mRNA_M-pyrifera_M_contig9783.22529.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9783.22529.1
Unique NamemRNA_M-pyrifera_M_contig9783.22529.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig9783.22529.1 vs. uniprot
Match: D8LRP7_ECTSI (CCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP7_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 8.840e-81
Identity = 328/624 (52.56%), Postives = 355/624 (56.89%), Query Frame = 1 
Query:    1 ALMEEGLLDRRDSLDLLENLDFGIMDIGMSDGEPDI----------PTRDGAVEHS--------TLPPGGAGKGPRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRDSVALCGETSDHFDIGDMAFDATFEHEYAEQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGALGTAVGPLRVSRSGGAXXXXXXXXXXXXXXTALADEAGHGXXXXXXXXXXAHGDADEPELGSFETLGAAIGDFCPQFKFSFTDDVHLDLGCGLKAELRDLESFSEALPGQHGKGGEGDLMGLGAGGLTGVPSHSPTPAQQLLSRSGP-VIKPELMMMPVSPRMGTTRSGTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGPGVGELGGGMYGRDGTGGVGGGTGHHAARGRPVVSGMGIMVRGGPRNGVAGSGAGEDGEERKFVGAYSPEARRQRIDRFLQKRERRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMACA 1815
            ALME GLLDRR+S DLL+NLDFGIM++GMSD EP            P  DG  EH         T+PP        A                                                  XXXXXXXXXXXXXXXXXX     S  + V L GE S  FDIG+MAFDATF+H+Y EQE               XXXXXXXXXXXXXXXXX                  L T V P    RS G                 ++D+ G G           HGDAD P LGSF T+GA IGDF PQFKFSFTDD+HLDLG GLK ELRDLESFSE  P  HG+GGE  ++ L A           + AQQLLSR GP V+K E++    S ++G TRSGTA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXX                 XXXXXXXXXXXXXXXX                   GGV      HA RGRPVVSGMGIMV GGPR G+   GAG DGE+ KFVGAYSPEARRQRI+RFL KRE+RVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMACA
Sbjct:  121 ALMENGLLDRRESFDLLDNLDFGIMELGMSDEEPSSHSGAESAAVEPVPDGPDEHEAQAGSSKPTVPPPPLPTTASAATDKAAVMTGVKTRAFRNSGASEEGGPAPASSVGGGEKVSTQEGGDGVQGXXXXXXXXXXXXXXXXXXNGAQDSEHE-VDLAGEGSGQFDIGEMAFDATFDHDYGEQEDDDVDMKDGSGQLPSXXXXXXXXXXXXXXXXXVSTAVGPLRVVGSTSKTKLSTRVPPNDAERSEGGGGSHAGCSRETGPGVVMSDDEGGGRE--------GHGDADAPGLGSFSTMGAVIGDFSPQFKFSFTDDIHLDLGGGLKDELRDLESFSEHGPDPHGRGGE--MLALSA-----------SRAQQLLSRGGPAVVKSEVLSTSPS-QLGATRSGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSTNHYASXXXXXXXXXXXGAGPSSPVSVQTRPHGSXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXGGV--TPTPHAPRGRPVVSGMGIMVGGGPRVGMGAGGAGADGEK-KFVGAYSPEARRQRIERFLDKREKRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMACA 715
[Close]
BLAST of mRNA_M-pyrifera_M_contig9783.22529.1 vs. uniprot
Match: A0A6H5L5R7_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5R7_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 7.480e-66
Identity = 318/710 (44.79%), Postives = 348/710 (49.01%), Query Frame = 1 
Query:    7 MEEGLLDRRDSLDLLENLDFGIMDIGMSDGEPDI----------PTRDGAVEHS--------TLPPGGAGKGPRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--------------------------------SRDSVALCGETSDHFDIGDMAFDATFEHEYAEQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGALGTAVGPLRVS------------------RSGG-------AXXXXXXXXXXXXXXTALADEAGHGXXXXXXXXXXA-------------HGDADEPELGSFETLGAAIGDFCPQFKFSFTDDVHLDLGCGLKAELRDLESFSEALPGQHGKGGEGDLMGLGAGGLTGVPSHSPTPAQQLLSRSGP-VIKPELMMMPVSPRMGTTRSGTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGPGVGELG------------------GGMYGRDGTGGVGGGTGHHAARGRPVVSGMGIMVRGGPRNGVAGSGAGEDGEERKFVGAYSPEARRQRIDRFLQKRERRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMACA 1815
