mRNA_M-pyrifera_M_contig97817.22524.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97817.22524.1 vs. uniprot
Match: UPI001457FCFD (uncharacterized protein LOC117323265 isoform X2 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI001457FCFD) HSP 1 Score: 93.2 bits (230), Expect = 5.270e-20 Identity = 54/134 (40.30%), Postives = 76/134 (56.72%), Query Frame = 1
Query: 22 VPEACLGAWRPVGLGKDGRLIKYLPGGHFSPHFDMCNGPDDTGRASMLTLMVYLNAGFGGGATEMLSNAKTDVEEDRGKVVPTAASKVGAFKPEKAGVVVVFRQGTLLHCGAPVTEGTKYLLRFDVWFEKVKEE 423
+P G W PVGL K RL +Y PGGHF+PHFD D R SM TLMVYLN F GG+T + ++T ++ GK + + +PE AG+ ++F L H G + + KY+LR D+ ++KV E+
Sbjct: 136 IPCVVEGKWVPVGLNKLFRLCRYHPGGHFAPHFDGFFEEDSKHR-SMKTLMVYLNGDFTGGSTNFVDESQTLHMDETGKYCAEEENILCKIQPE-AGMAIIFNHHRL-HEGQKLGDNKKYILRTDIMYKKVSED 266
BLAST of mRNA_M-pyrifera_M_contig97817.22524.1 vs. uniprot
Match: UPI001EE52A73 (uncharacterized protein LOC124275771 n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE52A73) HSP 1 Score: 89.4 bits (220), Expect = 1.350e-18 Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = 1
Query: 40 GAWRPVGLGKDGRLIKYLPGGHFSPHFDMCNGPDDTGRASMLTLMVYLNAGFGGGATEMLSNAKTDVEEDRGKVVPTAASKVGAFKPEKAGVVVVFRQGTLLHCGAPVTEGTKYLLRFDVWF 405
G W+P+GL RL +YLPGGHFSPHFD + T + S+ TLM+YLN F GG+T + + +++ GK + + +PE G+ +VF L H G + +G KY+LR D+ F
Sbjct: 136 GTWQPLGLNPVFRLCRYLPGGHFSPHFDG-HFSSSTDQRSLQTLMLYLNGDFSGGSTNFVDEKQVLYKDENGKFCAEEKNVLYRIQPEP-GMAIVFNHHRL-HEGEKLGDGRKYILRTDIMF 254
BLAST of mRNA_M-pyrifera_M_contig97817.22524.1 vs. uniprot
Match: A0A2T7NXY8_POMCA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NXY8_POMCA) HSP 1 Score: 85.1 bits (209), Expect = 5.760e-17 Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 1
Query: 40 GAWRPVGLGKDGRLIKYLPGGHFSPHFDMCNGPDDTGRASMLTLMVYLNAGFGGGATEMLSNAKTDVEEDRGKVVPTAASKVGAFKPEKAGVVVVFRQGTLLHCGAPVTEGTKYLLRFDVWFEKVKE 420
G W+P+GL RL +YLPGGHF+PHFD + S+ T M+YLN F GG+T + + + + GK + + + +PE AG+ ++F L H G + +G KY+LR D+ F + +
Sbjct: 146 GTWQPLGLNSMFRLCRYLPGGHFAPHFDG-HFVRSAQERSLQTFMLYLNGNFEGGSTNFIHEDQHLFKNEDGKYCAEEKNIICSIQPE-AGLAIIFNHHRL-HEGQQLKDGVKYILRTDIMFHNISQ 269
BLAST of mRNA_M-pyrifera_M_contig97817.22524.1 vs. uniprot
Match: L8H6B2_ACACA (Prolyl 4hydroxylase, alpha subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H6B2_ACACA) HSP 1 Score: 75.5 bits (184), Expect = 5.760e-14 Identity = 45/122 (36.89%), Postives = 60/122 (49.18%), Query Frame = 1
Query: 46 WRPVGLGKDGRLIKYLPGGHFSPHFDMCNGPDDTGRASMLTLMVYLNAGFGGGATEMLSNAKTDVEEDRGKVVPTAASKVGAFKPEKAGVVVVFRQGTLLHCGAPVTEGTKYLLRFDVWFEK 411
WRP GL + R +Y PG HFS HFD C + + S LT+M+YLN GF GGAT L K V+ AG+ +VF Q + H G + G KY++R D F++
