mRNA_M-pyrifera_M_contig97449.22446.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97449.22446.1
Unique NamemRNA_M-pyrifera_M_contig97449.22446.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: GATB1_MICPC (Glutamyl-tRNA(Gln) amidotransferase subunit B-1, chloroplastic/mitochondrial n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=GATB1_MICPC)

HSP 1 Score: 100 bits (250), Expect = 7.300e-21
Identity = 77/233 (33.05%), Postives = 120/233 (51.50%), Query Frame = 1
Query:    1 SISAAFDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNNQRRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELLAGDA--RAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693
            S +A   AV FE  R    + +GRG E+V ETR W+  ++R+  +R KE   DYR+ PEPDL  +  D A +  ++AE+P  PA  RAR A +  L    V  +    A +  F+A +AAG  AK+ A WLT +     +         + L  + LAE  +  + G +S +  + +  +LL G+     PRAI +E+GL +  +  +++  A+V+  L   PG    +R GK
Sbjct:  281 SFNAMSRAVDFEIERQTTLIRDGRGDEIVQETRTWDEGRQRTVSMRKKEGLADYRYFPEPDLPPLVFDNAYVDGVKAEMPELPAAIRARYAAL-GLPDDAVQVLVEDKALVEYFDATIAAGAPAKQAANWLTGDIMAYLKNAKDVTISTMPLRSKDLAEFCSMIENGEISGKIGKDILPDLLVGETGGAGPRAIVEERGLSQISDPAEIE--AIVDKVLEENPGQLEQYRGGK 510          
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: A0A1G0ZSU6_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Lentisphaerae bacterium RIFOXYC12_FULL_60_16 TaxID=1798582 RepID=A0A1G0ZSU6_9BACT)

HSP 1 Score: 94.4 bits (233), Expect = 1.140e-18
Identity = 86/233 (36.91%), Postives = 118/233 (50.64%), Query Frame = 1
Query:   16 FDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWL-TNNQRRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELL--AGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGKAAAL 705
            F A+  E +R    L EG GG +  ET  W+P+   ++ +R KE A DYR+ PEPDL  VRLDPAV+    A LP  P   R RL R + +       +T   A    FEA V     AK V+ W+ T   RRL    +      V ++ E L  L+   +   L+   A+ V  EL    GD   PR+I + +GL R  +   L+  +LV+  L  +  +AAD+RAGKAAAL
Sbjct:  221 FHALEHEIQRQVSVL-EG-GGRVYQETLRWDPDAGATHAMRSKEDAHDYRYFPEPDLPPVRLDPAVVDGWRASLPEAPRVRRERLVREYGIPDYDAGVLTADQAVADYFEAAVRHASNAKAVSNWIMTEMLRRLSERAMDI--RSVRISPESLGNLVQLTERRTLNSNTAKDVFAELFEQGGD---PRSIVERRGLARISDPAALE--SLVDRVLTEQARSAADYRAGKAAAL 444          
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: A0A075KFF7_9FIRM (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=5 Tax=Pelosinus TaxID=365348 RepID=A0A075KFF7_9FIRM)

HSP 1 Score: 93.6 bits (231), Expect = 2.150e-18
Identity = 72/208 (34.62%), Postives = 114/208 (54.81%), Query Frame = 1
Query:   73 GGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNN-QRRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693
            GG+++ ETR W+  +  +  +R KE A DYR+LPEPDL  + +DPA +  +   LP  P   + RL   + L       +T S +    F+  V A  +AK VA WL     + L  E +S    PV+   E+L ELLA  + G +S + A++V  E+ A   +AP  I +E+GL +  + +++   A+V+  +AA P + AD++AGK
Sbjct:  244 GGKVIQETRTWDENKGMTASMRSKEQAHDYRYLPEPDLVPIVVDPARVEEIRTNLPELPDARKQRLMDAYGLSEYDANVITASKSMADYFDQSVQANGDAKTVANWLMGEVSKHLNNEGISILECPVS--PEQLTELLALIEKGTISNKIAKAVFEEMWASR-KAPEVIVKEKGLVQISDTSEI--VAIVDGVIAANPQSVADFKAGK 446          
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: G9YH74_9FIRM (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Anaeroglobus geminatus F0357 TaxID=861450 RepID=G9YH74_9FIRM)

