mRNA_M-pyrifera_M_contig97498.22452.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97498.22452.1
Unique NamemRNA_M-pyrifera_M_contig97498.22452.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig97498.22452.1 vs. uniprot
Match: A0A3D1GDB0_9BACT (Sodium/glucose cotransporter (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GDB0_9BACT)

HSP 1 Score: 394 bits (1013), Expect = 3.850e-135
Identity = 206/236 (87.29%), Postives = 219/236 (92.80%), Query Frame = 1 
Query:    1 VFVNLTTVMFLGAKALDTIWGTGDGSLILIALIGLGVIAAAYSIYGGLSAVAWTDVVQVVLLVLGGLITTLIALDNVTPAGGIGNGLVHIYDVAGDKFDMILDRSNPEFQNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGIVFAAFLKLIIPFIVVIPGIIAYVMYSQPAGTTEIAGVVDAFTKDGGGTDNDNAYPWLISVFVTPGLKGLVVAALAAAIVSSMA 708
            VFVNLTTV+FLGAKALDTIWG GDGSL+++ALIGL +IAAAYS+YGGLSAVAWTDVVQVVLLVLGGL+TT IALD+VTP GG+ NGL HIYDVAGDKF MILDRSNPEF NLPGIAVL+GGMWVANLYYWGFNQYIIQRTLAAKSL+ESQKGIVFAAFLKLIIP IVVIPGIIAYVMY+QP GT  I GVVDAFTK  G TDNDNAYPWLISVFVTPG KGLVVAALAAAIVSS+A
Sbjct:  132 VFVNLTTVIFLGAKALDTIWGNGDGSLMMMALIGLALIAAAYSLYGGLSAVAWTDVVQVVLLVLGGLVTTFIALDHVTPDGGVMNGLAHIYDVAGDKFHMILDRSNPEFDNLPGIAVLVGGMWVANLYYWGFNQYIIQRTLAAKSLEESQKGIVFAAFLKLIIPLIVVIPGIIAYVMYTQPEGTAHINGVVDAFTKANGTTDNDNAYPWLISVFVTPGFKGLVVAALAAAIVSSLA 367
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BLAST of mRNA_M-pyrifera_M_contig97498.22452.1 vs. uniprot
Match: A0A3M8G008_9BACT (Sodium/glucose cotransporter n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G008_9BACT)

HSP 1 Score: 385 bits (990), Expect = 1.180e-129
Identity = 201/236 (85.17%), Postives = 217/236 (91.95%), Query Frame = 1 
Query:    1 VFVNLTTVMFLGAKALDTIWGTGDGSLILIALIGLGVIAAAYSIYGGLSAVAWTDVVQVVLLVLGGLITTLIALDNVTPAGGIGNGLVHIYDVAGDKFDMILDRSNPEFQNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGIVFAAFLKLIIPFIVVIPGIIAYVMYSQPAGTTEIAGVVDAFTKDGGGTDNDNAYPWLISVFVTPGLKGLVVAALAAAIVSSMA 708
            +FVNLTTV+FLGAKALDTIWGTGDGSL++I LIGL +IAAAYS+YGGLSAVAWTDV+QV LLVLGGL+TTLIAL +VTP GGI NGLVHIYDVA DKF MILDRSNPEFQNLPGIAVL+GGMWVANLYYWGFNQYIIQRTLAAKSL+ESQKGIVFAA LKLIIP IVVIPGIIAYV+Y QP GT+ I GV++AFTK  GG DND AYPWLISVFVTPG KGLVVAALAAAIVSS+A
Sbjct:  132 IFVNLTTVIFLGAKALDTIWGTGDGSLLVICLIGLALIAAAYSLYGGLSAVAWTDVIQVALLVLGGLVTTLIALHHVTPEGGILNGLVHIYDVADDKFHMILDRSNPEFQNLPGIAVLVGGMWVANLYYWGFNQYIIQRTLAAKSLEESQKGIVFAAILKLIIPLIVVIPGIIAYVLYFQPEGTSNIPGVLEAFTKPDGGIDNDKAYPWLISVFVTPGFKGLVVAALAAAIVSSLA 367
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BLAST of mRNA_M-pyrifera_M_contig97498.22452.1 vs. uniprot
