mRNA_M-pyrifera_M_contig9747.22449.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9747.22449.1
Unique NamemRNA_M-pyrifera_M_contig9747.22449.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig9747.22449.1 vs. uniprot
Match: D8LTK3_ECTSI (Metallophosphoesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTK3_ECTSI)

HSP 1 Score: 560 bits (1444), Expect = 3.120e-196
Identity = 281/378 (74.34%), Postives = 319/378 (84.39%), Query Frame = 1
Query:    1 QVRLLRAAFVLVYMTIYGITISSLVFEQTVSTTNGKDPHPWMYFSFQWAGGFVLLLVSAWFVDIFLMTFRVLKWCWRRFL------LGAREKGE-KFTFPLWAFPLLWLVTFVTLVSVASTQGIKDPVVRTIEVPMANLPTCLDGYSLAMISDIHAGPTVGRAEIARHAEAINALGADAIVMVGDLVDDQVEDIGSIVEPIADFSAPDGQFFVLGNHEEYTREAKEWTKFVADRGFTVLEDTRVTLPPGAEAA----NDDCFFYLAGVSDYESSPDYSAALDGRDDGVATVLLAHQPTQVNEAADYS-VGLQLSGHTHGGQMFPYHALAYLDQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLIVLRSPEV 1098
            QVR LRA FVLV + IY IT+S++  EQ V TTNG+DPHPWMYFSFQ+AG FVLL+VSAWFVDIF+MTFRV ++ W RF         A   G+ KF  PL AFPL+WLV FV LV+VAS QG +DPV RT+EVP+ANLP CLDGYSLAM+SD+HAGPTVG++E++RH EAINALGADAIVMVGDLVDDQVEDIGSIV+PI+ FSAPDGQFF  GNHEEYT +A++W +FVADRGFTVL DTR+TLPPGAE A    N+ CFFYLAGV+DYES P Y  ALDGRDD VATVLLAH+P QV EA+ YS VGLQLSGHTHGGQ+FPYH LAYL+QGYVSGLHKK DTFLYVSEGAVGWGPRMRLLSTTEYTL++LRSPE+
Sbjct:   99 QVRALRALFVLVLVGIYAITLSAVALEQLVGTTNGRDPHPWMYFSFQFAGAFVLLIVSAWFVDIFVMTFRVSRYLWGRFTKKGDQAAAATATGQQKFALPLLAFPLMWLVVFVILVAVASVQGSRDPVTRTVEVPLANLPACLDGYSLAMVSDLHAGPTVGKSEMSRHVEAINALGADAIVMVGDLVDDQVEDIGSIVDPISGFSAPDGQFFAYGNHEEYTGQARKWGEFVADRGFTVLNDTRITLPPGAETASTSNNEGCFFYLAGVNDYESDPQYGPALDGRDDSVATVLLAHEPIQVKEASKYSSVGLQLSGHTHGGQVFPYHVLAYLNQGYVSGLHKKRDTFLYVSEGAVGWGPRMRLLSTTEYTLVILRSPEL 476          
BLAST of mRNA_M-pyrifera_M_contig9747.22449.1 vs. uniprot
Match: UPI0017BE2591 (Metallophosphoesterase n=1 Tax=Hamadaea sp. TaxID=2024425 RepID=UPI0017BE2591)

HSP 1 Score: 207 bits (527), Expect = 8.640e-60
Identity = 116/256 (45.31%), Postives = 154/256 (60.16%), Query Frame = 1
Query:  340 TQGIKDPVVRTIEVPMANLPTCLDGYSLAMISDIHAGPTVGRAEIARHAEAINALGADAIVMVGDLVDDQVEDIGSIVEPIADFSAPDGQFFVLGNHEEYTREAKEWTKFVADRGFTVLEDTRVTLPPGAEAANDDCFFYLAGVSD-----YESSPDYSAALDGRDDGVATVLLAHQPTQVNEAADYSVGLQLSGHTHGGQMFPYHALAYLDQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLIVLRSP 1092
            TQ +  PV++  ++ +A LP  LDGY +A++SDIH GP  GRA   R  E +N L AD + +VGDLVD  V  +G+  EP+A   + DG +FV GNHE Y+   +EW   VA+ G   L + RV LP G +         LAGV+D     +   PD++ AL  RD     VLLAHQP QV +AA+Y V LQLSGHTHGGQM P++ +  L Q  VSG    D T +YV+ GA  WGP +R+ +  + TLI LR+P
Sbjct:  162 TQALGRPVLKRRQIALAKLPRALDGYRIALVSDIHLGPLAGRAHAERIVEIVNGLDADIVTVVGDLVDGTVAQLGADAEPLAGLRSRDGAYFVTGNHEYYSGY-EEWLAEVAELGMKPLRNERVELPGGLD---------LAGVNDVTGESFSDGPDFAKALGDRDRAKPVVLLAHQPVQVRQAAEYGVDLQLSGHTHGGQMVPFNLVVPLQQPVVSGYDVIDGTQIYVTNGAGFWGPPVRVGAPPDVTLIELRTP 407          
BLAST of mRNA_M-pyrifera_M_contig9747.22449.1 vs. uniprot
Match: A0A2V2PZV5_9ACTN (Metallophos domain-containing protein (Fragment) n=1 Tax=Streptomyces sp. FT05W TaxID=2202417 RepID=A0A2V2PZV5_9ACTN)

HSP 1 Score: 202 bits (513), Expect = 1.220e-59
Identity = 113/254 (44.49%), Postives = 154/254 (60.63%), Query Frame = 1
Query:  349 IKDPVVRTIEVPMANLPTCLDGYSLAMISDIHAGPTVGRAEIARHAEAINALGADAIVMVGDLVDDQVEDIGSIVEPIADFSAPDGQFFVLGNHEEYTREAKEWTKFVADRGFTVLEDTRVTLPPGAEAANDDCFFYLAGVSDYESS-----PDYSAALDGRDDGVATVLLAHQPTQVNEAADYSVGLQLSGHTHGGQMFPYHALAYLDQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLIVLRSPE 1095
            ++ P V+ + VP+A LP     + +A++SDIH GP +GRA   R  + INA G+D + +VGDLVD  V D+GS  EP+A   A  G FFV GNHE Y   A +W   V + G   LE+ RV +            F LAGV+D         PD++ AL  RD G A+VLLAHQP  +++A +Y VGLQLSGHTHGGQ++P + LA L    V+GL +  DT LYVS GA  WGP +R+ + ++ T++ L SP+