HSP 1 Score: 93.6 bits (231), Expect = 2.170e-18
Identity = 78/233 (33.48%), Postives = 122/233 (52.36%), Query Frame = 1
Query:    1 SISAAFDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNN-QRRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELL-AGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693
            S++     + +E  R  R L EG  G ++ ETRGW+  +  ++  R KE + DYR+ PEPDL  + L    +  +  ELP  P   R R      L     A +T        FEA+VAAG EAK  A W+  +  ++L  E L+A   PV  T E LAEL++    G +S + A+ V  E+  +G++ A  A+ ++QGL +  +  + +L+ +V   + A P + AD++AGK
Sbjct:  222 SLTGVQKGIEYEAVRQARVLEEG--GRIIQETRGWDENKGVTFSQRVKEESNDYRYFPEPDLIPLELSEQWIEEVRRELPEMPDARRKRFTEALGLPEYDAAILTLEKGTADYFEAVVAAGAEAKAAANWMLGDFAKKLNEEGLTARESPV--TPENLAELISLIDKGTISGKIAKQVLPEMWRSGESAA--AVVEKQGLVQISD--EGELSGIVRKIIDANPQSVADYKAGK 446          
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: A0A535UT92_9CHLR (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535UT92_9CHLR)

HSP 1 Score: 90.9 bits (224), Expect = 1.020e-17
Identity = 85/231 (36.80%), Postives = 114/231 (49.35%), Query Frame = 1
Query:   22 AVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNNQRRLRRELLSAGHEPV---ALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGKAAAL 705
            AV +E  R    L  G G  L  ETRGW   +  +   R KEHA DYR+ PEPDLA + L   ++  +   LP  P    ARL   H +       +T +      FE LVAAGV A+  A W  N        L +A H P+    L  + LA LL    AG +++  A+ +  EL  G    P AI +E+GL +  +A +L  AALV+AA+ A   A AD++ GK  AL
Sbjct:  128 AVEYEITRQITVL--GAGETLHQETRGWVEARAATVSQRSKEHAHDYRYFPEPDLAPMVLSVEMVEEVRHTLPELPEARAARLVAEHGIGADDAGVLTATREEADSFERLVAAGVPARLAANWQVNAVN----GLSNAHHVPLWESGLGIDGLAALLRLVDAGTVNQTTAKELLEELYLGGGD-PGAIVRERGLGQVSDAAEL--AALVDAAIEANAKAVADFQGGKEGAL 349          
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: A0A847YQ44_9FIRM (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Veillonellaceae bacterium TaxID=2049049 RepID=A0A847YQ44_9FIRM)

HSP 1 Score: 91.7 bits (226), Expect = 1.020e-17
Identity = 80/232 (34.48%), Postives = 118/232 (50.86%), Query Frame = 1
Query:    1 SISAAFDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNN-QRRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693
            S  A   A+ +E  R    L EG  G ++ ETR W+  +  +  +R KE A DYR+ PEPDL  + +DPA + A+   LP  P   +ARL     L       +T +      ++ALVAAG +AK  A WL     + L    L   + PV   +  LAE++A    G +S + A+SV   +      AP  I +EQGL +  +  + +L  +VEA +AA P + AD++AGK
Sbjct:  221 SFKAVQRALEYEVERQTEVLEEG--GRVIQETRTWDDARGVTLSMRNKEQAQDYRYFPEPDLVPIIVDPARVEAIRQSLPELPDARKARLMENQGLSAYDAEVITATRPMADYYDALVAAGADAKAAANWLMGEVSKHLNACALDIRNCPVPPAN--LAEMIALIDKGTISGKIAKSVFESMWNEGKPAP-VIIKEQGLVQMSD--EGELGGIVEAVIAANPQSVADFKAGK 445          
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: A0A535MMQ8_9CHLR (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535MMQ8_9CHLR)

