mRNA_M-pyrifera_M_contig97909.22544.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97909.22544.1
Unique NamemRNA_M-pyrifera_M_contig97909.22544.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig97909.22544.1 vs. uniprot
Match: L8HGP6_ACACA (Histone acetyltransferase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGP6_ACACA)

HSP 1 Score: 105 bits (263), Expect = 1.140e-24
Identity = 58/117 (49.57%), Postives = 74/117 (63.25%), Query Frame = 1 
Query:    1 VQIFVLLEIDGGTYIEARDPRWEFYGLFEHRRRASGEESYRCIGYCTAYRFYSLKHSFRLRISQFLLLAPHQKRGHGRRLLSAIYEHARAR-----GVRDIPVEDPAPEFMRLRGLS 336
            +Q+F++  ID  +YI+  D  WE Y +FE +RR  GE  Y  +GY T Y F+S     RLRISQFL+L P QK+GHG +LL AIY  A  R      VRDI VEDP+PEF  LR ++
Sbjct:  189 IQLFLIWFIDRSSYIDDTDLDWELYFIFE-KRRTFGETRYSIVGYATVYPFFSFPDQRRLRISQFLILPPFQKQGHGEQLLRAIYREAWGRTGLYESVRDITVEDPSPEFKLLRDIT 304
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BLAST of mRNA_M-pyrifera_M_contig97909.22544.1 vs. uniprot
Match: A0A1C7N465_9FUNG (Histone acetyltransferase type B catalytic subunit n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N465_9FUNG)

HSP 1 Score: 102 bits (255), Expect = 1.190e-23
Identity = 50/110 (45.45%), Postives = 74/110 (67.27%), Query Frame = 1 
Query:    1 VQIFVLLEIDGGTYIEARDPRWEFYGLFEHRRRASGEESYRCIGYCTAYRFYSLKHSFRLRISQFLLLAPHQKRGHGRRLLSAIYEHARAR-GVRDIPVEDPAPEFMRLR 327
            +Q+FVLL I+G +YIE+ D +WE Y LF+  +    + +Y  +GYCTAY FY    + R+RISQFL+L P++K+GHG +L   +YE  ++R  V ++ VEDP  EF  +R
Sbjct:  178 MQLFVLLFIEGSSYIESDDEKWEIYTLFKREKTTESKYAYHFVGYCTAYPFYCWPENTRIRISQFLVLPPYKKKGHGSKLYQTVYELFKSRLDVCEMTVEDPNEEFSDMR 287
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BLAST of mRNA_M-pyrifera_M_contig97909.22544.1 vs. uniprot
Match: G4TM52_SERID (Histone acetyltransferase type B catalytic subunit n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TM52_SERID)

HSP 1 Score: 102 bits (253), Expect = 4.110e-23
Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = 1 
Query:    1 VQIFVLLEIDGGTYIEARDPRWEFYGLFEHRRRASGEESYRCIGYCTAYRFYSLKHSFRLRISQFLLLAPHQKRGHGRRLLSAIYEHA-RARGVRDIPVEDPAPEFMRLR 327
            +QIF+LL I+ G+YIE  D +WEF  LFE R+R  G+E Y  +GY + Y FY    S RLR+SQF++L P+QK+GHG  L  AI+    R+    ++ VEDP+ +F  LR
Sbjct:  191 MQIFILLYIEAGSYIEEDDDKWEFVTLFEKRKRKDGKEVYHFVGYSSLYPFYFYPESTRLRLSQFVILGPYQKKGHGAALYKAIHNFVLRSPRFAELTVEDPSEDFEDLR 300
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BLAST of mRNA_M-pyrifera_M_contig97909.22544.1 vs. uniprot
Match: A0A0J0XLH0_9TREE (Histone acetyltransferase type B catalytic subunit n=1 Tax=Cutaneotrichosporon oleaginosum TaxID=879819 RepID=A0A0J0XLH0_9TREE)

HSP 1 Score: 100 bits (249), Expect = 9.650e-23
Identity = 50/110 (45.45%), Postives = 74/110 (67.27%), Query Frame = 1 
Query:    1 VQIFVLLEIDGGTYIEARDPRWEFYGLFEHRRRASGEESYRCIGYCTAYRFYSLKHSFRLRISQFLLLAPHQKRGHGRRLLSAIYEHARAR-GVRDIPVEDPAPEFMRLR 327
            +Q+FVLL I+GG+YI+  +  WEF+ LFE R+R +G  S+  +GY + Y F+      RLR+SQF++L P+Q  GHG RL SA++++  +R  V ++ VEDPA  F  LR
Sbjct:  180 MQVFVLLYIEGGSYIQEDEDAWEFFTLFERRKRPAGGYSFHFVGYTSVYPFWHYPDQIRLRLSQFVILPPYQHLGHGSRLYSALFDYMLSRPDVAELTVEDPAEAFEDLR 289
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BLAST of mRNA_M-pyrifera_M_contig97909.22544.1 vs. uniprot
Match: A0A1M2VI51_TRAPU (Histone acetyltransferase type B catalytic subunit n=2 Tax=Trametes TaxID=5324 RepID=A0A1M2VI51_TRAPU)