Sbjct:    6 LRGPRVKRVTVPLAGLPRSAHRFRIAVVSDIHLGPILGRAHTRRIVDTINATGSDLVAVVGDLVDGSVADLGSAAEPLAGLEARHGSFFVTGNHE-YFSGAAQWVDHVRELGLHPLENARVEIAG----------FDLAGVNDVAGESEGQGPDFARALGDRDRGRASVLLAHQPVVIDDAVEYGVGLQLSGHTHGGQLWPGNLLAELANPTVAGLERYGDTQLYVSRGAGAWGPPVRVGAPSDITVVELASPQ 248          
BLAST of mRNA_M-pyrifera_M_contig9747.22449.1 vs. uniprot
Match: UPI0004C80B56 (metallophosphoesterase n=1 Tax=Streptomyces albus TaxID=1888 RepID=UPI0004C80B56)

HSP 1 Score: 208 bits (529), Expect = 2.620e-59
Identity = 119/261 (45.59%), Postives = 154/261 (59.00%), Query Frame = 1
Query:  340 TQGIKD-PVVRTIEVPMANLPTCLDGYSLAMISDIHAGPTVGRAEIARHAEAINALGADAIVMVGDLVDDQVEDIGSIVEPIADFSAPDGQFFVLGNHEEYTREAKEWTKFVADRGFTVLEDTRVTLPPGAEAANDDCFFYLAGVSDYESS--------PDYSAALDGRDDGVATVLLAHQPTQVNEAADYSVGLQLSGHTHGGQMFPYHALAYLDQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLIVLRSPE 1095
            T G+ D P V+ + VP+  LP    GY +A++SDIH GP +GRA   R  E IN    D + +VGDLVD  V D+G   EP+A   + DG FFV GNHE Y   A +W  FV D G   LE+ RV LP           F LAGV+D  +         PD+  AL GRD   A+VLLAHQP  ++EA +Y VGLQLSGHTHGGQ++P   LA L    V+GL +  DT LYV+ GA  WGP +R+ + ++ T++ L SP+
Sbjct:  231 TLGVLDGPSVKRVTVPLTKLPRSAHGYRIAVVSDIHIGPVLGRAHTRRIVETINRTQPDLVAIVGDLVDGDVADLGRAAEPLAGLRSRDGSFFVTGNHE-YFSGAAQWVDFVRDLGVHPLENARVELPG----------FDLAGVNDPAAEREGAAGEGPDFGRALGGRDPARASVLLAHQPVVIDEAVEYGVGLQLSGHTHGGQLWPGEYLAALANPTVAGLERYGDTQLYVTRGAGAWGPPVRVGAESDITVVTLASPD 480          
BLAST of mRNA_M-pyrifera_M_contig9747.22449.1 vs. uniprot
Match: A0A7K3HFJ6_9ACTN (Metallophosphoesterase n=1 Tax=Streptomyces sp. SID5475 TaxID=2690301 RepID=A0A7K3HFJ6_9ACTN)

HSP 1 Score: 201 bits (512), Expect = 5.910e-59
Identity = 115/257 (44.75%), Postives = 151/257 (58.75%), Query Frame = 1
Query:  349 IKDPVVRTIEVPMANLPTCLDGYSLAMISDIHAGPTVGRAEIARHAEAINALGADAIVMVGDLVDDQVEDIGSIVEPIADFSAPDGQFFVLGNHEEYTREAKEWTKFVADRGFTVLEDTRVTLPPGAEAANDDCFFYLAGVSDYESS--------PDYSAALDGRDDGVATVLLAHQPTQVNEAADYSVGLQLSGHTHGGQMFPYHALAYLDQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLIVLRSPE 1095
            +  P V+ I VP+A LP    GY +A++SDIH GP +GRA   R  E IN    D + +VGDLVD +V D+G   EP+A   + DG FFV GNHE Y   A +W  FV + G   LE+ RV LP           F LAGV+D  +         PD+  AL  RD   A+VLLAHQP  ++EA  + VGLQLSGHTHGGQ++P   LA L    V+GL +  DT LYV+ GA  WGP +R+ + ++ T++ L SP+
Sbjct:   44 LNGPSVKRITVPLAKLPRSAHGYRIAVVSDIHIGPVLGRAHTRRIVETINRTRPDLVAVVGDLVDGEVADLGPAAEPLAGLRSRDGSFFVTGNHE-YFSGAAQWVDFVRELGVHPLENARVELPG----------FDLAGVNDPAAEREGAAGEGPDFGRALGDRDPARASVLLAHQPVVIDEAVKHGVGLQLSGHTHGGQLWPGEYLAALANPTVAGLERYGDTQLYVTRGAGAWGPPVRVGAESDITVVTLASPQ 289          
BLAST of mRNA_M-pyrifera_M_contig9747.22449.1 vs. uniprot
Match: A0A8J3Q9M7_9ACTN (Metallophosphatase n=1 Tax=Rhizocola hellebori TaxID=1392758 RepID=A0A8J3Q9M7_9ACTN)

HSP 1 Score: 204 bits (518), Expect = 7.920e-59
Identity = 110/246 (44.72%), Postives = 151/246 (61.38%), Query Frame = 1
Query:  352 KDPVVRTIEVPMANLPTCLDGYSLAMISDIHAGPTVGRAEIARHAEAINALGADAIVMVGDLVDDQVEDIGSIVEPIADFSAPDGQFFVLGNHEEYTREAKEWTKFVADRGFTVLEDTRVTLPPGAEAANDDCFFYLAGVSDYESSPDYSAALDGRDDGVATVLLAHQPTQVNEAADYSVGLQLSGHTHGGQMFPYHALAYLDQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLIVLRS 1089
            + P ++ I++P+A LP  LDGY + ++SDIH GP  G     R  EA+N+L AD I +VGDLVD  V ++     P+ D S+ DG FFV GNHE Y+    EW + + + G   L + R+ +  G +         LAGV DY ++PDY+AAL GRD     VLLAHQP  V +AA Y V LQLSGHTHGGQ+FP+H +    Q  +SGL + D T +YV+ GA  WGP +R+ +  + TL+ LR+
Sbjct:  139 RTPALKRIQIPLAKLPRSLDGYRIGLVSDIHMGPLTGVGRTRRIVEAVNSLNADLIAVVGDLVDGPVAELRDQALPLRDLSSKDGVFFVTGNHEYYSG-VDEWLREIVELGMRPLRNERLEIR-GLD---------LAGVDDYGAAPDYAAALSGRDPAKPVVLLAHQPVAVTQAAKYGVDLQLSGHTHGGQIFPFHFVVASQQPLLSGLAEIDGTKVYVTNGAGFWGPPVRVGAPNDITLVELRA 373          
BLAST of mRNA_M-pyrifera_M_contig9747.22449.1 vs. uniprot
Match: A0A8J3ZRG0_9ACTN (Membrane protein n=1 Tax=Virgisporangium ochraceum TaxID=65505 RepID=A0A8J3ZRG0_9ACTN)