Match: A0A3M8FYU5_9BACT (Sodium/glucose cotransporter n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8FYU5_9BACT)

HSP 1 Score: 385 bits (989), Expect = 1.670e-129
Identity = 198/234 (84.62%), Postives = 217/234 (92.74%), Query Frame = 1 
Query:    7 VNLTTVMFLGAKALDTIWGTGDGSLILIALIGLGVIAAAYSIYGGLSAVAWTDVVQVVLLVLGGLITTLIALDNVTPAGGIGNGLVHIYDVAGDKFDMILDRSNPEFQNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGIVFAAFLKLIIPFIVVIPGIIAYVMYSQPAGTTEIAGVVDAFTKDGGGTDNDNAYPWLISVFVTPGLKGLVVAALAAAIVSSMA 708
            VNLTTVMFLGAKALDTIWG GDGSL+L+ALIGL +IAA YSIYGGLSAVAWTDV+QV+LLVLGG++TT++AL+ VTP GG+  G VHI++VA DKFDMILDRSNPEF NLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSL+ESQKGIV AAFLKLIIPFIVVIPGIIAYVMY+QP GT+EIAGVV+AFTK  G TDNDNAYPWLISVFV PG +GLVVAALAAAI+SSMA
Sbjct:  134 VNLTTVMFLGAKALDTIWGVGDGSLLLLALIGLALIAATYSIYGGLSAVAWTDVIQVILLVLGGIVTTIVALNAVTPEGGVIKGAVHIFEVANDKFDMILDRSNPEFNNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLEESQKGIVLAAFLKLIIPFIVVIPGIIAYVMYAQPEGTSEIAGVVEAFTKSDGTTDNDNAYPWLISVFVAPGFRGLVVAALAAAIISSMA 367
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BLAST of mRNA_M-pyrifera_M_contig97498.22452.1 vs. uniprot
Match: A0A2E6N1V8_9BACT (Sodium/glucose cotransporter n=5 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A2E6N1V8_9BACT)

HSP 1 Score: 375 bits (963), Expect = 1.550e-125
Identity = 198/236 (83.90%), Postives = 212/236 (89.83%), Query Frame = 1 
Query:    1 VFVNLTTVMFLGAKALDTIWGTGDGSLILIALIGLGVIAAAYSIYGGLSAVAWTDVVQVVLLVLGGLITTLIALDNVTPAGGIGNGLVHIYDVAGDKFDMILDRSNPEFQNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGIVFAAFLKLIIPFIVVIPGIIAYVMYSQPAGTTEIAGVVDAFTKDGGGTDNDNAYPWLISVFVTPGLKGLVVAALAAAIVSSMA 708
            +FVNLTTV+FLGAKALDTI+G GDGSLI  +LIGL +IAAAYSIYGGLSAVAWTDVVQVVLLVLGGLITT +ALD VTP GGI  G+ HIYDVAGDKF MILDRSNPEF NLPGIAVL+GGMWVANLYYWGFNQYIIQRTLAAKSL+ESQKGIVFAAFLKLIIP IVVIPGI+AYVM+SQP GT  I GVV+ F+K GGG DND AYPWLIS FV PG KGLVVAALAAAIVSS+A
Sbjct:  135 IFVNLTTVIFLGAKALDTIFGVGDGSLIWASLIGLALIAAAYSIYGGLSAVAWTDVVQVVLLVLGGLITTFVALDQVTPDGGIIRGINHIYDVAGDKFHMILDRSNPEFNNLPGIAVLVGGMWVANLYYWGFNQYIIQRTLAAKSLEESQKGIVFAAFLKLIIPLIVVIPGIVAYVMFSQPEGTNTIPGVVEVFSKTGGGLDNDKAYPWLISQFVMPGFKGLVVAALAAAIVSSLA 370
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BLAST of mRNA_M-pyrifera_M_contig97498.22452.1 vs. uniprot
Match: A0A521CR38_9BACT (Solute:Na+ symporter, SSS family n=1 Tax=Aliifodinibius sediminis TaxID=1214077 RepID=A0A521CR38_9BACT)

HSP 1 Score: 369 bits (946), Expect = 5.580e-123