            ME GLLDRR+S DLL+NLDFGIM++GMSD EP            P  DG  +H         T+PP      P  P          X   XXXXXXXXXXXXXXXXXXXXXX                                    +                                S   V L G+ S  FDIG+MAFDATF+H+Y EQE               XXXXXXXXXXXXXXXXX                  L T V P  +S                  R+GG       +XXXXXXXXXXXXX  A   E G G                        HGD D P LGSF T+GA IGDF PQFKFSFTDD+HLDLG GLK ELRDLESFSE  P  HG+GGE  ++ L A           + AQQLLSR GP V+K E +    S ++G TRSGTAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                     XX                            GG+               HAARGRPVVSGMGIMV GGPR G+   GAG DGE+ KFVGAYSPEARRQRI+RFL+KRE+RVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMACA
Sbjct:    1 MENGLLDRRESFDLLDNLDFGIMELGMSDEEPSNHSGAESAAVEPVPDGPDQHKAQAGSSKPTVPP------PPLPTTASAATVKAXERGXXXXXXXXXXXXXXXXXXXXXXAVVTTGVITRAFRNSGGSEEGGPAPGSSVGGGEKVSTQEGGDGVQGGGVAMRSXXXXXXXXXXXNGAQDSEHEVDLAGDGSGQFDIGEMAFDATFDHDYGEQEDDDVDMKDGSGQLPSXXXXXXXXXXXXXXXXXVSTAVGPLRVVGSTSKNKLSTRVPPKLISSRGPHRHDXXXXXXXXXGRTGGEIDVGDQSXXXXXXXXXXXXXSDAERPEGGGGSHAGSGETGPGVVMSDDEGGGREGHGDPDAPGLGSFSTMGAVIGDFSPQFKFSFTDDIHLDLGGGLKDELRDLESFSEHGPDPHGRGGE--MLALSA-----------SRAQQLLSRGGPAVVKSEALSTSPS-QLGATRSGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFSTNHYASGAAFHGRHTGPYATAEDAAAGGEAAGAGPSSPVSVQTRPHGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVTPTP-----------HAARGRPVVSGMGIMVGGGPRVGMGAGGAGADGEK-KFVGAYSPEARRQRIERFLEKREKRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMACA 678
[Close]
BLAST of mRNA_M-pyrifera_M_contig9783.22529.1 vs. uniprot
Match: A0A7S2WW68_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW68_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.200e-25
Identity = 64/95 (67.37%), Postives = 75/95 (78.95%), Query Frame = 1 
Query: 1525 RPVVSGMGIMVRGGPRNGVAGSGAGEDGEERKFVGAYSPEARRQRIDRFLQKRERRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA 1809
            RP V  +G    G P  GV G+  G D E + F+GAYSPEARR+RI RFL+KR++RVWTK VKYDVRKNFAD+RMRVKGRFVKKEDE LLRE+M+
Sbjct:  167 RPGVP-VGTATLGAPPTGVPGA-TGGDPERKHFIGAYSPEARRKRIQRFLEKRKKRVWTKKVKYDVRKNFADSRMRVKGRFVKKEDEELLRELMS 259
[Close]
BLAST of mRNA_M-pyrifera_M_contig9783.22529.1 vs. uniprot
Match: A0A835ZB50_9STRA (CCT motif-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB50_9STRA)

HSP 1 Score: 105 bits (263), Expect = 3.790e-24
Identity = 52/62 (83.87%), Postives = 59/62 (95.16%), Query Frame = 1 
Query: 1621 FVGAYSPEARRQRIDRFLQKRERRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVM 1806
             VGAYSPE+RR+R++RFL+KR+ RVWTK VKYDVRKNFADTRMRVKGRFVKK+DEALLREVM
Sbjct:    2 LVGAYSPESRRRRLERFLEKRKHRVWTKTVKYDVRKNFADTRMRVKGRFVKKDDEALLREVM 63
[Close]
BLAST of mRNA_M-pyrifera_M_contig9783.22529.1 vs. uniprot
Match: A0A7S2WWC9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWC9_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.900e-24
Identity = 64/95 (67.37%), Postives = 75/95 (78.95%), Query Frame = 1 