HSP 1 Score: 204 bits (519), Expect = 1.500e-58
Identity = 120/266 (45.11%), Postives = 159/266 (59.77%), Query Frame = 1
Query:  307 VTFVTLVSVASTQGIKDPVVRTIEVPMANLPTCLDGYSLAMISDIHAGPTVGRAEIARHAEAINALGADAIVMVGDLVDDQVEDIGSIVEPIADFSAPDGQFFVLGNHEEYTREAKEWTKFVADRGFTVLEDTRVTLPPGAEAANDDCFFYLAGVSD-----YESSPDYSAALDGRDDGVATVLLAHQPTQVNEAADYSVGLQLSGHTHGGQMFPYHALAYLDQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLIVLRS 1089
            VT V  V    +Q +  P +  + VP+A LP  LDG  +A++SDIH GP +GR+   R  + IN +GAD + +VGDLVD  V ++G   EP+AD  A  G FFV GNHE ++  A EW   V   G  VLE+ RV +  G +         LAGV+D     YE +PD+  AL GRD     VLLAHQP Q  EAA + V LQLSGHTHGGQ+ P+ AL  L+Q  VSGL + D T +YV+ GA  WGP +R+ +  + +++ LRS
Sbjct:  157 VTSVVTVGYGVSQAMGPPRIDRVRVPLAKLPRQLDGLRIALVSDIHLGPLLGRSHTRRVVDTINGVGADLVAVVGDLVDGTVAELGEAAEPLADLRARFGSFFVTGNHEYFSGYA-EWIAEVDSLGLKVLENQRVEIE-GLD---------LAGVNDVTGEDYEHAPDFGKALGGRDPARPVVLLAHQPVQATEAAKHGVDLQLSGHTHGGQIQPFGALVRLEQPVVSGLGEVDGTKVYVTNGAGFWGPPVRVGAPPQISVVELRS 411          
BLAST of mRNA_M-pyrifera_M_contig9747.22449.1 vs. uniprot
Match: UPI000AB914EE (metallophosphoesterase n=1 Tax=Streptomyces nanshensis TaxID=518642 RepID=UPI000AB914EE)

HSP 1 Score: 199 bits (507), Expect = 6.970e-58
Identity = 110/254 (43.31%), Postives = 149/254 (58.66%), Query Frame = 1
Query:  349 IKDPVVRTIEVPMANLPTCLDGYSLAMISDIHAGPTVGRAEIARHAEAINALGADAIVMVGDLVDDQVEDIGSIVEPIADFSAPDGQFFVLGNHEEYTREAKEWTKFVADRGFTVLEDTRVTLPPGAEAANDDCFFYLAGVSDYESS-----PDYSAALDGRDDGVATVLLAHQPTQVNEAADYSVGLQLSGHTHGGQMFPYHALAYLDQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLIVLRSPE 1095
            +  P ++ + VP+A LP    GY +A++SDIH G  +GR+   R    IN+   D + +VGDLVD  V D+G   EP+    + DG +FV GNHE Y  +A EW   V + G   LE+ RV LP           F LAGV+D         PDY  AL  RDD  A+VLLAHQP Q++E+ +Y V LQLSGHTHGGQ+FP+HA+  L    V+GL +  DT LYV+ GA  WGP +R+ +  + T++ L S +
Sbjct:   73 LNGPTLKHVTVPLAKLPRSAHGYRIAVVSDIHLGAVLGRSHTERIVRTINSAQPDLVAIVGDLVDGTVADLGPAAEPLRGLRSRDGSYFVTGNHE-YFGDADEWVDHVRELGVHPLENARVELPG----------FDLAGVNDVSGEDSGEGPDYEKALGDRDDSRASVLLAHQPVQIHESVEYGVDLQLSGHTHGGQIFPFHAVVALANPTVAGLDRYGDTQLYVTRGAGAWGPPVRVGADPDVTVVRLASKQ 315          
BLAST of mRNA_M-pyrifera_M_contig9747.22449.1 vs. uniprot
Match: UPI001FFDC8F2 (metallophosphoesterase n=2 Tax=Streptomyces sp. F63 TaxID=2824887 RepID=UPI001FFDC8F2)

HSP 1 Score: 204 bits (519), Expect = 7.900e-58
Identity = 117/256 (45.70%), Postives = 151/256 (58.98%), Query Frame = 1
Query:  349 IKDPVVRTIEVPMANLPTCLDGYSLAMISDIHAGPTVGRAEIARHAEAINALGADAIVMVGDLVDDQVEDIGSIVEPIADFSAPDGQFFVLGNHEEYTREAKEWTKFVADRGFTVLEDTRVTLPPGAEAANDDCFFYLAGVSDYESS--------PDYSAALDGRDDGVATVLLAHQPTQVNEAADYSVGLQLSGHTHGGQMFPYHALAYLDQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLIVLRSP 1092
            +  P V+ I VP+A LP    GY +A++SDIH GP +GRA   R  EAIN    D + +VGDLVD  V D+G   EP+A   + DG FFV GNHE Y   A +W  FV D G   LE+ RV LP           F LAGV+D  +         PD+  AL  RD   A+VLLAHQP  ++EA ++ VGLQLSGHTHGGQ++P   LA L    V+GL +  DT LYV+ GA  WGP +R+ + ++ T++ L SP
Sbjct:  236 LNGPSVKRITVPLAKLPRSAHGYRIAVVSDIHIGPVLGRAHTRRIVEAINRTRPDLVAVVGDLVDGDVADLGRAAEPLAGLRSRDGSFFVTGNHE-YFSGAAQWVDFVRDLGVHPLENARVELPG----------FDLAGVNDPAAEREGTAGEGPDFGRALGDRDPARASVLLAHQPVVIHEAVEHGVGLQLSGHTHGGQLWPGEYLAALANPTVAGLERYGDTQLYVTRGAGAWGPPVRVGAESDITVVTLASP 480          
BLAST of mRNA_M-pyrifera_M_contig9747.22449.1 vs. uniprot
Match: UPI000687A47C (metallophosphoesterase n=1 Tax=Hamadaea tsunoensis TaxID=53368 RepID=UPI000687A47C)

HSP 1 Score: 201 bits (511), Expect = 1.830e-57
Identity = 119/266 (44.74%), Postives = 155/266 (58.27%), Query Frame = 1
Query:  322 LVSVAS-----TQGIKDPVVRTIEVPMANLPTCLDGYSLAMISDIHAGPTVGRAEIARHAEAINALGADAIVMVGDLVDDQVEDIGSIVEPIADFSAPDGQFFVLGNHEEYTREAKEWTKFVADRGFTVLEDTRVTLPPGAEAANDDCFFYLAGVSD-----YESSPDYSAALDGRDDGVATVLLAHQPTQVNEAADYSVGLQLSGHTHGGQMFPYHALAYLDQGYVSGLHKKDDTFLYVSEGAVGWGPRMRLLSTTEYTLIVLRS 1089
