mRNA_M-pyrifera_M_contig97902.22541.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97902.22541.1 vs. uniprot
Match: UPI001ED87FDF (rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED87FDF) HSP 1 Score: 61.6 bits (148), Expect = 2.380e-9 Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 58 RGRLSARMEAEGNLWRETWAATAPLPARAQVRLFKHETEAEKALHYLETIAPSAL 222
+G LS RM GN W+E W+A P+PAR Q RLF EAEK LH+LET++ S +
Sbjct: 762 KGHLSERMLLPGNKWQEVWSAAKPVPARRQKRLFNDGCEAEKVLHFLETLSVSKI 816
BLAST of mRNA_M-pyrifera_M_contig97902.22541.1 vs. uniprot
Match: A0A2G5CC03_AQUCA (Rab3 GTPase-activating protein catalytic subunit n=2 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5CC03_AQUCA) HSP 1 Score: 60.8 bits (146), Expect = 4.390e-9 Identity = 29/58 (50.00%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 49 VSERGRLSARMEAEGNLWRETWAATAPLPARAQVRLFKHETEAEKALHYLETIAPSAL 222
S+RG+LS+RM+ EGNLWRE W + PLPA Q+ LF + E L++LE I P L
Sbjct: 485 ASKRGQLSSRMQKEGNLWRELWETSKPLPAVKQIPLFDEDLAVEGILNFLEEITPFEL 542
BLAST of mRNA_M-pyrifera_M_contig97902.22541.1 vs. uniprot
Match: A0A7N0UW69_KALFE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UW69_KALFE) HSP 1 Score: 60.5 bits (145), Expect = 5.940e-9 Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 46 VVSERGRLSARMEAEGNLWRETWAATAPLPARAQVRLFKHETEAEKALHYLETIAPSAL 222
V S +G+LS+RM+ EGNLWRE W + P+PA Q LF + E L+ LE APSAL
Sbjct: 307 VESAKGQLSSRMQKEGNLWRELWETSKPVPAYKQAPLFDEDLAVEGILNQLEDTAPSAL 365
BLAST of mRNA_M-pyrifera_M_contig97902.22541.1 vs. uniprot
Match: A0A200QG39_9MAGN (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QG39_9MAGN) HSP 1 Score: 60.5 bits (145), Expect = 6.010e-9 Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 46 VVSERGRLSARMEAEGNLWRETWAATAPLPARAQVRLFKHETEAEKALHYLETIAPSAL 222
S+RG LS RM+ EGNLWRE W + PLPA Q LF + E L++LE I PS L
Sbjct: 464 ATSKRGFLSTRMQKEGNLWRELWETSKPLPAVKQTPLFDEDLAVEGILNFLEDITPSEL 522
BLAST of mRNA_M-pyrifera_M_contig97902.22541.1 vs. uniprot
Match: UPI001C4F8F36 (rab3 GTPase-activating protein catalytic subunit isoform X1 n=2 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F8F36) HSP 1 Score: 60.1 bits (144), Expect = 8.210e-9 Identity = 30/57 (52.63%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 52 SERGRLSARMEAEGNLWRETWAATAPLPARAQVRLFKHETEAEKALHYLETIAPSAL 222
S RG+LS+RM+ EGNLWRE W + PLPA Q LF + E L+ LE I PS L
Sbjct: 480 SRRGQLSSRMQKEGNLWRELWETSKPLPAVKQAPLFDEDLAVESILNILEDIPPSEL 536
BLAST of mRNA_M-pyrifera_M_contig97902.22541.1 vs. uniprot
Match: A0A8B8PRT3_9MYRT (Rab3 GTPase-activating protein catalytic subunit n=15 Tax=Myrtoideae TaxID=1699513 RepID=A0A8B8PRT3_9MYRT) HSP 1 Score: 58.9 bits (141), Expect = 2.120e-8 Identity = 31/55 (56.36%), Postives = 32/55 (58.18%), Query Frame = 1
Query: 58 RGRLSARMEAEGNLWRETWAATAPLPARAQVRLFKHETEAEKALHYLETIAPSAL 222
RGRLS RM GNLWR+ W LPA Q L EAEK LHYLETI P L
Sbjct: 683 RGRLSQRMSERGNLWRKIWNDAPSLPASEQKPLLDPHREAEKILHYLETIRPHQL 737