Identity = 189/236 (80.08%), Postives = 214/236 (90.68%), Query Frame = 1 
Query:    1 VFVNLTTVMFLGAKALDTIWGTGDGSLILIALIGLGVIAAAYSIYGGLSAVAWTDVVQVVLLVLGGLITTLIALDNVTPAGGIGNGLVHIYDVAGDKFDMILDRSNPEFQNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGIVFAAFLKLIIPFIVVIPGIIAYVMYSQPAGTTEIAGVVDAFTKDGGGTDNDNAYPWLISVFVTPGLKGLVVAALAAAIVSSMA 708
            VFVNLTTVMFLGAKALDTI GTGDGSL++ AL+GL +IAAAYS+YGGLSAVAWTDV+QV LLVLGGL+TT +AL NVTP+GGI +G  H+Y+VAGDKF+MIL+RSNPEFQNLPGIAVLIGG+WVANLYYWGFNQYIIQRTLAAKSLKESQKGI+FAAFLKLIIP IVVIPGII YV+Y+QPAGT +I G++D FT   G  + DNAYPWLI VF+TPG +GLVVAALAAAIVSS+A
Sbjct:  134 VFVNLTTVMFLGAKALDTIMGTGDGSLLIHALVGLALIAAAYSLYGGLSAVAWTDVLQVGLLVLGGLVTTFVALHNVTPSGGIIDGFAHLYEVAGDKFNMILNRSNPEFQNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSLKESQKGIIFAAFLKLIIPLIVVIPGIIVYVLYTQPAGTAQIPGIMDVFTNPDGSIEYDNAYPWLIKVFLTPGFRGLVVAALAAAIVSSLA 369
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BLAST of mRNA_M-pyrifera_M_contig97498.22452.1 vs. uniprot
Match: A0A6A8QA28_9BACT (Sodium/solute symporter n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8QA28_9BACT)

HSP 1 Score: 366 bits (939), Expect = 6.360e-122
Identity = 189/236 (80.08%), Postives = 212/236 (89.83%), Query Frame = 1 
Query:    1 VFVNLTTVMFLGAKALDTIWGTGDGSLILIALIGLGVIAAAYSIYGGLSAVAWTDVVQVVLLVLGGLITTLIALDNVTPAGGIGNGLVHIYDVAGDKFDMILDRSNPEFQNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGIVFAAFLKLIIPFIVVIPGIIAYVMYSQPAGTTEIAGVVDAFTKDGGGTDNDNAYPWLISVFVTPGLKGLVVAALAAAIVSSMA 708
            VFVNLTTVMFLGAKALDTI G+GDGS+++ ALIGL +IAAAYS+YGGLSAVAWTDV+QV LLVLGGL+TT+IAL NVTP GGI NG  H+YDVAGDKF+MILD+SNPEF+NLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGI+FAAFLKLIIP IVVIPGII YV+Y+QP GT +I G++  FT   G  + DNAYPWLI VF++PG KGLVVAALAAAIVSS+A
Sbjct:  134 VFVNLTTVMFLGAKALDTIMGSGDGSMLIYALIGLALIAAAYSLYGGLSAVAWTDVLQVGLLVLGGLVTTVIALYNVTPEGGILNGFAHLYDVAGDKFNMILDKSNPEFKNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGIIFAAFLKLIIPLIVVIPGIIVYVLYTQPDGTAQIPGIISTFTNADGSIEYDNAYPWLIKVFLSPGFKGLVVAALAAAIVSSLA 369
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BLAST of mRNA_M-pyrifera_M_contig97498.22452.1 vs. uniprot
Match: A0A521BS65_9BACT (Solute:Na+ symporter, SSS family n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521BS65_9BACT)

HSP 1 Score: 365 bits (938), Expect = 8.480e-122
Identity = 189/236 (80.08%), Postives = 209/236 (88.56%), Query Frame = 1 