Sbjct: 112 WRPYGLNERWRFCRYTPGQHFSSHFDGCFRASEDDK-SHLTVMLYLNGGFEGGATVFLEGTKDRVQP-------------------VAGMALVF-QHNIYHEGERLESGVKYIMRSDAMFQR 212
BLAST of mRNA_M-pyrifera_M_contig97817.22524.1 vs. uniprot
Match: A0A1E7FDC5_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDC5_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 6.000e-14 Identity = 47/128 (36.72%), Postives = 69/128 (53.91%), Query Frame = 1
Query: 13 ERVVPEACLGAWRPVGLGKDGRLIKYLPGGHFSPHFDMCNGPDDTGR-ASMLTLMVYLNAGFGGGATEMLSNAKTDVEEDRGKVVPTAASKVGAFKPEKAGVVVVFRQGTLLHCGAPVTEGTKYLLRF 393
E VP LG + G+G+ + KY PG +F+PHFD + + AS T++VYL+ F GGAT LS ++V++ A +P K G + RQG++LH G V EGTKY+++F
Sbjct: 157 EGQVPLEILGGRKFCGVGESFLVSKYAPGQYFAPHFDGRGAKRNAEKQASEFTVVVYLSDDFVGGATHYLSGQGSEVKQSV------------AVRPTK-GCAAIHRQGSVLHAGGAVKEGTKYIMQF 271
BLAST of mRNA_M-pyrifera_M_contig97817.22524.1 vs. uniprot
Match: UPI00106AAADA (uncharacterized protein LOC114527302 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106AAADA) HSP 1 Score: 73.6 bits (179), Expect = 1.130e-13 Identity = 50/133 (37.59%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 13 ERVVPEACLGAWRPVGLGKDGRLIKYLPGGHFSPHFDMCNGPDDTGRASMLTLMVYLNAGFGGGATEMLSNAKTDVEEDRGKVVPTAASKVGAFKPEKAGVVVVFRQGTLLHCGAPVTEGTKYLLRFDVWFEK 411
+ ++PE G + +GL + R ++Y G F PHFD D+ G S LTL +YLN F GGAT L N + ++ E+ VP K G V+VF Q +LHCG+ + +G KY +R DV F K
Sbjct: 47 KHLIPEKWEGR-KALGLNERLRFLRYDSGQEFKPHFDGSYARDN-GEKSYLTLQLYLNEDFTGGATTFLEN-RFELSENDVPCVP------------KTGRVLVF-QHDILHCGSILVKGRKYCVRTDVMFSK 163
BLAST of mRNA_M-pyrifera_M_contig97817.22524.1 vs. uniprot
Match: UPI001068F272 (uncharacterized protein LOC114517123 isoform X2 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001068F272) HSP 1 Score: 73.9 bits (180), Expect = 1.390e-13 Identity = 52/136 (38.24%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 13 ERVVPEACLGAWRPVGLGKDGRLIKYLPGGHFSPHFDMCNGPDDTGRASMLTLMVYLNAGFGGGATEMLSN---AKTDVEEDRGKVVPTAASKVGAFKPEKAGVVVVFRQGTLLHCGAPVTEGTKYLLRFDVWFEK 411
+ ++PE G + +GL + R ++Y PG F PHFD + D G AS LT+ +YLN GF GGAT L N + DV+ VP K G V+VF Q +LH G+ + +G KY LR DV F +
Sbjct: 75 KHLIPEKWRGR-KALGLNERLRFLRYDPGQEFKPHFDG-SYVRDNGEASYLTIQLYLNEGFTGGATTFLENFEFGRNDVD-----CVP------------KIGRVLVF-QHDILHSGSKLMKGRKYCLRTDVMFSR 190
BLAST of mRNA_M-pyrifera_M_contig97817.22524.1 vs. uniprot
Match: UPI00106B0DBF (uncharacterized protein LOC114517123 isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B0DBF) HSP 1 Score: 73.9 bits (180), Expect = 2.320e-13 Identity = 52/136 (38.24%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 13 ERVVPEACLGAWRPVGLGKDGRLIKYLPGGHFSPHFDMCNGPDDTGRASMLTLMVYLNAGFGGGATEMLSN---AKTDVEEDRGKVVPTAASKVGAFKPEKAGVVVVFRQGTLLHCGAPVTEGTKYLLRFDVWFEK 411