BLAST of mRNA_M-pyrifera_M_contig97902.22541.1 vs. uniprot
Match: A0A5C7IET0_9ROSI (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7IET0_9ROSI) HSP 1 Score: 58.5 bits (140), Expect = 2.860e-8 Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 58 RGRLSARMEAEGNLWRETWAATAPLPARAQVRLFKHETEAEKALHYLETIAPSAL 222
+G+LS RM+ EGNLWRE W + P+PA QV LF + E L++LE I PS L
Sbjct: 469 KGQLSTRMQKEGNLWRELWETSKPVPAVKQVPLFDEDLAVEGILNFLEEIPPSEL 523
BLAST of mRNA_M-pyrifera_M_contig97902.22541.1 vs. uniprot
Match: A0A5P1FB21_ASPOF (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FB21_ASPOF) HSP 1 Score: 58.5 bits (140), Expect = 2.860e-8 Identity = 30/57 (52.63%), Postives = 35/57 (61.40%), Query Frame = 1
Query: 52 SERGRLSARMEAEGNLWRETWAATAPLPARAQVRLFKHETEAEKALHYLETIAPSAL 222
S RGRLSARM+ EGNLWRE W + PLPA QV L+ + + L LE I P L
Sbjct: 445 SRRGRLSARMQKEGNLWRELWESAKPLPAIKQVPLYDEDLAVDSILTTLEDIQPREL 501
BLAST of mRNA_M-pyrifera_M_contig97902.22541.1 vs. uniprot
Match: A0A7C9ESW7_OPUST (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ESW7_OPUST) HSP 1 Score: 58.5 bits (140), Expect = 2.870e-8 Identity = 29/58 (50.00%), Postives = 35/58 (60.34%), Query Frame = 1
Query: 49 VSERGRLSARMEAEGNLWRETWAATAPLPARAQVRLFKHETEAEKALHYLETIAPSAL 222
S RGRLS+RM+ EGNLWRE W P+PA Q +F + E L LE I+PS L
Sbjct: 472 TSSRGRLSSRMQKEGNLWRELWETAKPVPAVRQAPIFDEDLTVEGVLTTLEEISPSEL 529
BLAST of mRNA_M-pyrifera_M_contig97902.22541.1 vs. uniprot
Match: A0A8J5ENV3_ZINOF (Rab3 GTPase-activating protein catalytic subunit n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5ENV3_ZINOF) HSP 1 Score: 58.2 bits (139), Expect = 3.960e-8 Identity = 29/55 (52.73%), Postives = 33/55 (60.00%), Query Frame = 1
Query: 58 RGRLSARMEAEGNLWRETWAATAPLPARAQVRLFKHETEAEKALHYLETIAPSAL 222
RG+LS RM GNLWR+ W A+ PLP Q L E EK LHYLET+ P L
Sbjct: 745 RGKLSQRMSEHGNLWRQIWNASPPLPISEQKPLLDPIREGEKILHYLETLKPYQL 799 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97902.22541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97902.22541.1 >prot_M-pyrifera_M_contig97902.22541.1 ID=prot_M-pyrifera_M_contig97902.22541.1|Name=mRNA_M-pyrifera_M_contig97902.22541.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp SERRQETECEGARKAVVSERGRLSARMEAEGNLWRETWAATAPLPARAQVback to top mRNA from alignment at M-pyrifera_M_contig97902:253..474- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97902.22541.1 ID=mRNA_M-pyrifera_M_contig97902.22541.1|Name=mRNA_M-pyrifera_M_contig97902.22541.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=222bp|location=Sequence derived from alignment at M-pyrifera_M_contig97902:253..474- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97902:253..474- >mRNA_M-pyrifera_M_contig97902.22541.1 ID=mRNA_M-pyrifera_M_contig97902.22541.1|Name=mRNA_M-pyrifera_M_contig97902.22541.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig97902:253..474- (Macrocystis pyrifera P11B4 male)back to top |