Query:    1 VFVNLTTVMFLGAKALDTIWGTGDGSLILIALIGLGVIAAAYSIYGGLSAVAWTDVVQVVLLVLGGLITTLIALDNVTPAGGIGNGLVHIYDVAGDKFDMILDRSNPEFQNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGIVFAAFLKLIIPFIVVIPGIIAYVMYSQPAGTTEIAGVVDAFTKDGGGTDNDNAYPWLISVFVTPGLKGLVVAALAAAIVSSMA 708
            VFVNLTTVMFLGAKALDTI GTGDGSLI+ ALIGL +IAAAYS+YGGLSAVAWTDV+QV LLVLGG +TT +AL N+TP GGI NGL H+Y+ AGDKF MILDRSNPEF NLPGIAVLIGG+WVANLYYWGFNQYIIQRTLAAKSLKESQKGI+FAAFLKL+IP IVVIPGII YV+Y+QP GT  I GV+DAFT+  G  + DNAYPWLI +F+ PG KGLVVAALAAAIVSS+A
Sbjct:  132 VFVNLTTVMFLGAKALDTIMGTGDGSLIMYALIGLALIAAAYSLYGGLSAVAWTDVLQVGLLVLGGFVTTFVALHNITPEGGIFNGLSHLYEHAGDKFQMILDRSNPEFNNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSLKESQKGIIFAAFLKLLIPLIVVIPGIIVYVLYTQPEGTAHIPGVLDAFTRTDGSINYDNAYPWLIKIFLAPGFKGLVVAALAAAIVSSLA 367
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BLAST of mRNA_M-pyrifera_M_contig97498.22452.1 vs. uniprot
Match: A0A2D9FYY7_9BACT (Sodium/glucose cotransporter n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FYY7_9BACT)

HSP 1 Score: 363 bits (933), Expect = 4.830e-121
Identity = 186/236 (78.81%), Postives = 209/236 (88.56%), Query Frame = 1 
Query:    1 VFVNLTTVMFLGAKALDTIWGTGDGSLILIALIGLGVIAAAYSIYGGLSAVAWTDVVQVVLLVLGGLITTLIALDNVTPAGGIGNGLVHIYDVAGDKFDMILDRSNPEFQNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGIVFAAFLKLIIPFIVVIPGIIAYVMYSQPAGTTEIAGVVDAFTKDGGGTDNDNAYPWLISVFVTPGLKGLVVAALAAAIVSSMA 708
            VFVNLTTV+FLGAKALDTI GTGDGSL++ ALIGL +IAAAYS+YGGLSAVAWTDV+QV LL+LGG +TT +AL+N+TP GG+ NG  H+YDVAGDKF+MILDR NPEF+NLPGIAVLIGG+WVANLYYWGFNQYIIQRTLAAKSLKE+QKGI+FAAFLKLIIP IVVIPGII YV+Y QP GT  I GV D FT   G  + DNAYPWLISVF++PG KGLVVAALAAAIVSS+A
Sbjct:  132 VFVNLTTVIFLGAKALDTIMGTGDGSLLIYALIGLALIAAAYSLYGGLSAVAWTDVLQVGLLILGGFVTTFVALNNITPEGGVLNGFAHLYDVAGDKFNMILDRDNPEFKNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSLKEAQKGIIFAAFLKLIIPLIVVIPGIIVYVLYFQPEGTAHIPGVFDVFTNPDGSIEYDNAYPWLISVFLSPGFKGLVVAALAAAIVSSLA 367
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BLAST of mRNA_M-pyrifera_M_contig97498.22452.1 vs. uniprot
Match: UPI000CD9BC51 (sodium/sugar symporter n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD9BC51)

HSP 1 Score: 363 bits (933), Expect = 4.830e-121
Identity = 187/236 (79.24%), Postives = 210/236 (88.98%), Query Frame = 1 
Query:    1 VFVNLTTVMFLGAKALDTIWGTGDGSLILIALIGLGVIAAAYSIYGGLSAVAWTDVVQVVLLVLGGLITTLIALDNVTPAGGIGNGLVHIYDVAGDKFDMILDRSNPEFQNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGIVFAAFLKLIIPFIVVIPGIIAYVMYSQPAGTTEIAGVVDAFTKDGGGTDNDNAYPWLISVFVTPGLKGLVVAALAAAIVSSMA 708