HSP 1 Score: 99.4 bits (246), Expect = 3.150e-22
Identity = 54/112 (48.21%), Postives = 71/112 (63.39%), Query Frame = 1 
Query:    1 VQIFVLLEIDGGTYIEARDPRWEFYGLFEHRRRASGEE--SYRCIGYCTAYRFYSLKHSFRLRISQFLLLAPHQKRGHGRRLLSAIYEHARAR-GVRDIPVEDPAPEFMRLR 327
            +Q+FVLL I+GG+YI   +  WEF  L+E RRR S  +  +Y  +GY T Y FY      RLRISQFL+L P+Q+ GHG  L +AIY+H  A   + ++ VEDPA  F  LR
Sbjct:  182 MQLFVLLYIEGGSYISETEDTWEFAVLYEKRRRRSAPDVTTYHFVGYSTLYPFYCFPERVRLRISQFLILPPYQQDGHGSALYTAIYQHVLASPSIAELTVEDPAEAFEDLR 293
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BLAST of mRNA_M-pyrifera_M_contig97909.22544.1 vs. uniprot
Match: A0A8I2YVI3_9AGAM (Histone acetyltransferase type B catalytic subunit n=1 Tax=Boletus reticuloceps TaxID=495285 RepID=A0A8I2YVI3_9AGAM)

HSP 1 Score: 99.0 bits (245), Expect = 3.990e-22
Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = 1 
Query:    1 VQIFVLLEIDGGTYIEARDPRWEFYGLFEHRRRASGEESYRCIGYCTAYRFYSLKHSFRLRISQFLLLAPHQKRGHGRRLLSAIYEHARAR-GVRDIPVEDPAPEFMRLR 327
            +QIF+LL I+ G+YI   +  W+F  LFE R+R  G  +Y  +GY + Y FY      RLR+SQF++L P+Q++GHG  L +AIY    ++ GV ++ VEDPA  F  LR
Sbjct:  165 MQIFILLYIEAGSYINEEEDGWDFVVLFEKRKRKDGTATYHFVGYSSLYNFYCFPEKVRLRLSQFVILPPYQRQGHGSELYTAIYNFVLSQAGVSELTVEDPAEAFEDLR 274
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BLAST of mRNA_M-pyrifera_M_contig97909.22544.1 vs. uniprot
Match: UPI001B8601E9 (acyl-CoA N-acyltransferase n=1 Tax=Suillus paluster TaxID=48578 RepID=UPI001B8601E9)

HSP 1 Score: 99.0 bits (245), Expect = 4.140e-22
Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = 1 
Query:    1 VQIFVLLEIDGGTYIEARDPRWEFYGLFEHRRRASGEESYRCIGYCTAYRFYSLKHSFRLRISQFLLLAPHQKRGHGRRLLSAIYEHARAR-GVRDIPVEDPAPEFMRLR 327
            +QIF+LL I+ G+YI   D  W+F  L+E R+R +G E+Y  IGY + Y FY      R+R+SQF+++ P+Q++GHG  L  AIY    +R  V ++ VEDPA  F  LR
Sbjct:  170 MQIFILLYIEAGSYINEDDDAWDFVVLYEKRKRQNGTETYHFIGYSSLYNFYCFPEKLRMRLSQFVIVPPYQRQGHGSELYRAIYNFVLSRPSVSELTVEDPAEAFEDLR 279
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BLAST of mRNA_M-pyrifera_M_contig97909.22544.1 vs. uniprot
Match: A0A367J6P3_RHIAZ (Histone acetyltransferase type B catalytic subunit n=4 Tax=Rhizopus TaxID=4842 RepID=A0A367J6P3_RHIAZ)

HSP 1 Score: 98.6 bits (244), Expect = 4.200e-22
Identity = 52/110 (47.27%), Postives = 74/110 (67.27%), Query Frame = 1 
Query:    1 VQIFVLLEIDGGTYIEARDPRWEFYGLFEHRRRASGEESYRCIGYCTAYRFYSLKHSFRLRISQFLLLAPHQKRGHGRRLLSAIYEHARARG-VRDIPVEDPAPEFMRLR 327
            +Q+FVLL I+GG+YIE  D +WE Y +F+ +  A    SY  +GYCTAY FY    + R+RISQFL+L P++K+GHG  L   +Y+  ++R  V +I VEDP+ EF  +R
Sbjct:  174 MQLFVLLFIEGGSYIEDDDEKWEIYTIFK-KEGAHSLASYHFVGYCTAYPFYFWPENTRMRISQFLVLPPYKKKGHGSELYRILYQLFKSRQEVSEITVEDPSEEFADMR 282
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BLAST of mRNA_M-pyrifera_M_contig97909.22544.1 vs. uniprot
Match: A0A8H7L055_9AGAM (Histone acetyltransferase type B catalytic subunit n=1 Tax=Athelia sp. TMB TaxID=2748771 RepID=A0A8H7L055_9AGAM)

