mRNA_M-pyrifera_M_contig97893.22532.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97893.22532.1 vs. uniprot
Match: A0A7S4KVL7_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KVL7_9EUKA) HSP 1 Score: 186 bits (471), Expect = 6.400e-54 Identity = 95/223 (42.60%), Postives = 136/223 (60.99%), Query Frame = 1
Query: 1 NMRTATLLIGCALVAFAVAQ---IPDGFSTFFQSATCPDGWEEAVDCKGRLLVSVTNPTDGGITVGDALADQEDRLHSHAYSATLDLPYKEISADDCCNSQGACAGTYTPTGNSSLAPSGLPFSQLIFCTIANATVSGGVPFGTIGYFLPTA--TTGSSCPSAWEPLDEAAGRILVPGYDDVGLISSDTAPLSSGEDRTHKHSFSCPITTDSVEYAGIAGCCN 654
NM+ + IG A+V + IP G + +F+S TCPDGW+E KGRL+VSV++ GG+TV DALA+ EDR HSH + + L K +SA CCN GAC GTY G+++ SG+PF QL+ C+ + + + +P+GTI +F T + S P W+ ++ GR ++PGY GL +S +A L+S EDR H+H F+ I + EYAGI GCC+
Sbjct: 3 NMK---VFIGLAVVFLFLGTTHGIPQGIAHWFRSTTCPDGWQEFASTKGRLIVSVSDGMLGGLTVNDALANLEDRTHSHEIESQVTLDTKSVSAIGCCNPDGACHGTYPLNGSTTNDASGMPFVQLVLCSFSGPSTTDPIPYGTIAFFDSTVGYDSCSDIPGNWQVIESVVGRSIIPGYS-TGLFTSTSAALTSQEDRPHQHVFTATINPNDQEYAGITGCCD 221
BLAST of mRNA_M-pyrifera_M_contig97893.22532.1 vs. uniprot
Match: A0A5A8E413_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E413_CAFRO) HSP 1 Score: 141 bits (356), Expect = 1.010e-36 Identity = 84/224 (37.50%), Postives = 113/224 (50.45%), Query Frame = 1
Query: 4 MRTATLLIGCALVAFAVA----QIPDGFSTFFQSATCPDGWEEAVDCKGRLLVSVTNPTDGGITVGDALADQEDRLHSHAYSATLDLPYKEISADDCCNSQGACAGTYTPTGNSSLAPSGLPFSQLIFCTIANATVSGGVPFGTIGYFLPTATTGSSCPSAWEPLDEAAGRILVPGYDDVGLISSDTAPLSSGEDRTHKHSFS---CPITTDSVEYAGIAGCCN 654
M+T T+ I A A +P G + FF+ CPDGW GR++VSVTN T GG T+ AL+DQE R HSH A L K +S D + A G ++ + +GL F QL C A + +P G +F P SCP+ ++PL +AAGRIL P +D + + SD+ PL EDR H H C I T + ++ GI GCCN
Sbjct: 1 MQTLTVFIAAAGALLAATPSAGSVPAGTALFFEQG-CPDGWIREPLSAGRMIVSVTNGTRGGFTIHQALSDQEVRTHSHQSLAVTSLATKSVSGVDGSDHSAAAHGAQHGANATAASAAGLGFVQLPLCVAVTALPNATLPAGAAAFFGPDTF---SCPAGFDPLADAAGRILTPAHD-LQITKSDSLPLGDQEDRLHSHPTDNGRCAINTQATDFEGIGGCCN 219
BLAST of mRNA_M-pyrifera_M_contig97893.22532.1 vs. uniprot
Match: A0A6N7PYM4_9DELT (Uncharacterized protein n=1 Tax=Polyangium spumosum TaxID=889282 RepID=A0A6N7PYM4_9DELT) HSP 1 Score: 93.6 bits (231), Expect = 1.940e-19 Identity = 64/201 (31.84%), Postives = 93/201 (46.27%), Query Frame = 1
Query: 61 IPDGFSTFFQSATCPDGWEEAVDCKGRLLVSVTNPTDGGITVGDALADQEDRLHSHAYSATLDLP-YKEISADDCCNSQGACAGTYTPTGNSSLAPSGLPFSQLIFCTIANATVSGGVPFGT-IGYFLPTATTGSSCPSAWEPLDEAAGRILV--PGYDDVGLISSDTAPLSSGEDRTHKHSFSCPITTDSVEYAGIAGCC 651
+P G +FF+ CP+GW+ GR +V+ + G T+G+ LA QE+R HSHA SA++D+P + A N+ AG T S A + +P+ QL+ C V P + F SCP+ W+P + AGR+LV P Y P +S R H H+F+ + T S GCC
Sbjct: 46 LPTGAVSFFKKLACPEGWKPYESAAGRTIVAASEALPSGQTLGEPLASQEERTHSHALSASVDVPSVSYVGAPGGGNAGVGKAGAVTFVAASEPASAEVPYVQLLACKKNAEPVPRVTPLPPRLLMFFEL----ESCPAGWKPAEGTAGRLLVGLPQYAPADRPFGGE-PFTSPALRAHGHAFTSTLETPSHGIGLAGGCC 241
BLAST of mRNA_M-pyrifera_M_contig97893.22532.1 vs. uniprot
Match: A0A4U1IY49_9DELT (Uncharacterized protein n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1IY49_9DELT) HSP 1 Score: 91.7 bits (226), Expect = 9.850e-19 Identity = 63/206 (30.58%), Postives = 93/206 (45.15%), Query Frame = 1