            LVSVA+     TQ +  P ++   + +A LP  +DGY +A++SDIH GP  G A   R  + IN L AD + +VGDLVD  V  +G   EP+    + DG FFV GNHE Y+   +EW   VA+ G   L + R+ LP G +         LAGV+D     Y  +PDY+ AL  RD   A +LLAHQP QV EAA Y V LQLSGHTHGGQ+ P++ +  L Q  VSG    D T +YV+ GA  WGP +R+ +  + TLI LRS
Sbjct:  147 LVSVATVGYGMTQALGAPRLKRRAITLAKLPRAMDGYRVALVSDIHLGPISGHAHTQRIVDTINRLDADIVAVVGDLVDGSVAQLGHAAEPLRGLRSRDGAFFVTGNHEYYSGY-EEWITEVAELGMRPLRNERIALPGGLD---------LAGVNDRTGGAYGDAPDYAKALADRDPAKAVILLAHQPVQVREAAKYGVDLQLSGHTHGGQLAPFNYVVKLQQPVVSGYDTIDGTQIYVTNGAGFWGPPVRVGAPPDITLIELRS 402          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9747.22449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTK3_ECTSI3.120e-19674.34Metallophosphoesterase n=2 Tax=Ectocarpus TaxID=28... [more]
UPI0017BE25918.640e-6045.31Metallophosphoesterase n=1 Tax=Hamadaea sp. TaxID=... [more]
A0A2V2PZV5_9ACTN1.220e-5944.49Metallophos domain-containing protein (Fragment) n... [more]
UPI0004C80B562.620e-5945.59metallophosphoesterase n=1 Tax=Streptomyces albus ... [more]
A0A7K3HFJ6_9ACTN5.910e-5944.75Metallophosphoesterase n=1 Tax=Streptomyces sp. SI... [more]
A0A8J3Q9M7_9ACTN7.920e-5944.72Metallophosphatase n=1 Tax=Rhizocola hellebori Tax... [more]
A0A8J3ZRG0_9ACTN1.500e-5845.11Membrane protein n=1 Tax=Virgisporangium ochraceum... [more]
UPI000AB914EE6.970e-5843.31metallophosphoesterase n=1 Tax=Streptomyces nanshe... [more]
UPI001FFDC8F27.900e-5845.70metallophosphoesterase n=2 Tax=Streptomyces sp. F6... [more]
UPI000687A47C1.830e-5744.74metallophosphoesterase n=1 Tax=Hamadaea tsunoensis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9747contigM-pyrifera_M_contig9747:836..10499 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score562.4
Seed ortholog evalue1.6e-157
Seed eggNOG ortholog2880.D8LTK3
Preferred nameTMPPE
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.Calcineurin-like phosphoesterase
EggNOG OGs2QRHG@2759,COG1408@1
Ec32 ortholog descriptionMetallo-dependent phosphatase-like
Ec32 orthologEc-28_003760.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1098
Cds size1098
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9747.22449.1prot_M-pyrifera_M_contig9747.22449.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9747 836..10499 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816891.4628665-CDS-M-pyrifera_M_contig9747:835..9691622816891.4628665-CDS-M-pyrifera_M_contig9747:835..969Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 836..969 +
1692278239.5520744-CDS-M-pyrifera_M_contig9747:835..9691692278239.5520744-CDS-M-pyrifera_M_contig9747:835..969Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 836..969 +
1622816891.4743285-CDS-M-pyrifera_M_contig9747:3024..32681622816891.4743285-CDS-M-pyrifera_M_contig9747:3024..3268Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 3025..3268 +
1692278239.5682733-CDS-M-pyrifera_M_contig9747:3024..32681692278239.5682733-CDS-M-pyrifera_M_contig9747:3024..3268Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 3025..3268 +
1622816891.4856808-CDS-M-pyrifera_M_contig9747:3958..40511622816891.4856808-CDS-M-pyrifera_M_contig9747:3958..4051Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 3959..4051 +
1692278239.579425-CDS-M-pyrifera_M_contig9747:3958..40511692278239.579425-CDS-M-pyrifera_M_contig9747:3958..4051Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 3959..4051 +
1622816891.5013287-CDS-M-pyrifera_M_contig9747:4814..49651622816891.5013287-CDS-M-pyrifera_M_contig9747:4814..4965Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 4815..4965 +
1692278239.5978105-CDS-M-pyrifera_M_contig9747:4814..49651692278239.5978105-CDS-M-pyrifera_M_contig9747:4814..4965Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 4815..4965 +