            VFVNLTTVMFLGAKALDTI GTGDGSL++ AL+GL +IAAAYS+YGGLSAVAWTDV+QV LLVLGG +TT  AL N+TP GGI NG+ H+YD AGDKF+MIL+RSNPEF NLPGIAVLIGG+WVANLYYWGFNQYIIQRTLAAKSLKESQKGI+FAAFLKL+IP IVVIPGII YV+Y+QP GTT+I GV+  FT   G  + DNAYPWLISVF++PG KGLVVAALAAAIVSS+A
Sbjct:  132 VFVNLTTVMFLGAKALDTIMGTGDGSLVIYALVGLALIAAAYSLYGGLSAVAWTDVLQVGLLVLGGFVTTFAALYNLTPDGGILNGMAHLYDTAGDKFNMILERSNPEFDNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSLKESQKGIIFAAFLKLLIPLIVVIPGIIVYVLYTQPEGTTQIPGVLSVFTNPDGSVEYDNAYPWLISVFLSPGFKGLVVAALAAAIVSSLA 367
[Close]
BLAST of mRNA_M-pyrifera_M_contig97498.22452.1 vs. uniprot
Match: A0A7V1LKA8_9BACT (Sodium/glucose cotransporter n=2 Tax=Caldithrix abyssi TaxID=187145 RepID=A0A7V1LKA8_9BACT)

HSP 1 Score: 360 bits (923), Expect = 1.660e-119
Identity = 187/236 (79.24%), Postives = 208/236 (88.14%), Query Frame = 1 
Query:    1 VFVNLTTVMFLGAKALDTIWGTGDGSLILIALIGLGVIAAAYSIYGGLSAVAWTDVVQVVLLVLGGLITTLIALDNVTPAGGIGNGLVHIYDVAGDKFDMILDRSNPEFQNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGIVFAAFLKLIIPFIVVIPGIIAYVMYSQPAGTTEIAGVVDAFTKDGGGTDNDNAYPWLISVFVTPGLKGLVVAALAAAIVSSMA 708
            VFVNLTTVMFLGAKALDTI G GDGSL++I++IGLGV+AAAYS+YGGLSAVAWTDV+QVVLLV+GGLITT IALD VTP GGI NG  H+YDVAGDKF MILDR+NPEF NLPGIAVLIGGMW+ANLYYWGFNQYIIQRTLAAKSLKE+Q+GI FAAFLKLIIPFIVVIPGI+AYVM+S P GT  + GV  AF+   GG + D AYPWLIS FV  GLKG+VVAAL AAI+SS+A
Sbjct:  134 VFVNLTTVMFLGAKALDTILGNGDGSLLMISMIGLGVVAAAYSLYGGLSAVAWTDVIQVVLLVVGGLITTFIALDYVTPEGGILNGFSHVYDVAGDKFHMILDRANPEFSNLPGIAVLIGGMWIANLYYWGFNQYIIQRTLAAKSLKEAQRGIAFAAFLKLIIPFIVVIPGIVAYVMFSHPEGTVLVEGVRSAFSLPDGGINYDKAYPWLISTFVPTGLKGVVVAALTAAIISSLA 369
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97498.22452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D1GDB0_9BACT3.850e-13587.29Sodium/glucose cotransporter (Fragment) n=1 Tax=Ba... [more]
A0A3M8G008_9BACT1.180e-12985.17Sodium/glucose cotransporter n=1 Tax=Balneola sp. ... [more]
A0A3M8FYU5_9BACT1.670e-12984.62Sodium/glucose cotransporter n=1 Tax=Balneola sp. ... [more]
A0A2E6N1V8_9BACT1.550e-12583.90Sodium/glucose cotransporter n=5 Tax=Bacteroidetes... [more]
A0A521CR38_9BACT5.580e-12380.08Solute:Na+ symporter, SSS family n=1 Tax=Aliifodin... [more]
A0A6A8QA28_9BACT6.360e-12280.08Sodium/solute symporter n=1 Tax=Balneolaceae bacte... [more]
A0A521BS65_9BACT8.480e-12280.08Solute:Na+ symporter, SSS family n=1 Tax=Gracilimo... [more]
A0A2D9FYY7_9BACT4.830e-12178.81Sodium/glucose cotransporter n=3 Tax=Balneolaceae ... [more]
UPI000CD9BC514.830e-12179.24sodium/sugar symporter n=1 Tax=Gracilimonas amylol... [more]