Query: 1525 RPVVSGMGIMVRGGPRNGVAGSGAGEDGEERKFVGAYSPEARRQRIDRFLQKRERRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA 1809
            RP V  +G    G P  GV G+  G D E + F+GAYSPEARR+RI RFL+KR++RVWTK VKYDVRKNFAD+RMRVKGRFVKKEDE LLRE+M+
Sbjct:  380 RPGVP-VGTATLGAPPTGVPGA-TGGDPERKHFIGAYSPEARRKRIQRFLEKRKKRVWTKKVKYDVRKNFADSRMRVKGRFVKKEDEELLRELMS 472
[Close]
BLAST of mRNA_M-pyrifera_M_contig9783.22529.1 vs. uniprot
Match: A0A836CR31_9STRA (CCT motif-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR31_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.190e-24
Identity = 51/63 (80.95%), Postives = 58/63 (92.06%), Query Frame = 1 
Query: 1621 FVGAYSPEARRQRIDRFLQKRERRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA 1809
             VGAYSPE+RR+R+ RF++KR  R+WTK VKYDVRKNFADTRMRVKGRFVKK+DEALLREVMA
Sbjct:    1 MVGAYSPESRRRRVQRFMEKRHHRIWTKTVKYDVRKNFADTRMRVKGRFVKKDDEALLREVMA 63
[Close]
BLAST of mRNA_M-pyrifera_M_contig9783.22529.1 vs. uniprot
Match: G5A6V8_PHYSP (CCT domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A6V8_PHYSP)

HSP 1 Score: 106 bits (264), Expect = 6.380e-22
Identity = 50/71 (70.42%), Postives = 66/71 (92.96%), Query Frame = 1 
Query: 1597 GEDGEERKFVGAYSPEARRQRIDRFLQKRERRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA 1809
            G+DG+++ FVGAYSP++RR+RI++FL KR++RVW K VKYDVRKNFAD+R+RVKGRFVKKEDE LLRE+++
Sbjct:  200 GKDGQKQNFVGAYSPDSRRKRIEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLS 270
[Close]
BLAST of mRNA_M-pyrifera_M_contig9783.22529.1 vs. uniprot
Match: D0NBT0_PHYIT (CCT domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0NBT0_PHYIT)

HSP 1 Score: 107 bits (266), Expect = 2.000e-21
Identity = 54/89 (60.67%), Postives = 71/89 (79.78%), Query Frame = 1 
Query: 1543 MGIMVRGGPRNGVAGSGAGEDGEERKFVGAYSPEARRQRIDRFLQKRERRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA 1809
            +GI    G      G   G+DG+++ FVGAYSP++RR+RI++FL KR++RVW K VKYDVRKNFAD+R+RVKGRFVKKEDE LLRE+++
Sbjct:  283 IGIPGSAGAARPFMGVDKGKDGQKQNFVGAYSPDSRRKRIEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLS 371
[Close]
BLAST of mRNA_M-pyrifera_M_contig9783.22529.1 vs. uniprot
Match: A0A067CEV7_SAPPC (CCT domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEV7_SAPPC)

HSP 1 Score: 106 bits (264), Expect = 2.940e-21
Identity = 53/79 (67.09%), Postives = 68/79 (86.08%), Query Frame = 1 
Query: 1576 GVAGSGAG-EDGEERKFVGAYSPEARRQRIDRFLQKRERRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA 1809
            G+ G G G  D E++ FVGAYSPE+RR+R+++FL KR++RVW K VKYDVRKNFAD+R+RVKGRFVKKEDE LLRE+++
Sbjct:  278 GMVGLGGGLNDSEKKAFVGAYSPESRRKRVEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLS 356
[Close]
BLAST of mRNA_M-pyrifera_M_contig9783.22529.1 vs. uniprot
Match: M4BU16_HYAAE (CCT domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BU16_HYAAE)

HSP 1 Score: 106 bits (264), Expect = 4.760e-21
Identity = 50/71 (70.42%), Postives = 66/71 (92.96%), Query Frame = 1 
Query: 1597 GEDGEERKFVGAYSPEARRQRIDRFLQKRERRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVMA 1809
            G+DG+++ FVGAYSP++RR+RI++FL KR++RVW K VKYDVRKNFAD+R+RVKGRFVKKEDE LLRE+++