1622816891.514575-CDS-M-pyrifera_M_contig9747:5803..58801622816891.514575-CDS-M-pyrifera_M_contig9747:5803..5880Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 5804..5880 +
1692278239.6062849-CDS-M-pyrifera_M_contig9747:5803..58801692278239.6062849-CDS-M-pyrifera_M_contig9747:5803..5880Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 5804..5880 +
1622816891.5262625-CDS-M-pyrifera_M_contig9747:7537..77021622816891.5262625-CDS-M-pyrifera_M_contig9747:7537..7702Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 7538..7702 +
1692278239.614724-CDS-M-pyrifera_M_contig9747:7537..77021692278239.614724-CDS-M-pyrifera_M_contig9747:7537..7702Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 7538..7702 +
1622816891.5392637-CDS-M-pyrifera_M_contig9747:9351..94501622816891.5392637-CDS-M-pyrifera_M_contig9747:9351..9450Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 9352..9450 +
1692278239.6228936-CDS-M-pyrifera_M_contig9747:9351..94501692278239.6228936-CDS-M-pyrifera_M_contig9747:9351..9450Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 9352..9450 +
1622816891.5510614-CDS-M-pyrifera_M_contig9747:10364..104991622816891.5510614-CDS-M-pyrifera_M_contig9747:10364..10499Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 10365..10499 +
1692278239.6318662-CDS-M-pyrifera_M_contig9747:10364..104991692278239.6318662-CDS-M-pyrifera_M_contig9747:10364..10499Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9747 10365..10499 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9747.22449.1

>prot_M-pyrifera_M_contig9747.22449.1 ID=prot_M-pyrifera_M_contig9747.22449.1|Name=mRNA_M-pyrifera_M_contig9747.22449.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=366bp
QVRLLRAAFVLVYMTIYGITISSLVFEQTVSTTNGKDPHPWMYFSFQWAG
GFVLLLVSAWFVDIFLMTFRVLKWCWRRFLLGAREKGEKFTFPLWAFPLL
WLVTFVTLVSVASTQGIKDPVVRTIEVPMANLPTCLDGYSLAMISDIHAG
PTVGRAEIARHAEAINALGADAIVMVGDLVDDQVEDIGSIVEPIADFSAP
DGQFFVLGNHEEYTREAKEWTKFVADRGFTVLEDTRVTLPPGAEAANDDC
FFYLAGVSDYESSPDYSAALDGRDDGVATVLLAHQPTQVNEAADYSVGLQ
LSGHTHGGQMFPYHALAYLDQGYVSGLHKKDDTFLYVSEGAVGWGPRMRL
LSTTEYTLIVLRSPEV
back to top

mRNA from alignment at M-pyrifera_M_contig9747:836..10499+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9747.22449.1 ID=mRNA_M-pyrifera_M_contig9747.22449.1|Name=mRNA_M-pyrifera_M_contig9747.22449.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9664bp|location=Sequence derived from alignment at M-pyrifera_M_contig9747:836..10499+ (Macrocystis pyrifera P11B4 male)
CAGGTCCGCCTCCTTAGAGCAGCTTTCGTTCTGGTGTACATGACGATCTA CGGCATCACTATATCCTCTCTCGTGTTCGAGCAGACGGTATCCACAACAA ACGGCAAGGACCCGCACCCCTGGATGTATTTCAGGTGAGAAAGTAACCGT TTTTTTTGGGGGGGGAGGCAACCAATCATATCTCAGGCTCTACAGAGGCA GGGTAACGTCTAAACCACCCAACCGATGGTAAGGAGTTTAGGATCGGGAG GTATCAGGATGTTTGCGAAGATTTCGGTTGTAACCAACTCGGCTGTTTCT TTTGTGGTCTATTTCCCACATTAAAATGATCCCAGCCCGGAGAAACTTGA GGATCTTCCGGAGGCTGTGGCAAAAAGTGGCCAAAATGCCGCGTAGCACC TTATTATGATTGGGTTGGGTTTTAAATAGTACGGGGGGCCATAGTAAACA GAACATGCGGCACACACAAAAACCTATGTACTTTACCTGTTTTTACTAAC AATAGTTGGTCCTATTTACTATGGTGCCCCGTAATAGGAAAAGGTTGCTT GCATGGGTTGGAGTCGTTTCGCATGGAGGAAAACAGACTACAAGAAACCC GCCTCAGAAATGGTTCCAACCAATCCGTTCGCAGACACCGTAATGGCAAG GTGTCCGGTCGGCTCTCCCGCGGGGCTCGGGCACTTCGCTCCCTGTTTCA CGCCATTGCGGCCTAGTCCGGGGGAATACGTCATAGTAGCCTCAGAGCCG AAACATGGTGTTACTTCGGCGCCCGCGGCCTGTGCCACGTATGAATCGCT CCACCTCCGATGTCGCCTTTGCCCTCGCCGAAAACAATTCCCCGACTCGC CGCCCAGCGATGAATCAGAAATCACGACGTATAATTGGCCCGGCGAGCGA CCGCTGTCCAGCCGCAAGCAACAGCCCTGTCTGTCTTGTCTCTGTCGGTC TGTCGGTCTGTCGGTCTGTCGGTCTGTCTTGTCTGTCTGTCTGTTCGCGC GTTCTACCGGTCTGCCGGCACCGTTCCGTGCTGTGTCCACATTGGGGTCC CCACAGGCGCGACCAGGCAAACGATGCCGGTTGTTGCTGTGACAGTCGAT ACGTGATCTTTGGGTCCCGTCGTGGGTGCTGATTATCGTGCCCTCCTGTG ATCGGAAACACTTTCTATCAATAGTGGCGGGAGGCATTTTTGGAGTAGGG