HSP 1 Score: 97.8 bits (242), Expect = 7.560e-22
Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 1 
Query:    1 VQIFVLLEIDGGTYIEARDPRWEFYGLFEHRRRAS--GEESYRCIGYCTAYRFYSLKHSFRLRISQFLLLAPHQKRGHGRRLLSAIYEHARAR-GVRDIPVEDPAPEFMRLR 327
            +Q+F+LL I+ G+YI   + +WEF  LFE R+R    G E+Y  +GY + Y FY      R+R+SQF++L P+Q+ GHG  L +AIY H  +R  + ++ VEDPA  F  LR
Sbjct:  126 MQLFILLYIEAGSYISEEEDQWEFVTLFEKRKRRDTPGVETYHFVGYSSLYNFYCFPEKVRMRLSQFVILPPYQRHGHGSELYNAIYVHVLSRPDIAELTVEDPAEAFEDLR 237
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BLAST of mRNA_M-pyrifera_M_contig97909.22544.1 vs. uniprot
Match: A0A060S3M0_PYCCI (Histone acetyltransferase type B catalytic subunit n=2 Tax=Trametes TaxID=5324 RepID=A0A060S3M0_PYCCI)

HSP 1 Score: 98.2 bits (243), Expect = 8.300e-22
Identity = 53/112 (47.32%), Postives = 70/112 (62.50%), Query Frame = 1 
Query:    1 VQIFVLLEIDGGTYIEARDPRWEFYGLFEHRRRASGEE--SYRCIGYCTAYRFYSLKHSFRLRISQFLLLAPHQKRGHGRRLLSAIYEHARAR-GVRDIPVEDPAPEFMRLR 327
            +Q+FVLL I+GG+YI   +  WEF  L+E RRR S  +  +Y  +GY T Y FY      RLRISQFL+L P+Q+ GHG  L +AIY+H      + ++ VEDPA  F  LR
Sbjct:  182 MQLFVLLYIEGGSYISESEDSWEFVVLYEKRRRRSSPDITTYHFVGYSTLYPFYCFPERVRLRISQFLILPPYQQDGHGSALYTAIYQHVLGSPSIAELTVEDPAEAFEDLR 293
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97909.22544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8HGP6_ACACA1.140e-2449.57Histone acetyltransferase n=1 Tax=Acanthamoeba cas... [more]
A0A1C7N465_9FUNG1.190e-2345.45Histone acetyltransferase type B catalytic subunit... [more]
G4TM52_SERID4.110e-2347.27Histone acetyltransferase type B catalytic subunit... [more]
A0A0J0XLH0_9TREE9.650e-2345.45Histone acetyltransferase type B catalytic subunit... [more]
A0A1M2VI51_TRAPU3.150e-2248.21Histone acetyltransferase type B catalytic subunit... [more]
A0A8I2YVI3_9AGAM3.990e-2244.55Histone acetyltransferase type B catalytic subunit... [more]
UPI001B8601E94.140e-2244.55acyl-CoA N-acyltransferase n=1 Tax=Suillus paluste... [more]
A0A367J6P3_RHIAZ4.200e-2247.27Histone acetyltransferase type B catalytic subunit... [more]
A0A8H7L055_9AGAM7.560e-2243.75Histone acetyltransferase type B catalytic subunit... [more]
A0A060S3M0_PYCCI8.300e-2247.32Histone acetyltransferase type B catalytic subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97909contigM-pyrifera_M_contig97909:209..544 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score102.4
Seed ortholog evalue1.4e-19
Seed eggNOG ortholog5217.XP_007006001.1
Preferred nameHAT1
KEGG koko:K11303
KEGG Pathwayko05034,map05034
Hectar predicted targeting categoryother localisation
GOsGO:0000123,GO:0000228,GO:0000302,GO:0000785,GO:0000790,GO:0001558,GO:0003674,GO:0003682,GO:0003824,GO:0004402,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0008080,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010485,GO:0010556,GO:0010558,GO:0010570,GO:0010605,GO:0010629,GO:0016043,GO:0016407,GO:0016410,GO:0016458,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0030308,GO:0031248,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034212,GO:0034599,GO:0034614,GO:0034641,GO:0036166,GO:0036211,GO:0040008,GO:0040029,GO:0042221,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043967,GO:0043981,GO:0043982,GO:0043983,GO:0043995,GO:0043996,GO:0043997,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045814,GO:0045892,GO:0045926,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051716,GO:0060255,GO:0060258,GO:0061733,GO:0065007,GO:0070013,GO:0070784,GO:0070785,GO:0070887,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:1900428,GO:1900429,GO:1901360,GO:1901564,GO:1901700,GO:1901701,GO:1902493,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990234,GO:2000112,GO:2000113,GO:2000220,GO:2000221,GO:2001141
EggNOG free text desc.Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair
EggNOG OGs38YSJ@33154,3NWPI@4751,3V03R@5204,3VDY9@5234,KOG2696@1,KOG2696@2759
EC2.3.1.48
COG Functional cat.B
Best tax levelTremellales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons1
Model size336
Cds size336
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816896.1383905-CDS-M-pyrifera_M_contig97909:208..5441622816896.1383905-CDS-M-pyrifera_M_contig97909:208..544Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97909 209..544 +
1692278242.2210524-CDS-M-pyrifera_M_contig97909:208..5441692278242.2210524-CDS-M-pyrifera_M_contig97909:208..544Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97909 209..544 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97909.22544.1prot_M-pyrifera_M_contig97909.22544.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97909 209..544 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97909.22544.1