Sbjct:  321 GKDGQKQNFVGAYSPDSRRKRIEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLS 391
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9783.22529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRP7_ECTSI8.840e-8152.56CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L5R7_9PHAE7.480e-6644.79CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2WW68_9STRA1.200e-2567.37Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZB50_9STRA3.790e-2483.87CCT motif-domain-containing protein (Fragment) n=1... [more]
A0A7S2WWC9_9STRA3.900e-2467.37Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836CR31_9STRA5.190e-2480.95CCT motif-domain-containing protein n=1 Tax=Tribon... [more]
G5A6V8_PHYSP6.380e-2270.42CCT domain-containing protein n=1 Tax=Phytophthora... [more]
D0NBT0_PHYIT2.000e-2160.67CCT domain-containing protein n=12 Tax=Phytophthor... [more]
A0A067CEV7_SAPPC2.940e-2167.09CCT domain-containing protein n=4 Tax=Saprolegniac... [more]
M4BU16_HYAAE4.760e-2170.42CCT domain-containing protein n=1 Tax=Hyaloperonos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9783contigM-pyrifera_M_contig9783:2997..7893 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score277.7
Seed ortholog evalue1.3e-71
Seed eggNOG ortholog2880.D8LRP7
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0009314,GO:0009416,GO:0009628,GO:0009639,GO:0009791,GO:0009889,GO:0009908,GO:0009909,GO:0009987,GO:0010017,GO:0010018,GO:0010218,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0022414,GO:0023052,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048367,GO:0048580,GO:0048608,GO:0048731,GO:0048831,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051239,GO:0051252,GO:0051716,GO:0060255,GO:0061458,GO:0065007,GO:0071214,GO:0071478,GO:0071482,GO:0071489,GO:0071490,GO:0080090,GO:0090567,GO:0104004,GO:0140110,GO:1903506,GO:2000026,GO:2000112,GO:2000241,GO:2001141
EggNOG free text desc.CCT motif
EggNOG OGs2CXHC@1,2RXHA@2759
Ec32 ortholog descriptionCCT domain domain protein
Ec32 orthologEc-12_000590.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1818
Cds size1812
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9783.22529.1prot_M-pyrifera_M_contig9783.22529.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9783 2997..7887 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816895.1493928-CDS-M-pyrifera_M_contig9783:2996..31221622816895.1493928-CDS-M-pyrifera_M_contig9783:2996..3122Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 2997..3122 -
1692278241.662061-CDS-M-pyrifera_M_contig9783:2996..31221692278241.662061-CDS-M-pyrifera_M_contig9783:2996..3122Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 2997..3122 -
1622816895.1602979-CDS-M-pyrifera_M_contig9783:3923..46821622816895.1602979-CDS-M-pyrifera_M_contig9783:3923..4682Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 3924..4682 -
1692278241.6751072-CDS-M-pyrifera_M_contig9783:3923..46821692278241.6751072-CDS-M-pyrifera_M_contig9783:3923..4682Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 3924..4682 -
1622816895.1719434-CDS-M-pyrifera_M_contig9783:5097..53071622816895.1719434-CDS-M-pyrifera_M_contig9783:5097..5307Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 5098..5307 -