HSP 1 Score: 90.9 bits (224), Expect = 2.250e-17
Identity = 85/231 (36.80%), Postives = 114/231 (49.35%), Query Frame = 1
Query:   22 AVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNNQRRLRRELLSAGHEPV---ALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGKAAAL 705
            AV +E  R    L  G G  L  ETRGW   +  +   R KEHA DYR+ PEPDLA + L   ++  +   LP  P    ARL   H +       +T +      FE LVAAGV A+  A W  N        L +A H P+    L  + LA LL    AG +++  A+ +  EL  G    P AI +E+GL +  +A +L  AALV+AA+ A   A AD++ GK  AL
Sbjct:  308 AVEYEITRQITVL--GAGETLHQETRGWVEARAATVSQRSKEHAHDYRYFPEPDLAPMVLSVEMVEEVRHTLPELPEARAARLVAEHGIGADDAGVLTATREEADSFERLVAAGVPARLAANWQVNAVN----GLSNAHHVPLWESGLGIDGLAALLRLVDAGTVNQTTAKELLEELYLGGGD-PGAIVRERGLGQVSDAAEL--AALVDAAIEANAKAVADFQGGKEGAL 529          
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: UPI001B8ABCA6 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB n=1 Tax=Chloracidobacterium validum TaxID=2821543 RepID=UPI001B8ABCA6)

HSP 1 Score: 90.5 bits (223), Expect = 2.730e-17
Identity = 80/225 (35.56%), Postives = 111/225 (49.33%), Query Frame = 1
Query:   22 AVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNNQ-RRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693
            A+ +E  R  R L EG  G +V ETR WN  + R+Y +R KE A DYR+ PEPDL  + +    +AAL A+ P  P   R R A  + L     + MT +      FEA V A   A+    W+ N    R+  E LS    PV  T   LAEL+A    G LS + A+ V   +LA   +  +AI QE G  +  +   ++  A+    +A  P   A++RAGK
Sbjct:  246 AIDYEIARQVRVLEEG--GRIVQETRLWNEREGRTYTMRSKEEAHDYRYFPEPDLPPLVITAETIAALRAKTPELPEPRRRRFAESYGLSLEDSSLMTTTREIADFFEACVEASGNARAAFNWIANELLARVPAEKLSLSTSPV--TPAALAELIALIADGTLSNKLAKDVFERMLA-TGKPAKAIVQELGGGQVSDVGQIE--AIAHEVIAGNPKQTAEYRAGK 463          
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: E2ZC48_9FIRM (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Megasphaera micronuciformis F0359 TaxID=706434 RepID=E2ZC48_9FIRM)

HSP 1 Score: 89.7 bits (221), Expect = 4.820e-17
Identity = 72/232 (31.03%), Postives = 123/232 (53.02%), Query Frame = 1
Query:    1 SISAAFDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNNQ-RRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693
            S++     + +E  R  + L EG  G++V ETRGW+  +  ++  R KE + DYR+ PEPDL  + +    +  +  ELP  P   +AR     +L       +T   A    FEA+VAAG +AK  + W+  +  +++  E +SA   P++    +LAELL   + G +S + A+ V  E+     ++ +AI +EQG+ +  +  +L+   +V+  +AA P +  D+RAGK
Sbjct:  222 SLTGVQKGIEYEAVRQAQILEEG--GKIVQETRGWDENKGVTFSQRVKEESNDYRYFPEPDLIPLEISEDWIEEVRKELPEMPDARQARFIEKLELPEYDAGLLTLEKATADYFEAVVAAGADAKTASNWILGDMAKKMNEEGVSAKDLPIS--PRQLAELLELIKKGTISGKIAKKVLPEMWTSH-KSAKAIVEEQGMVQISDTGELE--GIVQKIIAANPQSVEDYRAGK 446          
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: A0A1V5Z254_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5Z254_9BACT)