A0A7V1LKA8_9BACT1.660e-11979.24Sodium/glucose cotransporter n=2 Tax=Caldithrix ab... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97498contigM-pyrifera_M_contig97498:1..708 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score365.2
Seed ortholog evalue2.3e-98
Seed eggNOG ortholog1121930.AQXG01000007_gene415
Preferred namesglT
KEGG koko:K03307
KEGG TC2.A.21
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
EggNOG OGs4NE9S@976,COG4146@1,COG4146@2
COG Functional cat.S
Best tax levelBacteroidetes
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size708
Cds size684
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816891.6587296-CDS-M-pyrifera_M_contig97498:0..6841622816891.6587296-CDS-M-pyrifera_M_contig97498:0..684Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97498 1..684 -
1692278239.6938136-CDS-M-pyrifera_M_contig97498:0..6841692278239.6938136-CDS-M-pyrifera_M_contig97498:0..684Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97498 1..684 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816891.6749156-UTR-M-pyrifera_M_contig97498:684..7081622816891.6749156-UTR-M-pyrifera_M_contig97498:684..708Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig97498 685..708 -
1692278239.712486-UTR-M-pyrifera_M_contig97498:684..7081692278239.712486-UTR-M-pyrifera_M_contig97498:684..708Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig97498 685..708 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97498.22452.1prot_M-pyrifera_M_contig97498.22452.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97498 1..684 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97498.22452.1

>prot_M-pyrifera_M_contig97498.22452.1 ID=prot_M-pyrifera_M_contig97498.22452.1|Name=mRNA_M-pyrifera_M_contig97498.22452.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp
MFLGAKALDTIWGTGDGSLILIALIGLGVIAAAYSIYGGLSAVAWTDVVQ
VVLLVLGGLITTLIALDNVTPAGGIGNGLVHIYDVAGDKFDMILDRSNPE
FQNLPGIAVLIGGMWVANLYYWGFNQYIIQRTLAAKSLKESQKGIVFAAF
LKLIIPFIVVIPGIIAYVMYSQPAGTTEIAGVVDAFTKDGGGTDNDNAYP
WLISVFVTPGLKGLVVAALAAAIVSSMA
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mRNA from alignment at M-pyrifera_M_contig97498:1..708-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97498.22452.1 ID=mRNA_M-pyrifera_M_contig97498.22452.1|Name=mRNA_M-pyrifera_M_contig97498.22452.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig97498:1..708- (Macrocystis pyrifera P11B4 male)
GTATTCGTAAACTTAACGACGGTTATGTTTCTTGGTGCCAAAGCACTCGA