1692278241.6851807-CDS-M-pyrifera_M_contig9783:5097..53071692278241.6851807-CDS-M-pyrifera_M_contig9783:5097..5307Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 5098..5307 -
1622816895.1828306-CDS-M-pyrifera_M_contig9783:5403..54371622816895.1828306-CDS-M-pyrifera_M_contig9783:5403..5437Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 5404..5437 -
1692278241.6983366-CDS-M-pyrifera_M_contig9783:5403..54371692278241.6983366-CDS-M-pyrifera_M_contig9783:5403..5437Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 5404..5437 -
1622816895.1934214-CDS-M-pyrifera_M_contig9783:5578..57661622816895.1934214-CDS-M-pyrifera_M_contig9783:5578..5766Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 5579..5766 -
1692278241.7157652-CDS-M-pyrifera_M_contig9783:5578..57661692278241.7157652-CDS-M-pyrifera_M_contig9783:5578..5766Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 5579..5766 -
1622816895.2046218-CDS-M-pyrifera_M_contig9783:6235..63191622816895.2046218-CDS-M-pyrifera_M_contig9783:6235..6319Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 6236..6319 -
1692278241.728976-CDS-M-pyrifera_M_contig9783:6235..63191692278241.728976-CDS-M-pyrifera_M_contig9783:6235..6319Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 6236..6319 -
1622816895.2156134-CDS-M-pyrifera_M_contig9783:7476..78871622816895.2156134-CDS-M-pyrifera_M_contig9783:7476..7887Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 7477..7887 -
1692278241.742409-CDS-M-pyrifera_M_contig9783:7476..78871692278241.742409-CDS-M-pyrifera_M_contig9783:7476..7887Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9783 7477..7887 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816895.2262309-UTR-M-pyrifera_M_contig9783:7887..78931622816895.2262309-UTR-M-pyrifera_M_contig9783:7887..7893Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9783 7888..7893 -
1692278241.7566047-UTR-M-pyrifera_M_contig9783:7887..78931692278241.7566047-UTR-M-pyrifera_M_contig9783:7887..7893Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9783 7888..7893 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9783.22529.1

>prot_M-pyrifera_M_contig9783.22529.1 ID=prot_M-pyrifera_M_contig9783.22529.1|Name=mRNA_M-pyrifera_M_contig9783.22529.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=604bp
MEEGLLDRRDSLDLLENLDFGIMDIGMSDGEPDIPTRDGAVEHSTLPPGG
AGKGPRAPPPLPPPPAAGEEASERAGRNSGSGAARLGAGDGAAGAAAGGG
GGENVSAQGGGGDGVQGGGVAVTSFGGGGGSSRDSVALCGETSDHFDIGD
MAFDATFEHEYAEQEEDDDEISSSSSSSSPAATAAAVAATAAAAAAAAAA
AASAASTAAALGGGALGTAVGPLRVSRSGGAGGSGGGGSRRRRARTALAD
EAGHGRHGHGHGGEGAHGDADEPELGSFETLGAAIGDFCPQFKFSFTDDV
HLDLGCGLKAELRDLESFSEALPGQHGKGGEGDLMGLGAGGLTGVPSHSP
TPAQQLLSRSGPVIKPELMMMPVSPRMGTTRSGTAAAAAAAAAAAAAEGL
DEEAVAAAAASAAASAAASAAGYSTNHYASGAAYSGRYTGPYATTSSPSG
LGSDLGLESSAVSSAAAAASGRPHGGPGVGELGGGMYGRDGTGGVGGGTG
HHAARGRPVVSGMGIMVRGGPRNGVAGSGAGEDGEERKFVGAYSPEARRQ
RIDRFLQKRERRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREVM
ACA*