HSP 1 Score: 89.0 bits (219), Expect = 8.840e-17
Identity = 78/232 (33.62%), Postives = 118/232 (50.86%), Query Frame = 1
Query:    1 SISAAFDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWL-TNNQRRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693
            S S    A+ +E  R    L  G  G++V ETRGW+ ++  +   R KE A +YR+ PEPD+  + +D A +  +  ELP  P   + R    + L       +T S A    +EA+V+AG + K+ A WL    Q  L    L     PV+     LAELLA  + G ++ + A+ V  E+    A AP+ I +E+GL +  ++  L+    + A + A PG AAD+RAGK
Sbjct:  218 SFSGTQKAIEYEVERQIEVLNSG--GKVVQETRGWDADKGITVSQRLKESAHEYRYFPEPDIPPIVVDEAWIEQIRKELPEFPIARKERFQSQYGLSLYDAQVLTFSRAMADFYEAIVSAGADPKKAANWLMVELQALLSDTKLDISASPVSPAS--LAELLALIETGIINGKIAKEVLVEMFKSGA-APKKIVEEKGLGQISDSKALE--ETIRAIIEANPGQAADYRAGK 442          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
GATB1_MICPC7.300e-2133.05Glutamyl-tRNA(Gln) amidotransferase subunit B-1, c... [more]
A0A1G0ZSU6_9BACT1.140e-1836.91Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A075KFF7_9FIRM2.150e-1834.62Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
G9YH74_9FIRM2.170e-1833.48Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A535UT92_9CHLR1.020e-1736.80Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
A0A847YQ44_9FIRM1.020e-1734.48Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A535MMQ8_9CHLR2.250e-1736.80Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
UPI001B8ABCA62.730e-1735.56Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
E2ZC48_9FIRM4.820e-1731.03Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A1V5Z254_9BACT8.840e-1733.62Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97449contigM-pyrifera_M_contig97449:1..705 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score107.1
Seed ortholog evalue1.2e-20
Seed eggNOG ortholog38833.XP_003055655.1
Preferred nameGATB
KEGG rclassRC00010
KEGG koko:K02434
KEGG ReactionR03905,R04212
KEGG Pathwayko00970,ko01100,map00970,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564
EggNOG free text desc.Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln)
EggNOG OGs34HEG@3041,37HZP@33090,COG0064@1,KOG2438@2759
EC6.3.5.6,6.3.5.7
COG Functional cat.J
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029
Exons1
Model size705
Cds size705
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816891.3385925-CDS-M-pyrifera_M_contig97449:0..7051622816891.3385925-CDS-M-pyrifera_M_contig97449:0..705Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97449 1..705 +
1692278239.4920444-CDS-M-pyrifera_M_contig97449:0..7051692278239.4920444-CDS-M-pyrifera_M_contig97449:0..705Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97449 1..705 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97449.22446.1prot_M-pyrifera_M_contig97449.22446.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97449 1..705 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97449.22446.1

>prot_M-pyrifera_M_contig97449.22446.1 ID=prot_M-pyrifera_M_contig97449.22446.1|Name=mRNA_M-pyrifera_M_contig97449.22446.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=235bp
SISAAFDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEH
ATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSH
VAAMTRSPARLARFEALVAAGVEAKRVAKWLTNNQRRLRRELLSAGHEPV
ALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWR
AEEATDLDLAALVEAALAAEPGAAADWRAGKAAAL
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mRNA from alignment at M-pyrifera_M_contig97449:1..705+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97449.22446.1 ID=mRNA_M-pyrifera_M_contig97449.22446.1|Name=mRNA_M-pyrifera_M_contig97449.22446.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=705bp|location=Sequence derived from alignment at M-pyrifera_M_contig97449:1..705+ (Macrocystis pyrifera P11B4 male)
TCGATCTCCGCGGCGTTCGACGCGGTGCGCTTCGAGACGCGGCGCCTGAA GCGCGCGCTCGCCGAGGGCCGCGGCGGCGAGCTCGTCGCCGAGACCCGCG GCTGGAACCCCGAGCAGCGCCGCTCGTACCCGCTGCGCCCCAAGGAGCAC GCGACCGACTACCGCTGGCTGCCCGAGCCGGACCTCGCCGAAGTGCGCCT CGACCCCGCCGTGCTCGCGGCGCTCGAGGCCGAACTACCTCCGCGGCCCG CCGAACACCGCGCGCGCCTCGCCCGGATCCACGACCTGCGCCCGAGCCAC GTGGCGGCGATGACGCGCTCGCCGGCGCGGCTGGCACGCTTCGAGGCGCT CGTGGCGGCCGGCGTCGAGGCCAAGCGCGTCGCCAAGTGGCTGACCAACA ACCAGCGCCGCCTGCGCCGCGAGCTCCTGTCCGCCGGCCACGAACCGGTC GCCCTGACCGACGAGCGCCTCGCCGAGCTGCTGGCCGCCTGGCAAGCCGG CCGCCTCTCCCGCGAAGGCGCGGAGTCGGTCGCCCGCGAGCTGCTCGCCG GCGACGCCCGCGCCCCGCGAGCGATCGCCCAGGAGCAGGGCCTCTGGCGC GCCGAGGAAGCCACCGACCTCGACCTCGCCGCCCTGGTCGAAGCCGCCCT CGCCGCCGAGCCCGGGGCCGCCGCCGACTGGCGCGCGGGCAAGGCCGCCG CGCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97449:1..705+