>prot_M-pyrifera_M_contig97909.22544.1 ID=prot_M-pyrifera_M_contig97909.22544.1|Name=mRNA_M-pyrifera_M_contig97909.22544.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
VQIFVLLEIDGGTYIEARDPRWEFYGLFEHRRRASGEESYRCIGYCTAYR
FYSLKHSFRLRISQFLLLAPHQKRGHGRRLLSAIYEHARARGVRDIPVED
PAPEFMRLRGLS
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mRNA from alignment at M-pyrifera_M_contig97909:209..544+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97909.22544.1 ID=mRNA_M-pyrifera_M_contig97909.22544.1|Name=mRNA_M-pyrifera_M_contig97909.22544.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig97909:209..544+ (Macrocystis pyrifera P11B4 male)
GTGCAGATCTTTGTGCTGCTGGAAATCGATGGCGGAACGTACATAGAGGC
GCGCGACCCAAGGTGGGAGTTCTATGGCCTCTTCGAACACCGGCGGCGGG
CGAGCGGCGAGGAGAGCTACCGCTGCATCGGCTACTGCACAGCTTACCGC
TTCTACTCCCTCAAGCACAGCTTTCGCCTGCGCATCAGCCAGTTTCTGCT
GCTGGCGCCCCACCAGAAGAGGGGCCACGGCCGCCGCCTCCTCTCGGCCA
TCTACGAACACGCACGCGCGCGTGGCGTACGCGACATCCCCGTCGAGGAC
CCTGCGCCCGAATTCATGCGCCTCAGAGGTCTCTCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97909:209..544+

>mRNA_M-pyrifera_M_contig97909.22544.1 ID=mRNA_M-pyrifera_M_contig97909.22544.1|Name=mRNA_M-pyrifera_M_contig97909.22544.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig97909:209..544+ (Macrocystis pyrifera P11B4 male)
GTGCAGATCTTTGTGCTGCTGGAAATCGATGGCGGAACGTACATAGAGGC
GCGCGACCCAAGGTGGGAGTTCTATGGCCTCTTCGAACACCGGCGGCGGG
CGAGCGGCGAGGAGAGCTACCGCTGCATCGGCTACTGCACAGCTTACCGC
TTCTACTCCCTCAAGCACAGCTTTCGCCTGCGCATCAGCCAGTTTCTGCT
GCTGGCGCCCCACCAGAAGAGGGGCCACGGCCGCCGCCTCCTCTCGGCCA
TCTACGAACACGCACGCGCGCGTGGCGTACGCGACATCCCCGTCGAGGAC
CCTGCGCCCGAATTCATGCGCCTCAGAGGTCTCTCTGTGCAGATCTTTGT
GCTGCTGGAAATCGATGGCGGAACGTACATAGAGGCGCGCGACCCAAGGT
GGGAGTTCTATGGCCTCTTCGAACACCGGCGGCGGGCGAGCGGCGAGGAG
AGCTACCGCTGCATCGGCTACTGCACAGCTTACCGCTTCTACTCCCTCAA
GCACAGCTTTCGCCTGCGCATCAGCCAGTTTCTGCTGCTGGCGCCCCACC
AGAAGAGGGGCCACGGCCGCCGCCTCCTCTCGGCCATCTACGAACACGCA
CGCGCGCGTGGCGTACGCGACATCCCCGTCGAGGACCCTGCGCCCGAATT
CATGCGCCTCAGAGGTCTCTCT
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