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mRNA from alignment at M-pyrifera_M_contig9783:2997..7893-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9783.22529.1 ID=mRNA_M-pyrifera_M_contig9783.22529.1|Name=mRNA_M-pyrifera_M_contig9783.22529.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4897bp|location=Sequence derived from alignment at M-pyrifera_M_contig9783:2997..7893- (Macrocystis pyrifera P11B4 male)
GCTCTGATGGAGGAAGGGCTGCTCGACAGACGCGACTCGCTAGACCTCCT
GGAGAACCTAGACTTCGGGATCATGGACATCGGTATGTCGGACGGGGAGC
CGGATATACCGACTCGCGATGGCGCGGTCGAGCACAGCACCCTCCCCCCA
GGAGGAGCGGGAAAGGGGCCACGGGCGCCGCCGCCCCTACCCCCCCCCCC
CGCTGCGGGCGAGGAGGCTAGTGAGCGCGCGGGACGGAATAGCGGCAGTG
GAGCCGCTAGGCTCGGCGCTGGAGACGGGGCGGCGGGGGCGGCGGCCGGG
GGTGGGGGCGGGGAGAACGTTTCGGCGCAGGGGGGCGGTGGGGACGGGGT
ACAGGGTGGAGGGGTCGCGGTGACCTCGTTTGGCGGGGGGGGTGGATCGT
CACGCGACAGTGTCGCTGTGGGCGGGGGTGGCGGGCCGGCTGGGAGCGTG
GACCGCCAGCAGCACTTCCAGCTCCAGCAGCAGCAGCAGCACTTACAGCT
GAGGAGCGCGTGCGACGACAGCGATCACGGACTCGGGGTGAGTTTTTTTT
GTTTTTTGTTTACGTTCGGTTCGGGTTGGTTTTAGTGCTGGCTTTAGTAT
TTGCTTTGGTTTGGGTTGTGGCGCGCGTAGTCGTACGCACTGTTTTTTTT
TCTTGTCTCTTCTCGTTTCGTGGGCGAACTTCGACCATTCTATTGGGCGT
CGTATGGTATCCATGATATATATACCATGGTATGTATTACTCCCCGAATG
GTCAAATGACTCGAGGGAAGCAACAAATCAGTATACCCCATTAAGCAGAG
GCGACGGGTTGTTTTGCGAATTGATTTAGGCGTTTGATTTGCAGCGGGAG
CGGGGTGGCGAGGGGGGGAGAGGGGGAGTAGGCGGGTTCGTTTTCGCATG
CTAAGCTCGTACGAAACCTGTTTGTTGGGTATCGAGTTTGACACCGCACC
GGCAATCGCAGGAGGAAGGGAGGGAGCGGGTGTCGGACCAGCGCCTTTTC
TCCCCCGCACAAATTGAGCTTTTGCTTCGTTTGTAGTTTCTTGTGTTGAG
CAGTGGGGGGGCACTTGTCGTGCGCTAGTAATAGGGTACGGCTGTTTAGT
AGAGCAGCTACGGTCGTAGCAATGCGGGCGCGGACACGGTTCGAGCCGCG
AGTTGAGCCAGCTACGAAGCTCTTGGAGACTTTTTTTTTGTGTGTGTTTT
GGTCCTTACGCATGAAGCAGCGGGGATGGGGGCGTTCTTGACTAACTTGA
ACTACGTGAACGTATTATGCGTATCGTATTGAACAAGTATGATGATGTTT
TTGCTTGTTGTGTTGTTGTTGCTTCCCCAGGGGCAGCTCGCTGAAGTCAC
GCACGTGGCGGAATCGGGGGACGCTTGCGCGATAATAGATAATTTGCTCC
CGTTTTCTCCTCCTTCATTCCTTTCTTGCCTTCTTTCTATTTTATCATTG
TTCCCTTCTTTTCCTTCTTCCTTCCTTCCTTCCTTCCTTCCTATGTTCCT
TCCTATGCTTGTTTTTTTTTGTTTTGTTTTGTCTCGTTATTTTTCTCCTT
TTTCGGTTGTTTTTTTTCTTGTAGCTTTGCGGCGAGACCTCAGACCACTT
CGACATCGGGGACATGGCCTTCGATGCCACTTTTGAGCACGAATACGCAG
AGCAGGAGGTGAGCGGTATCGTCGCCTAGAGGCCACGACTTGGCAACGCT
GTCTGACAATCTCGTAGGCTGTCTGCTATTTTTCATTTTCTAATCCTGTT
GGGTCTGGGAGGCTGCAGGGGGTTCACGTACCAGTACGAACGCATCGATA
CGCATCGTTGAAAATTGTTCCTATTAATAGACGTGTGGGTAACAACTGAT
AGCCAGGGCGCTGCTACTGCTTCTGATACGTTCGTCGTATATTTCTATTG
ATACACACTTTAGTAATACCGGTGCTGATGTTGATAATCTGCTGTACGTG
TGCCTGCTGTAGCTGCAATCGCAAAATGCAACCGCCACCGCCACCGCTGC
TACTATACCGCCTGCGCGCCAAAATCAGATATGTTCTTGTCACAATCATT
AAAAGTAATCCTATCTTGTTTTGCACTTGTTTTCGTTCGCTCCTTGGGTA
ACAAAGCAGGGCGGCGTGGGCATGAAGGAAGATGACGATGAGATCTCCTC
GTCCTCGTCCTCCTCCTCCCCTGCGGCGACCGCAGCCGCGGTGGCAGCCA
CCGCCGCCGCCGCCGCCGCCGCTGCCGCCGCTGCGGCCTCGGCCGCTTCG
ACCGCGGCAGCGCTCGGCGGCGGCGCCCTCGGCACCGCCGTGGGACCGCT
GCGAGTGTCTCGCTCGTCCGCGCTAGCGCCGCACCAGGCGCACCACCTCG
TCGCGCCCGGCGACAACGATGATGACGACGATCATCGACCAGGACATCTG
CTCATTGACACCGGCGGCGGCGGTGTGCACGGCAGCAACAGCCGCGGTGG
CGGTAGGGGTGGCGCGGGCGGCAGTGGTGGCGGTGGTAGTGTCGGAGGCG
GCAGCGGTAGCGTTAGCGGTGATGGCCTCGATGTTGGCCTGGATGGGGAT
GAGGGGGACGAGGAGGGGGAGGCCGGGGCGCGGCAGCGACGGAGAAGGGC
GAGGACGGCCCTGGCGGATGAGGCGGGCCATGGGCGGCACGGGCACGGGC
ACGGGGGTGAGGGGGCGCACGGGGACGCGGACGAGCCAGAGCTGGGCAGC
TTCGAGACGCTGGGCGCGGCGATTGGAGACTTCTGCCCGCAGTTCAAATT