>mRNA_M-pyrifera_M_contig97449.22446.1 ID=mRNA_M-pyrifera_M_contig97449.22446.1|Name=mRNA_M-pyrifera_M_contig97449.22446.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1410bp|location=Sequence derived from alignment at M-pyrifera_M_contig97449:1..705+ (Macrocystis pyrifera P11B4 male)
TCGATCTCCGCGGCGTTCGACGCGGTGCGCTTCGAGACGCGGCGCCTGAA
GCGCGCGCTCGCCGAGGGCCGCGGCGGCGAGCTCGTCGCCGAGACCCGCG
GCTGGAACCCCGAGCAGCGCCGCTCGTACCCGCTGCGCCCCAAGGAGCAC
GCGACCGACTACCGCTGGCTGCCCGAGCCGGACCTCGCCGAAGTGCGCCT
CGACCCCGCCGTGCTCGCGGCGCTCGAGGCCGAACTACCTCCGCGGCCCG
CCGAACACCGCGCGCGCCTCGCCCGGATCCACGACCTGCGCCCGAGCCAC
GTGGCGGCGATGACGCGCTCGCCGGCGCGGCTGGCACGCTTCGAGGCGCT
CGTGGCGGCCGGCGTCGAGGCCAAGCGCGTCGCCAAGTGGCTGACCAACA
ACCAGCGCCGCCTGCGCCGCGAGCTCCTGTCCGCCGGCCACGAACCGGTC
GCCCTGACCGACGAGCGCCTCGCCGAGCTGCTGGCCGCCTGGCAAGCCGG
CCGCCTCTCCCGCGAAGGCGCGGAGTCGGTCGCCCGCGAGCTGCTCGCCG
GCGACGCCCGCGCCCCGCGAGCGATCGCCCAGGAGCAGGGCCTCTGGCGC
GCCGAGGAAGCCACCGACCTCGACCTCGCCGCCCTGGTCGAAGCCGCCCT
CGCCGCCGAGCCCGGGGCCGCCGCCGACTGGCGCGCGGGCAAGGCCGCCG
CGCTGTCGATCTCCGCGGCGTTCGACGCGGTGCGCTTCGAGACGCGGCGC
CTGAAGCGCGCGCTCGCCGAGGGCCGCGGCGGCGAGCTCGTCGCCGAGAC
CCGCGGCTGGAACCCCGAGCAGCGCCGCTCGTACCCGCTGCGCCCCAAGG
AGCACGCGACCGACTACCGCTGGCTGCCCGAGCCGGACCTCGCCGAAGTG
CGCCTCGACCCCGCCGTGCTCGCGGCGCTCGAGGCCGAACTACCTCCGCG
GCCCGCCGAACACCGCGCGCGCCTCGCCCGGATCCACGACCTGCGCCCGA
GCCACGTGGCGGCGATGACGCGCTCGCCGGCGCGGCTGGCACGCTTCGAG
GCGCTCGTGGCGGCCGGCGTCGAGGCCAAGCGCGTCGCCAAGTGGCTGAC
CAACAACCAGCGCCGCCTGCGCCGCGAGCTCCTGTCCGCCGGCCACGAAC
CGGTCGCCCTGACCGACGAGCGCCTCGCCGAGCTGCTGGCCGCCTGGCAA
GCCGGCCGCCTCTCCCGCGAAGGCGCGGAGTCGGTCGCCCGCGAGCTGCT
CGCCGGCGACGCCCGCGCCCCGCGAGCGATCGCCCAGGAGCAGGGCCTCT
GGCGCGCCGAGGAAGCCACCGACCTCGACCTCGCCGCCCTGGTCGAAGCC
GCCCTCGCCGCCGAGCCCGGGGCCGCCGCCGACTGGCGCGCGGGCAAGGC
CGCCGCGCTG
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