TCAAGGTACGGACATAGACCCGGCCCTAACTGACCCTAACCGTAACCTTG ACCCTGACCCTGACCCTGACCCTAACCCTAACCCTGACCCTGACCCTTAC CCTGACCCTGACCCCCAAGCTACAGTAGACCCTAACCGGGTCAGAAACGC GGCTGCGCAGCGTTTTTCTTTTCTTCAAAATTGTTCACGCTTCGTACCGT ACATGTCATCGATTTGCCACTTCACGATTGAGATATTTCAAGCCAGATAT ATACCTGTATATATATTTATCCTCCGGCGGATATATATATACATATATAT ATATATTCCTGATCTGCATGATCTGTGTGATCTAGCTCATTTGTCCGGGT GGAACCCGTATAATATACGTATATATACGTATGTACCTGGTGTAATATTT TTGCACATGTTTTTGCCGGGTTGGATCTGCCATATAAGGCAGATACTGCG CGGCCTCTCACAACGACGAATGAGAAACTAACTCAATAGATGATCTACTG CCAATAGATAGATAGATCATGATCGGTCTGAGTGTTGAACTATTCCGAGC TGCGGACCATGATTGACCTCCTGACACTGAACTCCTAGTGAGTTGAATTT TCTAGGATTTTTTCCGTCCGACCACTCCGGTAGTACCACTTGTTGTACTA CGGTAGTGGTGTGAGCGAGCGGCAGCACGCGTTGAGCAAACACATCTGGG ACGTGTGGATCTGACCGATATGTTGGAAAGCGATCTGGGGCGTGTAGATC TGGCCCATATATTGATTGCTGTGCGCCTTGCTTCAAACCGGATACCTTTT TTTTTCCTTTCTGTTTTTTTTTTAATCCGCCCATGTCTCTATACCCGTTT TGTCCTTCTTTTCATGTCTGTATTTCCTTGCTCTGTGTTCGATAAAAACA CAAATGTAGATGAAAAAAATCGAACAAGTCTTTTTATTCTTTTTTTTTAA GCTGTCGTGGTAATCGTTTTTGCCTCTAATATGCCGCAGCTTCCAGTGGG CCGGAGGTTTCGTGCTGCTCCTCGTATCCGCCTGGTTCGTCGACATATTT CTGATGACCTTCCGCGTTTTGAAGTGGTGTTGGAGGCGTTTCCTGCTCGG GGCGAGGGAGAAGGGGGAGAAGTTCACCTTCCCTCTTTGGGCGTTTCCTC TGCTATGGCTCGTCACCTTCGTGACGCTCGTGTCTGTGGCTTCCACGCAG GGCATTAAGGATCCCGTCGTGCGGACAATTGAGGTGAATTAATTAATCCA TCGTTTTAATTTTATTTCCATTTTTTTTTACTGTCTTTTGTTTTCTTCTT TTCTTTTCGCGGTTGGTGACTTGCGTGTATTTTTCTGTGTTGACCGACGT GGAAGTGAGTCAATTGTTTCTTGATGCAAACAAAGACGTAAGGTTAATCT CTGGCTTTGAAGATTTAGCCGCAATGGTTGGCGAAGAAATTTCACCATTT CGTACCAAGTAGAGTTTATTCATACCCGGAGAACAAGGCGCAGTGTCGTA CAGATGTCACCATAGATGGCGCAGATCTAGTATGTCAGGTATATATCTGT ATGCCCCGACAGATGTGGAGGGTGCTTTGGGGATCTGGTCTGATCTGATC TGATCTTATCTGATCGGTCCTTCCTCCTAGGCTGATGTGATCGGTCCTTT CTCTGATCTTATCTGATTAGTCATTTCTCTGATGTGATCTGATCGGTCCT TCCTCTGATCTGATCTCATCTGATCGGCCCGTCTTTTAATCTGAGATATG ATTGACCCTTTCTCTGATCTGGTCCGATTGCGCCCTCACTTCGACCTGAT CTGATCAGCCCTTCCCTTGGTCTGATTTGGTTTGTCCATCCTCTGATCTG ATTTAATCTGATCTGATGTGTCTTTCTTCTGATGTGAACTGAACTGATGT GTATCTCCTCTTATCTGTCCCAGGTGCCGATGGCAAATCTACCCACGTGT CTGGACGGTTACAGCTTGGCCATGATCAGCGACATCCACGCGGGGCCGAC CGTCGGCCGAGCCGAGGTGAGGCGATGGTGCAGCACACATTGGATCAGAT CACGATCTAGTTCATTTAGATGATTTAGATCATCACGATCTACGATGTAT CATGTATAGTTAGTACTCGCCTCTGACCTCTACAGGACGGACTGCACTCT CGTATTGGAGAACACATTACTTGCGATTAGCGTTAGACACACGTTAAAAG AGGCACCGTGCACTACTAAAAAGTAAAAGGGTTGAGAGGTGTAACAGGAC ATCTTATCGCGCCGACCGTTAATAGCGTCTCGGGAGGGCGGGGGGGGGGA GGGGGGGGTCGTTTCAGTTCGCGAGACATGTATCGGCGACCATCAACGCC GAGATAGGCTGCACTTTTTGTCGAAGTTTTGAGTATCGTATCACGATTGC CGTCCGACACAACGACAACATACGTGCTCTGTTAATGATCATCGCGGTTG CAAGACGACAAACAGATAAAACACAGCTCCTAGATAGAAAGGTCACCATG AGAAACAGACACGATTAACAGTTGGGTGAGATATCTATACGATTAATGAA AAAAAACAAACAAACTGTTCTGGTTGCATCACACCTTGCCAATGTATGTG TACTTACGATATGAACCCCCCGTGTTTTGGGTCTAAAAAGACATTATCGT TTTTTTTGTTGTTGTTGCAGCGTATCCCTGATACAAGCACTTTTTCCTCA TGGTGGGAATGTCGAACGTGCCGATCGTGCAAAAAAAAAACATGTCGTTT GAGACCGGGGTTCATTGTTTTTGTTTCAGATCGCGAGGCACGCGGAGGCG ATCAACGCCCTCGGGGCGGACGCTATCGTGATGGTGGGGGACCTCGTCGA CGACCAGGTGGAGGACATCGGCTCGATTGTCGAACCCATCGCTGACTTCA GCGCTCCGGACGGGCAGTTCTTCGTCCTAGGTTAGTTCGGAGGGGGCGTT TTTCGGTAGGGGTAAGAGCTGGCTCCAGCAAGATGCACATCAATGATGAA TACTGGTACGCGCCACGTGAGCGATGGAATCTAGCGAGGATCGAGCTCGA GTGTGTGTGTGTTATTGAATTTTAGTGTAAAAAAACGGCATTAGATTTCG GGACATAGTGGTGAGCCCGAAACACTTTCGAATATCGACAGGACAGGTTT TTTATTACGGAGGACCATAGTAAATAGGACCTACGGTACACTTAAAAACC TATATATTTACCTATTTTTGCTCACAATATTTGGTCCCATTTACTATAAT CCCCCGTAATAGTGGTATTTGAGTGATGCTGGGTGCCTGTAGTTCGGGAG TGAGGAGCCCGACGGTCGCAGATAGTTTGACCACAAAGCGCTGCCCCATT ACCTGCCGTGGGCCGTAGCACCTCTTGGAGGCCTTCTGCGACGAGGTCAA CAACGGACAACACCAGTAGTAACAACAATCAACCAACAACAACCAACCAA CAACAACCGACCACAACAACCAACCAACAATATCCGACAACATACAATCA CAACAACCAATAACATCCACAACAACAACAACAGCCAACCAACAACAACC GACCACAACAACCAACCACGACAACCAACCAACCACAACAACCAATAACA TCCACAACAACAACAACACCACCAACAACAAATAACGTCCACAACAGCTA