+ ++PE G + +GL + R ++Y PG F PHFD + D G AS LT+ +YLN GF GGAT L N + DV+ VP K G V+VF Q +LH G+ + +G KY LR DV F +
Sbjct: 104 KHLIPEKWRGR-KALGLNERLRFLRYDPGQEFKPHFDG-SYVRDNGEASYLTIQLYLNEGFTGGATTFLENFEFGRNDVD-----CVP------------KIGRVLVF-QHDILHSGSKLMKGRKYCLRTDVMFSR 219
BLAST of mRNA_M-pyrifera_M_contig97817.22524.1 vs. uniprot
Match: W6KVL0_9TRYP (Fe2OG dioxygenase domain-containing protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KVL0_9TRYP) HSP 1 Score: 73.2 bits (178), Expect = 1.370e-12 Identity = 45/127 (35.43%), Postives = 66/127 (51.97%), Query Frame = 1
Query: 40 GAWRPVGLGKDGRLIKYLPGGHFSPHFDMCNGPDDTGRASMLTLMVYLNAGFGGGATEMLSNAKTDV---EEDRGKVVPTAASKVGAFKPEKAGVVVVFRQGTLLHCGAPVTEGTKYLLRFDVWFEK 411
G W P L + L +Y PGGHF PH D D R S TL++YLN GG T + S + V + + K+ +A+++VG+ +P+K + LLH GAPV G KY+ R D+ + +
Sbjct: 140 GEWVPYALSSNLLLGRYKPGGHFMPHIDGSTVVDLNTR-SFYTLLLYLNDCPEGGETHLFSGEQHKVIFMDSEANKLRGSASNRVGSVEPKKGRAAFFYYD--LLHEGAPVVSGLKYICRADLLYRR 263
BLAST of mRNA_M-pyrifera_M_contig97817.22524.1 vs. uniprot
Match: A0A1E1IUX4_LEIGU (Fe2OG dioxygenase domain-containing protein n=4 Tax=Viannia TaxID=37616 RepID=A0A1E1IUX4_LEIGU) HSP 1 Score: 73.2 bits (178), Expect = 1.380e-12 Identity = 46/136 (33.82%), Postives = 67/136 (49.26%), Query Frame = 1
Query: 13 ERVVPEACLGAWRPVGLGKDGRLIKYLPGGHFSPHFDMCNGPDDTGRASMLTLMVYLNAGFGGGATEMLSNAKTDV---EEDRGKVVPTAASKVGAFKPEKAGVVVVFRQGTLLHCGAPVTEGTKYLLRFDVWFEK 411
E + G W P L ++ +Y PGGHF PH D D R S+ TL++YLN GG T + S + V +E+ + A +VGA P+K + + LLH GAPV +G KY+ R D+ + +
Sbjct: 132 EELFERDLAGTWVPHALSENLLFGRYRPGGHFMPHADGSTIVDLNTR-SLYTLLIYLNDCSRGGETFVFSGEQCSVMYLDEEENRYRGNTARRVGAVYPKKGSAALFYCN--LLHEGAPVVQGYKYICRADLLYRR 264 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97817.22524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97817.22524.1 >prot_M-pyrifera_M_contig97817.22524.1 ID=prot_M-pyrifera_M_contig97817.22524.1|Name=mRNA_M-pyrifera_M_contig97817.22524.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp EDVEERVVPEACLGAWRPVGLGKDGRLIKYLPGGHFSPHFDMCNGPDDTGback to top mRNA from alignment at M-pyrifera_M_contig97817:257..685- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97817.22524.1 ID=mRNA_M-pyrifera_M_contig97817.22524.1|Name=mRNA_M-pyrifera_M_contig97817.22524.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig97817:257..685- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97817:257..685- >mRNA_M-pyrifera_M_contig97817.22524.1 ID=mRNA_M-pyrifera_M_contig97817.22524.1|Name=mRNA_M-pyrifera_M_contig97817.22524.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig97817:257..685- (Macrocystis pyrifera P11B4 male)back to top |