CTCCTTCACCGACGACGTACACCTCGACCTTGGCTGCGGGCTTAAGGTGG
GATTTTTTTGTCGCGCGGGGGGGGGGGGGGGGGGGGGGGACGACCTATTA
ATAGGGCTGGGGTGGTTTACACAGTATTCTCGTATAGATGGCCGGTGGCG
AAATATTGAACGATAAGGGGCTCCTCATCGCGTGTCAGAAAGAGAGGGAG
TGGGGCAGTCGAACCGGTGTTGCCACTACAGAATCGAACCCGAGGGACCG
ACGGGCGCGCGAATGGTGCAATGCGCGAGCGAGGGTTCAATTTCAAAGGC
CGACGAGTTTTTTTTTATCTTGGCGTATGTAGCCGACCTTGTCCCAAGCA
TTGCCCTTCCCCCCCTCCCCCCCCCCGACCTAAACAAGCCCCTCTTCCAA
AACCCTTTTCGAAACGCCTCATCTACACCCCAAACACAAAAACTCAAAAA
AACATGAGCAGGCCGAGTTGAGAGATTTGGAGTCCTTCTCGGAGGCCCTC
CCGGGCCAGCACGGCAAGGGGGGTGAGGGCGACCTCATGGGACTCGGGGC
GGGCGGGCTGACGGGGGTGCCCTCTCACTCGCCGACGCCGGCGCAGCAGT
TGCTGTCGAGGAGTGGCCCCGTCATCAAGCCGGAGTTGATGATGATGCCA
GTTTCCCCGAGGATGGGGACGACTCGGTCCGGCACGGCCGCGGCGGCGGC
GGCGGCAGCGGCCGCGGCGGCCGCGGAGGGCCTCGACGAGGAGGCGGTGG
CGGCGGCGGCGGCTTCCGCCGCGGCTAGTGCGGCCGCTAGCGCGGCCGGA
TACTCAACGAACCACTACGCTTCGGGAGCGGCGTACAGCGGGCGGTATAC
AGGGCCGTACGCGACGACCTCGAGCCCTTCGGGATTGGGGTCGGATTTAG
GGTTGGAGTCGTCGGCGGTGTCGTCGGCAGCGGCGGCAGCGAGCGGGAGA
CCACACGGAGGACCGGGGGTGGGAGAGCTAGGAGGAGGCATGTACGGGAG
GGACGGGACGGGGGGGGTCGGGGGGGGTACGGGCCATCACGCTGCGCGCG
GGAGGCCCGTCGTGTCGGGGATGGGGATCATGGTGCGAGGCGGGCCGAGG
AATGGGGTGGCGGGGAGCGGCGCGGGCGAGGATGGAGAGGAGAGGAAGTT
CGTCGGGGCGTACTCGCCGGAAGCCAGGCGGCAACGGATAGACCGTTTCC
TACAGAAGCGCGAGCGCCGAGTGAGTTGATGGTGTTGGGTTCAATGTTAG
TGTTGATGCTGGGGTGGGTGTTGGGGTGGTCTTTGGTGTTGGCGTCGGTG
CTGGCGCTGGTGTTGTTGGGTGTTTTGTTGTTGCCATTTGGCTTGATCGA
GAGTTGCGTTTATCACCTTGCAGCGTCGATGCTCTGGGTCCTCTGTGTTT
TTGGCGCCGTCGGTGTGTTTAGGGCGTGAGTTGGGAAGTGATCCCGGGCG
AGCTCGTCACCTCGGGGTACGTAGTGTCAGTGAGTTTAGTCGGAGAAGCG
ACGGTGTTCTTGGAGTAGCAGTTCTTTTTGGGAGCAACGGTTGCTTGCCG
CTGTTGGTTGATATGGTGTGGGTAGGGGCAGAGCTTGATATGAGCAGCGA
CCGCTTGGAGACAAGGGCTTCCCCCTCTTTCCCTGGCCCATTTCTCAAGG
CGCAAACATTGTCGGTTGCCCTCCCTTAATATTTTCATACATTATAATTT
TGCGTCATGGAGCCAAGCTGTTGAGGCTTGCCAAGTTTTTTCTTTCGTTG
ACCCTCTCTCCCTCCCTCTCTTCCTCCCTCCCTCTCTTCCTCCCTCCCTC
CCTCCCTCCCTCCCTTCCTCCCTCTCTTTCTCTCTTTTTCCTTCTCTCTT
CCTCTCTTCCTCTCTTTATCTCTCCCTGTCTCTCCCTCTCCATTCGGTCT
CGCGTCTATTCGTGCCGCCTACTCTGCGGGGATCAATGAACCATTCAATA
AAACGAAACAACGATCAAACGAACAAAACCAACCAAATAAACCAACCAAC
TATCCAACTAACCAACCCCAGGTCTGGACGAAGATGGTCAAATACGACGT
CCGCAAGAACTTTGCCGACACAAGGATGCGGGTGAAGGGGCGTTTCGTGA
AGAAAGAGGACGAGGCCCTGCTGCGCGAAGTCATGGCGTGCGCCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig9783:2997..7893-

>mRNA_M-pyrifera_M_contig9783.22529.1 ID=mRNA_M-pyrifera_M_contig9783.22529.1|Name=mRNA_M-pyrifera_M_contig9783.22529.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3624bp|location=Sequence derived from alignment at M-pyrifera_M_contig9783:2997..7893- (Macrocystis pyrifera P11B4 male)
ATGGAGGAAGGGCTGCTCGACAGACGCGACTCGCTAGACCTCCTGGAGAA
CCTAGACTTCGGGATCATGGACATCGGTATGTCGGACGGGGAGCCGGATA
TACCGACTCGCGATGGCGCGGTCGAGCACAGCACCCTCCCCCCAGGAGGA
GCGGGAAAGGGGCCACGGGCGCCGCCGCCCCTACCCCCCCCCCCCGCTGC
GGGCGAGGAGGCTAGTGAGCGCGCGGGACGGAATAGCGGCAGTGGAGCCG
CTAGGCTCGGCGCTGGAGACGGGGCGGCGGGGGCGGCGGCCGGGGGTGGG
GGCGGGGAGAACGTTTCGGCGCAGGGGGGCGGTGGGGACGGGGTACAGGG
TGGAGGGGTCGCGGTGACCTCGTTTGGCGGGGGGGGTGGATCGTCACGCG
ACAGTGTCGCTATGGAGGAAGGGCTGCTCGACAGACGCGACTCGCTAGAC
CTCCTGGAGAACCTAGACTTCGGGATCATGGACATCGGTATGTCGGACGG
GGAGCCGGATATACCGACTCGCGATGGCGCGGTCGAGCACAGCACCCTCC
CCCCAGGAGGAGCGGGAAAGGGGCCACGGGCGCCGCCGCCCCTACCCCCC