CAACAGCCAGCAGTCACAACGACCACTAACATAACAACAAAAATCATAAG AAGTTGCTGACCGTCAGCTTCAACGCGACGCGTTCATGTGCGGTGCCGCA TCGTGCTCTCTGCTCCAGGCAACCACGAGGAGTACACGCGCGAGGCTAAG GAATGGACGAAGTTCGTAGCCGACCGGGGCTTTACGGTGCTGGAGGTGAG CTTTTGCGCACTCTACGGTACAGCCTTGCCGACGCGTAGCACGATAAAGG TCGTAGCATTTTTTTTTTTCCCGGCGATATCATTTCTAGCCGACGGAGCT ATTAATATTAATAGCTCCTTTTGTTCACTGAAAACACTACCCGAGATAAT CGAATCCCGTCATTTGTCTTCCAAGATTATTCGTTTCTTGACGGGAGCCA TTGGAGACAAATAGATGAATACACAAGGTGTCATTCTTTTTGGGTGGTTT ACTATTTGTATTACGGGGGACCGTAGTAAATAGGACGTACGGTACTCACA AAAACCTATATATTTCGCCTTTTTCCCAGAAATATTTGGTCCTATTTACT ATGGTCCCCCGTAATAGCACAGGCTCCCCTCCAGTGCCCCACCATTGTGA GGCATTGCTCAGAAAATAAGGCACCACCGATAAAATGCGTCGGTCAGGTG CTACATACCCCTATGGCCTACCGGAGCATGGCATGGCATGGCATGGCGTG CATTGCGTGCCAAGATAAGATTGGCGCCATCCTCCGAGTGGTCGCCCCGA TGCTCTCCCCGCAGAAAGTAGAACGCTTGCGTTGTTGCTCGTTTATACAT GTACGCAAGAGTATAGCTTCAACTATGCGCTCGTTTGGGCTGGTCGGTGT TGCGTGCCCGGTTGCTTGTGGAACTAGAGCGGACTCGTTTTGGGGCTGGT CGGTGTTGTCACCTTTTCACCGGTTACTTGCCCGATGGCTGCACGCTTCT TTTTTTTTCTTGAGGTTTATTTTAGATTTTTTGCTTCGTTTTATGTTGCT CGTTCGTGCCCGGTGGCTACGGACGAGTAGCGGGTACTACGAGAAACAAG CGCCTGCTGCCGTGTCCTCCCTTTCAGCTTGCGGCACGCCCGGAATTTCA AGTGATGGAACCACAATCATCCCGAAGAGGAACATTATTGCACCTTATAA TAACACGGGTGATGACATGCCACACCCACCGCCGGGGAAGATTTTCGGCG CCAATTTTCTCCAAAACATGCCTTAAGGCCTCAAGGGGCGCACACAACGA AAATGTTGAGTTTGGAAAGGTCTCGTCGAGTTTGCTTTCGTAGATGCGTC GCTCGGCGTTTACGCTCTCCACCGTTGTCAAAACAAATAGCTACAGTCTC AGTGGCATTGATGTAAGGGTGGGTCCTGTGTCAAGTGTTGCACGGCATAT GCTGGGATTCGCGATCACCTCGATTCACAAGATAAGGCTGCGAAGGAATC AGCAGCTAAGCTGATGATTCGGTTTTCACGTTTGTTTTGGATTGTTTTGG TGTGTGTGTGTTTTTTTTTCGTTTTCGTCTTCGCTTTTTCGTTGTTGTGT CATCGCGTTTGTTTGCTTTTTTGTTTTTTTAGCGCTTTTTTTGCATGTAT TGTCAAATGTGTTTTTGTTCTTTCGCTGTCCTTTGTTTTCTTCGTTTTCA CGGATTTTTTTGCGTTTGCGGTGTTGTTTATTGTGTCGTGTTTTGTGCAT TTATATTTTTCAGTGTTTATGGTTTTGTTTTCTTTTGTTGTGTTTGTGTT TTTGGTATGCGCTGCGTTCGTGCTTTATTTTGTCTTCTTTCTTTTCCTGA CGTTAGACGACCACTCACCCACCCACCCACCCCCCTCCGAATCCTACCTC AGGACACGAGGGTCACCCTGCCGCCGGGGGCAGAGGCGGCTAACGACGAC TGTTTCTTCTATCTAGCCGGGGTGAGCGACTACGAGTCCAGCCCAGACTA CTCCGCCGCACTGGACGGAAGAGACGACGGTGTGGCTACTGTCCTCTTAG CCCACCAGCCCACCCAGGTAAGGCCTCCATACCTTAGAGGGCACAATATG CATTCGCTGTAACCAGGCATGTGCTATCTATAGGAGCAATGCCACATTAG AGGGGTGGTGCCTCATCTCCTGAGCTCTCGCCCGAAACATAGCTTCAAAT AACTTTTTTTTTCGCGCAAAACCCTGAAAAAAACAATCGCAGCCCTGGAG AAAATATTTTCGTGTACCACTTAGTTACTAGACCTTCTCATGGGCGCGAT CGGTATGCGTTGGTATGAGTTGCATGGCTTGTGTGCGCTATATGTGCTGT AGTGGTATAAAAATGTGTGCACTGTATGCTGTACGAGATGTGCGCAGTTC AACGCGAGTCGACGAGGGAACACCGGGCTTGAAAGTCTTCTCGCGACAAA AAAAATACAAGGCACAAACCGTGGTGGGGAGGGGGGAGGAGGGTCTACTA CTGTGTGCCCCCGAATCTGAGTTACGATAGCAGTAGGAGGGAGAGAGAAA ATATGGACGAAGATGATAGATGGAACATAAATCGATGGTGGCATTATTAG TGGGGAAACTATGCGATGATGGGGGTGAACCTGATTTTTCCGAGGCTCCT GACTTGAGGAGGGTCTGTGCCTCACCCAAGACTGACCCTGAGAAACAACG AAAGTGGAACACGATGGGAAATCCCTCCCATGCCATTTCTAAGTACTACG GAGGTCCGTAGTTAATAGGACCTACGGTATACATAAACAAAAAACCTACC AGTATATTTTAACCTATTTTTACTATTACGGGGGACCATAGTAAATAGGA CCAATTATTGTTAGTAAAAAAAGGAAAATATATAGGTTTTTATGTATACC ATAGGTCCTATTAACTATGGCCCCCCGTAATACTGTTGCAGTCCCCAAAA CGGGACTGTAATGCCGTGAAGAAAGTTAATGATACTCCAGCGATGTTATT ACTAGTATGTGTTAATACTGCCTCAGTGAAGGAGCCTCCTCGATCAGAAG TATGTCGGCCAAAAAAGTGCTATATGTATTGTTGGTGTTGGTGGCGCGCG TGATGCGCGTCATGTATGTATGTTTGTTCTTGTTTCGTGTGCGTTGCGTT TTTTTTCTCGTTTTTTGTTGCGACGTCGTGGCCACACCGTCCTCGTTTTG GCCCACCAGCGCAACCCAGGTTGACGCTTCGTTGTGGGTATATTCTTCAT GTGTGTGTGTGCTGTGTTTGTTGTATGTGCTGTACGAGCTGTATGCGCTG CATGTGCTGTGTTTGTTGTATGTTATGCATGTGATGCATGTGTCGTATGC GCCGTATGCACTGTATGTGCTGTGTTTGTTGTATGTGCTGTATGCGCTGT GATGTGTGCGCGTGGTGCGCGGTATGTGCTCTACGCGCTGTTTATTGTCG AGATGCGCCCCCGCCCTTTCACCTTCATGCGACTCGCCCACACCTCACGT TTCGCTTTGCGCTTGGTGCAAGCGATGTCTGCCTGGTCGGTGAAAACCCG ACGGGCTCCGTCCCGGCACTGCAGGGATGCGAGGGTCTATGGTCATACGA CTACGGCCATGCATGATATCGGGTACGCCCCCCCCCCCCCCATCCCACAT ATCGTGTTGTGGACTAATCCCCTCGCCCCCTGTCGAACCACCCCCCCGGT TATGATGCAATTTTAGGTGAATGAAGCGGCCGACTACTCGGTGGGGCTGC