGCCGAAGAGGCGTACGCG
AATCAGGGGGCGGCGCTGCTAAGCGAGGCGGCAAAGGAGTGGCGCGGGGA
GCGGGCGCTGGGGGAAGACGGGCAGCTCTCGCGAGCGTGCGCGGCGCTGA
CGGACCTGGGTCGCCTGGGAGCCGTGGTGGACGTGTGCATGACTTGCGCG
AAGAATTTCGAGGACGACCCCCGTCGAGCTACCGCCTCCTCTTCCGGCTC
TGGGGGGGCGGGGGGAGGAGGACTTCAAGCGTGGGAAGAAGGCGTTTATC
AGGGAGGGGGCGTTGTGAGCTCCGGGGACCGGGAGAAGGCTAGGTTGGAG
TGCTACGGGAGGGTTCTCGATACCGTGGTTGGCTTGCTGAAGAGGAAGCC
GTCTGCTCCTGTGGGGCTAGGGGGGGGGGGCGAGGGGCGGCGTCCGGAGG
TGGATGGCCTAATTTCGCGGTGCCTGGCGTACGATTCTCCGCGGATGCAC
GAGATGCTGTTCGGGCTGCTCGAGTGGGGGGGCGGGGGGAGGAGGACTTC
AAGCGTGGGAAGAAGGCGTTTATCAGGGAGGGGGCGTTGTGAGCTCCGGG
GACCGGGAGAAGGCTAGGTTGGAGTGCTACGGGAGGGTTCTCGATACCGT
GGTTGGCTTGCTGAAGAGGAAGCCGTCTGCTCCTGTGGGGCTAGGGGGGG
GGGGCGAGGGGCGGCGTCCGGAGGTGGATGGCCTAATTTCGCGGTGCCTG
GCGTACGATTCTCCGCGGATGCACGAGATGCTGTTCGGGCTGCTCGAGGA
ACACGATAAGAGCTTGCTGCTGCGCATCGGAACGCCAAGCGTGGAGCGTT
ACCTCGAACGGGACCCAACCCTCCTCTTCGGGCACTACATGCTGCACAAG
GAGTACGCCAAGGAACACGATAAGAGCTTGCTGCTGCGCATCGGAACGCC
AAGCGTGGAGCGTTACCTCGAACGGGACCCAACCCTCCTCTTCGGGCACT
ACATGCTGCACAAGGAGTACGCCAAGGCGGTGCACCTGATGGATCGAGAG
GCGCGCGCGGAGCCGAGCAAAGGAAAGCACGTACGAAACCGCGTCGACTG
TCTGGTCAAGGCCATCTCCGCCTGCCACAAGTGCGACCTCAACTCCCCGC
AGGCGGTGCACCTGATGGATCGAGAGGCGCGCGCGGAGCCGAGCAAAGGA
AAGCACGTACGAAACCGCGTCGACTGTCTGGTCAAGGCCATCTCCGCCTG
CCACAAGTGCGACCTCAACTCCCCGCAG
back to top