CCCCCCGCTGCGGGCGAGGAGGCTAGTGAGCGCGCGGGACGGAATAGCGG
CAGTGGAGCCGCTAGGCTCGGCGCTGGAGACGGGGCGGCGGGGGCGGCGG
CCGGGGGTGGGGGCGGGGAGAACGTTTCGGCGCAGGGGGGCGGTGGGGAC
GGGGTACAGGGTGGAGGGGTCGCGGTGACCTCGTTTGGCGGGGGGGGTGG
ATCGTCACGCGACAGTGTCGCTCTTTGCGGCGAGACCTCAGACCACTTCG
ACATCGGGGACATGGCCTTCGATGCCACTTTTGAGCACGAATACGCAGAG
CAGGAGCTTTGCGGCGAGACCTCAGACCACTTCGACATCGGGGACATGGC
CTTCGATGCCACTTTTGAGCACGAATACGCAGAGCAGGAGGAAGATGACG
ATGAGATCTCCTCGTCCTCGTCCTCCTCCTCCCCTGCGGCGACCGCAGCC
GCGGTGGCAGCCACCGCCGCCGCCGCCGCCGCCGCTGCCGCCGCTGCGGC
CTCGGCCGCTTCGACCGCGGCAGCGCTCGGCGGCGGCGCCCTCGGCACCG
CCGTGGGACCGCTGCGAGTGTCTCGCTCGAAGATGACGATGAGATCTCCT
CGTCCTCGTCCTCCTCCTCCCCTGCGGCGACCGCAGCCGCGGTGGCAGCC
ACCGCCGCCGCCGCCGCCGCCGCTGCCGCCGCTGCGGCCTCGGCCGCTTC
GACCGCGGCAGCGCTCGGCGGCGGCGCCCTCGGCACCGCCGTGGGACCGC
TGCGAGTGTCTCGCTCGGGTGGCGCGGGCGGCAGTGGTGGCGGTGGTAGT
GGGTGGCGCGGGCGGCAGTGGTGGCGGTGGTAGTCGACGGAGAAGGGCGA
GGACGGCCCTGGCGGATGAGGCGGGCCATGGGCGGCACGGGCACGGGCAC
GGGGGTGAGGGGGCGCACGGGGACGCGGACGAGCCAGAGCTGGGCAGCTT
CGAGACGCTGGGCGCGGCGATTGGAGACTTCTGCCCGCAGTTCAAATTCT
CCTTCACCGACGACGTACACCTCGACCTTGGCTGCGGGCTTAAGCGACGG
AGAAGGGCGAGGACGGCCCTGGCGGATGAGGCGGGCCATGGGCGGCACGG
GCACGGGCACGGGGGTGAGGGGGCGCACGGGGACGCGGACGAGCCAGAGC
TGGGCAGCTTCGAGACGCTGGGCGCGGCGATTGGAGACTTCTGCCCGCAG
TTCAAATTCTCCTTCACCGACGACGTACACCTCGACCTTGGCTGCGGGCT
TAAGGCCGAGTTGAGAGATTTGGAGTCCTTCTCGGAGGCCCTCCCGGGCC
AGCACGGCAAGGGGGGTGAGGGCGACCTCATGGGACTCGGGGCGGGCGGG
CTGACGGGGGTGCCCTCTCACTCGCCGACGCCGGCGCAGCAGTTGCTGTC
GAGGAGTGGCCCCGTCATCAAGCCGGAGTTGATGATGATGCCAGTTTCCC
CGAGGATGGGGACGACTCGGTCCGGCACGGCCGCGGCGGCGGCGGCGGCA
GCGGCCGCGGCGGCCGCGGAGGGCCTCGACGAGGAGGCGGTGGCGGCGGC
GGCGGCTTCCGCCGCGGCTAGTGCGGCCGCTAGCGCGGCCGGATACTCAA
CGAACCACTACGCTTCGGGAGCGGCGTACAGCGGGCGGTATACAGGGCCG
TACGCGACGACCTCGAGCCCTTCGGGATTGGGGTCGGATTTAGGGTTGGA
GTCGTCGGCGGTGTCGTCGGCAGCGGCGGCAGCGAGCGGGAGACCACACG
GAGGACCGGGGGTGGGAGAGCTAGGAGGAGGCATGTACGGGAGGGACGGG
ACGGGGGGGGTCGGGGGGGGTACGGGCCATCACGCTGCGCGCGGGAGGCC
CGTCGTGTCGGGGATGGGGATCATGGTGCGAGGCGGGCCGAGGAATGGGG
TGGCGGGGAGCGGCGCGGGCGAGGATGGAGAGGAGAGGAAGTTCGTCGGG
GCGTACTCGCCGGAAGCCAGGCGGCAACGGATAGACCGTTTCCTACAGAA
GCGCGAGCGCCGAGCCGAGTTGAGAGATTTGGAGTCCTTCTCGGAGGCCC
TCCCGGGCCAGCACGGCAAGGGGGGTGAGGGCGACCTCATGGGACTCGGG
GCGGGCGGGCTGACGGGGGTGCCCTCTCACTCGCCGACGCCGGCGCAGCA
GTTGCTGTCGAGGAGTGGCCCCGTCATCAAGCCGGAGTTGATGATGATGC
CAGTTTCCCCGAGGATGGGGACGACTCGGTCCGGCACGGCCGCGGCGGCG
GCGGCGGCAGCGGCCGCGGCGGCCGCGGAGGGCCTCGACGAGGAGGCGGT
GGCGGCGGCGGCGGCTTCCGCCGCGGCTAGTGCGGCCGCTAGCGCGGCCG
GATACTCAACGAACCACTACGCTTCGGGAGCGGCGTACAGCGGGCGGTAT
ACAGGGCCGTACGCGACGACCTCGAGCCCTTCGGGATTGGGGTCGGATTT
AGGGTTGGAGTCGTCGGCGGTGTCGTCGGCAGCGGCGGCAGCGAGCGGGA
GACCACACGGAGGACCGGGGGTGGGAGAGCTAGGAGGAGGCATGTACGGG
AGGGACGGGACGGGGGGGGTCGGGGGGGGTACGGGCCATCACGCTGCGCG
CGGGAGGCCCGTCGTGTCGGGGATGGGGATCATGGTGCGAGGCGGGCCGA
GGAATGGGGTGGCGGGGAGCGGCGCGGGCGAGGATGGAGAGGAGAGGAAG
TTCGTCGGGGCGTACTCGCCGGAAGCCAGGCGGCAACGGATAGACCGTTT
CCTACAGAAGCGCGAGCGCCGAGTCTGGACGAAGATGGTCAAATACGACG
TCCGCAAGAACTTTGCCGACACAAGGATGCGGGTGAAGGGGCGTTTCGTG
AAGAAAGAGGACGAGGCCCTGCTGCGCGAAGTCATGGCGTGCGCCTAAGT
CTGGACGAAGATGGTCAAATACGACGTCCGCAAGAACTTTGCCGACACAA
GGATGCGGGTGAAGGGGCGTTTCGTGAAGAAAGAGGACGAGGCCCTGCTG
CGCGAAGTCATGGCGTGCGCCTAA
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