Query: 61 IPDGFSTFFQSATCPDGWEEAVDCKGRLLVSVTNPTDGGITVGDALADQEDRLHSHAYSATLDLP-YKEISADDCCNSQGACAGTYTPTGNSSLAPSGLPFSQLIFCTIANATVSGGVPFGT-IGYFLPTATTGSSCPSAWEPLDEAAGRILVPGYDDVGLISSDTA-------PLSSGEDRTHKHSFSCPITTDSVEYAGIAGCC 651
+P G +FF+ CP+GW+ GR +V+ + G VG+ L+ QE+R HSHA A++++P + A NS AG + S A + P+ QL+ C +V P + + F CP W+P + AGR+L VGL A P +S E R+H H+FS + T S GCC
Sbjct: 44 LPTGAVSFFKKLACPEGWKPYEPAVGRTIVAASETLPSGEVVGEPLSSQEEREHSHALGASVEIPAVSYVGAPGGGNSGVGQAGAVSFATTSEPASADTPYVQLLACKKHEESVPRPTPLPSRMLMFFDL----EKCPEGWKPAEGTAGRLL------VGLPKDAPADQTFGGDPFTSPELRSHGHAFSSAVETPSHGIGLAGGCC 239
BLAST of mRNA_M-pyrifera_M_contig97893.22532.1 vs. uniprot
Match: A0A7S1LVI3_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1LVI3_NEODS) HSP 1 Score: 82.0 bits (201), Expect = 2.920e-15 Identity = 41/90 (45.56%), Postives = 54/90 (60.00%), Query Frame = 1
Query: 388 NAT-VSGGVPFGTIGYFLPTATTGSSCPSAWEPLDEAAGRILVPGYDDVGLISSDTAPLSSGEDRTHKHSFSCPITTDSVEYAGIAGCCN 654
NAT VS G FGT+ +F +CP+ W GR LVPG+ G +S++ PL SGEDR H H++ TTDSV +AG+AGCC+
Sbjct: 1 NATNVSTG--FGTVAHFTSDV---DACPTGWTAAAGYTGRFLVPGFGSGGAVSNEAPPLESGEDRAHSHNYDTTFTTDSVSFAGVAGCCD 85
BLAST of mRNA_M-pyrifera_M_contig97893.22532.1 vs. uniprot
Match: A0A6J4XB40_9DELT (Uncharacterized protein n=1 Tax=Olavius sp. associated proteobacterium Delta 1 TaxID=698986 RepID=A0A6J4XB40_9DELT) HSP 1 Score: 65.1 bits (157), Expect = 9.080e-9 Identity = 49/161 (30.43%), Postives = 75/161 (46.58%), Query Frame = 1
Query: 64 PDGFSTFF-QSATCPDGWEEAVDCKGRLLVSVTNPTDGGITVGDALADQEDRL--HSHAYSATLDLPYKEISA-DDCCNSQGACAGTYTPTGNSSLAPSGLPFSQLIFC-TIANA-----TVSGGVPFGTIGYFLPTATTGSSCPSAWEPLDEAAGRILVP 516
P G FF Q+ TCP+GW+E + KGR+++ P G DA E +L H H Y + +K+I+A N G+++ +G + + LP QL C + AN+ +V P+ T+ +F SCP W P + GR +VP
Sbjct: 30 PSGMVAFFMQNDTCPNGWQEMEEAKGRMILGTITPALLG-EKSDAPVLVEGQLPKHDHDYKVSGSWGHKDINAAHGGGNKHATKKGSHSGSGTTEKSTWELPLMQLKVCQSKANSNSQKESVVDAFPYSTVAFF-----NRQSCPVGWVPFKDMDGRFVVP 184 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97893.22532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97893.22532.1 >prot_M-pyrifera_M_contig97893.22532.1 ID=prot_M-pyrifera_M_contig97893.22532.1|Name=mRNA_M-pyrifera_M_contig97893.22532.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp MRTATLLIGCALVAFAVAQIPDGFSTFFQSATCPDGWEEAVDCKGRLLVSback to top mRNA from alignment at M-pyrifera_M_contig97893:52..705+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97893.22532.1 ID=mRNA_M-pyrifera_M_contig97893.22532.1|Name=mRNA_M-pyrifera_M_contig97893.22532.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig97893:52..705+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97893:52..705+ >mRNA_M-pyrifera_M_contig97893.22532.1 ID=mRNA_M-pyrifera_M_contig97893.22532.1|Name=mRNA_M-pyrifera_M_contig97893.22532.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig97893:52..705+ (Macrocystis pyrifera P11B4 male)back to top |