AGCTTTCCGGCCACACGCATGGAGGGCAGATGTTTCCCTACCACGCCCTG GCCTACCTGGACCAGGTCAGTGCTTTTTGCGGCCGATTTTGAGCAGTAGC TTAGGGCAGTAGCTTTCAGCAGTAGGGTTGTGCAGTAGCTGTTTTTGAAC AGTAGCTTTAGGCTGTAGTCTTGGGCAGTATGAGTAGGCGGTGGCATTAA GCAGGAGCGTTGGGAGGTGGCGTTGTGCAGTAGCAATGGGTACTATCGTT AGACAGTGGCTTTGGGCCGCGGCCTTGGGCGGTCGGCGTGGGCAATGTCG CTTGACAGTAGCGTCGGACAGTAGCGTTGAACAACAGCGTTGGCGCAGTA GCATCGATAATTGCTTTTTTTCGCTAAAAAAGGGTATCCAGGGCGTTTCG CTGTTCACGGCGCCGCTGTATGACCCATGTATTGGTACAATTCTACTGAC TTGAACGGTCTGATCAATTATACCTGGTATTAATTAATTGCTTGAGCTAC GAAGTGTGGGTTAGAGTTCTGCCGGTGAGGGACACGATATATATATGATA TATACCTGGTACATATTATCCTCACTTTTACTTTCCAGCAGCTGGACAGG CGGTGGTCACAGGTGTGGTCCCTTCCCCTCCCCAGCATGTACGTGCCTTC GTTTTTATCACTCATAGGGTTCAGCATTCCCACTGCTCGTTGATTCTCAT CGAATGCCGCTATTACGGGTGACCATAGTAAATAGGACCTACGGTACACA CTGAAACCAATACATTCCCCTATTTTTTCTAATCATATTTGGTCCTGTTT ACTATGGTCCCCTCACGCTGTCGCACTTACGTGCACATCAAAGCCTTTCA TCACTGTCGTTCGTTTTATGCCAACATGGCCCGATTCAAGTCTATTTTTA TATGTGCTAAATACGCCCCCCCCCTAAAAAAACACGCCTTCCTTTCTCCC CGTATCGCTGCCCCGATTTCTTGCGACAGGGGTACGTCTCGGGTTTGCAC AAGAAGGATGACACATTTCTATACGTATCGGAGGGGGCGGTGGGCTGGGG GCCCCGCATGCGTCTCCTTTCCACGACGGAGTACACTCTTATCGTACTCA GATCACCCGAGGTA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig9747:836..10499+

>mRNA_M-pyrifera_M_contig9747.22449.1 ID=mRNA_M-pyrifera_M_contig9747.22449.1|Name=mRNA_M-pyrifera_M_contig9747.22449.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2196bp|location=Sequence derived from alignment at M-pyrifera_M_contig9747:836..10499+ (Macrocystis pyrifera P11B4 male)
CAGGTCCGCCTCCTTAGAGCAGCTTTCGTTCTGGTGTACATGACGATCTA
CGGCATCACTATATCCTCTCTCGTGTTCGAGCAGACGGTATCCACAACAA
ACGGCAAGGACCCGCACCCCTGGATGTATTTCAGCAGGTCCGCCTCCTTA
GAGCAGCTTTCGTTCTGGTGTACATGACGATCTACGGCATCACTATATCC
TCTCTCGTGTTCGAGCAGACGGTATCCACAACAAACGGCAAGGACCCGCA
CCCCTGGATGTATTTCAGCTTCCAGTGGGCCGGAGGTTTCGTGCTGCTCC
TCGTATCCGCCTGGTTCGTCGACATATTTCTGATGACCTTCCGCGTTTTG
AAGTGGTGTTGGAGGCGTTTCCTGCTCGGGGCGAGGGAGAAGGGGGAGAA
GTTCACCTTCCCTCTTTGGGCGTTTCCTCTGCTATGGCTCGTCACCTTCG
TGACGCTCGTGTCTGTGGCTTCCACGCAGGGCATTAAGGATCCCGTCGTG
CGGACAATTGAGCTTCCAGTGGGCCGGAGGTTTCGTGCTGCTCCTCGTAT
CCGCCTGGTTCGTCGACATATTTCTGATGACCTTCCGCGTTTTGAAGTGG
TGTTGGAGGCGTTTCCTGCTCGGGGCGAGGGAGAAGGGGGAGAAGTTCAC
CTTCCCTCTTTGGGCGTTTCCTCTGCTATGGCTCGTCACCTTCGTGACGC
TCGTGTCTGTGGCTTCCACGCAGGGCATTAAGGATCCCGTCGTGCGGACA
ATTGAGGTGCCGATGGCAAATCTACCCACGTGTCTGGACGGTTACAGCTT
GGCCATGATCAGCGACATCCACGCGGGGCCGACCGTCGGCCGAGCCGAGG
TGCCGATGGCAAATCTACCCACGTGTCTGGACGGTTACAGCTTGGCCATG
ATCAGCGACATCCACGCGGGGCCGACCGTCGGCCGAGCCGAGATCGCGAG
GCACGCGGAGGCGATCAACGCCCTCGGGGCGGACGCTATCGTGATGGTGG
GGGACCTCGTCGACGACCAGGTGGAGGACATCGGCTCGATTGTCGAACCC
ATCGCTGACTTCAGCGCTCCGGACGGGCAGTTCTTCGTCCTAGATCGCGA
GGCACGCGGAGGCGATCAACGCCCTCGGGGCGGACGCTATCGTGATGGTG
GGGGACCTCGTCGACGACCAGGTGGAGGACATCGGCTCGATTGTCGAACC
CATCGCTGACTTCAGCGCTCCGGACGGGCAGTTCTTCGTCCTAGGCAACC
ACGAGGAGTACACGCGCGAGGCTAAGGAATGGACGAAGTTCGTAGCCGAC
CGGGGCTTTACGGTGCTGGAGGCAACCACGAGGAGTACACGCGCGAGGCT
AAGGAATGGACGAAGTTCGTAGCCGACCGGGGCTTTACGGTGCTGGAGGA
CACGAGGGTCACCCTGCCGCCGGGGGCAGAGGCGGCTAACGACGACTGTT
TCTTCTATCTAGCCGGGGTGAGCGACTACGAGTCCAGCCCAGACTACTCC
GCCGCACTGGACGGAAGAGACGACGGTGTGGCTACTGTCCTCTTAGCCCA
CCAGCCCACCCAGGACACGAGGGTCACCCTGCCGCCGGGGGCAGAGGCGG
CTAACGACGACTGTTTCTTCTATCTAGCCGGGGTGAGCGACTACGAGTCC
AGCCCAGACTACTCCGCCGCACTGGACGGAAGAGACGACGGTGTGGCTAC
TGTCCTCTTAGCCCACCAGCCCACCCAGGTGAATGAAGCGGCCGACTACT
CGGTGGGGCTGCAGCTTTCCGGCCACACGCATGGAGGGCAGATGTTTCCC
TACCACGCCCTGGCCTACCTGGACCAGGTGAATGAAGCGGCCGACTACTC
GGTGGGGCTGCAGCTTTCCGGCCACACGCATGGAGGGCAGATGTTTCCCT
ACCACGCCCTGGCCTACCTGGACCAGGGGTACGTCTCGGGTTTGCACAAG
AAGGATGACACATTTCTATACGTATCGGAGGGGGCGGTGGGCTGGGGGCC
CCGCATGCGTCTCCTTTCCACGACGGAGTACACTCTTATCGTACTCAGAT
CACCCGAGGTAGGGTACGTCTCGGGTTTGCACAAGAAGGATGACACATTT
CTATACGTATCGGAGGGGGCGGTGGGCTGGGGGCCCCGCATGCGTCTCCT
TTCCACGACGGAGTACACTCTTATCGTACTCAGATCACCCGAGGTA
back to top