TACTATTTGGGGAACTGGAGATGGAAGCCTTATTCTTATTGCGCTGATTG
GACTTGGTGTGATCGCAGCAGCTTATTCTATTTATGGAGGTCTTTCAGCG
GTTGCATGGACCGATGTAGTTCAAGTAGTGCTTCTTGTTCTGGGGGGATT
GATTACTACTCTTATCGCTCTTGATAATGTGACACCGGCTGGAGGAATAG
GAAACGGTCTTGTACACATTTATGACGTAGCTGGGGATAAATTTGATATG
ATACTGGATCGTTCAAATCCTGAATTCCAAAACTTACCAGGCATTGCCGT
TTTAATTGGCGGGATGTGGGTGGCTAATTTATATTATTGGGGATTTAACC
AATACATCATCCAGCGTACACTCGCAGCAAAATCGCTTAAAGAATCACAA
AAAGGGATCGTGTTTGCAGCTTTTCTAAAACTAATTATTCCGTTTATTGT
CGTAATTCCTGGAATCATTGCCTATGTAATGTACTCCCAGCCAGCAGGAA
CTACAGAGATTGCAGGAGTAGTAGACGCATTTACTAAAGATGGAGGCGGA
ACGGATAATGACAATGCTTACCCGTGGTTGATCAGCGTATTTGTAACGCC
AGGATTAAAAGGCTTAGTGGTTGCCGCCCTCGCAGCTGCTATCGTATCCT
CGATGGCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97498:1..708-

>mRNA_M-pyrifera_M_contig97498.22452.1 ID=mRNA_M-pyrifera_M_contig97498.22452.1|Name=mRNA_M-pyrifera_M_contig97498.22452.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1368bp|location=Sequence derived from alignment at M-pyrifera_M_contig97498:1..708- (Macrocystis pyrifera P11B4 male)
ATGTTTCTTGGTGCCAAAGCACTCGATACTATTTGGGGAACTGGAGATGG
AAGCCTTATTCTTATTGCGCTGATTGGACTTGGTGTGATCGCAGCAGCTT
ATTCTATTTATGGAGGTCTTTCAGCGGTTGCATGGACCGATGTAGTTCAA
GTAGTGCTTCTTGTTCTGGGGGGATTGATTACTACTCTTATCGCTCTTGA
TAATGTGACACCGGCTGGAGGAATAGGAAACGGTCTTGTACACATTTATG
ACGTAGCTGGGGATAAATTTGATATGATACTGGATCGTTCAAATCCTGAA
TTCCAAAACTTACCAGGCATTGCCGTTTTAATTGGCGGGATGTGGGTGGC
TAATTTATATTATTGGGGATTTAACCAATACATCATCCAGCGTACACTCG
CAGCAAAATCGCTTAAAGAATCACAAAAAGGGATCGTGTTTGCAGCTTTT
CTAAAACTAATTATTCCGTTTATTGTCGTAATTCCTGGAATCATTGCCTA
TGTAATGTACTCCCAGCCAGCAGGAACTACAGAGATTGCAGGAGTAGTAG
ACGCATTTACTAAAGATGGAGGCGGAACGGATAATGACAATGCTTACCCG
TGGTTGATCAGCGTATTTGTAACGCCAGGATTAAAAGGCTTAGTGGTTGC
CGCCCTCGCAGCTGCTATCGTATCCTCGATGGCAATGTTTCTTGGTGCCA
AAGCACTCGATACTATTTGGGGAACTGGAGATGGAAGCCTTATTCTTATT
GCGCTGATTGGACTTGGTGTGATCGCAGCAGCTTATTCTATTTATGGAGG
TCTTTCAGCGGTTGCATGGACCGATGTAGTTCAAGTAGTGCTTCTTGTTC
TGGGGGGATTGATTACTACTCTTATCGCTCTTGATAATGTGACACCGGCT
GGAGGAATAGGAAACGGTCTTGTACACATTTATGACGTAGCTGGGGATAA
ATTTGATATGATACTGGATCGTTCAAATCCTGAATTCCAAAACTTACCAG
GCATTGCCGTTTTAATTGGCGGGATGTGGGTGGCTAATTTATATTATTGG
GGATTTAACCAATACATCATCCAGCGTACACTCGCAGCAAAATCGCTTAA
AGAATCACAAAAAGGGATCGTGTTTGCAGCTTTTCTAAAACTAATTATTC
CGTTTATTGTCGTAATTCCTGGAATCATTGCCTATGTAATGTACTCCCAG
CCAGCAGGAACTACAGAGATTGCAGGAGTAGTAGACGCATTTACTAAAGA
TGGAGGCGGAACGGATAATGACAATGCTTACCCGTGGTTGATCAGCGTAT
TTGTAACGCCAGGATTAAAAGGCTTAGTGGTTGCCGCCCTCGCAGCTGCT
ATCGTATCCTCGATGGCA
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