mRNA_M-pyrifera_M_contig97449.22446.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: GATB1_MICPC (Glutamyl-tRNA(Gln) amidotransferase subunit B-1, chloroplastic/mitochondrial n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=GATB1_MICPC) HSP 1 Score: 100 bits (250), Expect = 7.300e-21 Identity = 77/233 (33.05%), Postives = 120/233 (51.50%), Query Frame = 1 Query: 1 SISAAFDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNNQRRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELLAGDA--RAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693 S +A AV FE R + +GRG E+V ETR W+ ++R+ +R KE DYR+ PEPDL + D A + ++AE+P PA RAR A + L V + A + F+A +AAG AK+ A WLT + + + L + LAE + + G +S + + + +LL G+ PRAI +E+GL + + +++ A+V+ L PG +R GK Sbjct: 281 SFNAMSRAVDFEIERQTTLIRDGRGDEIVQETRTWDEGRQRTVSMRKKEGLADYRYFPEPDLPPLVFDNAYVDGVKAEMPELPAAIRARYAAL-GLPDDAVQVLVEDKALVEYFDATIAAGAPAKQAANWLTGDIMAYLKNAKDVTISTMPLRSKDLAEFCSMIENGEISGKIGKDILPDLLVGETGGAGPRAIVEERGLSQISDPAEIE--AIVDKVLEENPGQLEQYRGGK 510
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: A0A1G0ZSU6_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Lentisphaerae bacterium RIFOXYC12_FULL_60_16 TaxID=1798582 RepID=A0A1G0ZSU6_9BACT) HSP 1 Score: 94.4 bits (233), Expect = 1.140e-18 Identity = 86/233 (36.91%), Postives = 118/233 (50.64%), Query Frame = 1 Query: 16 FDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWL-TNNQRRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELL--AGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGKAAAL 705 F A+ E +R L EG GG + ET W+P+ ++ +R KE A DYR+ PEPDL VRLDPAV+ A LP P R RL R + + +T A FEA V AK V+ W+ T RRL + V ++ E L L+ + L+ A+ V EL GD PR+I + +GL R + L+ +LV+ L + +AAD+RAGKAAAL Sbjct: 221 FHALEHEIQRQVSVL-EG-GGRVYQETLRWDPDAGATHAMRSKEDAHDYRYFPEPDLPPVRLDPAVVDGWRASLPEAPRVRRERLVREYGIPDYDAGVLTADQAVADYFEAAVRHASNAKAVSNWIMTEMLRRLSERAMDI--RSVRISPESLGNLVQLTERRTLNSNTAKDVFAELFEQGGD---PRSIVERRGLARISDPAALE--SLVDRVLTEQARSAADYRAGKAAAL 444
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: A0A075KFF7_9FIRM (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=5 Tax=Pelosinus TaxID=365348 RepID=A0A075KFF7_9FIRM) HSP 1 Score: 93.6 bits (231), Expect = 2.150e-18 Identity = 72/208 (34.62%), Postives = 114/208 (54.81%), Query Frame = 1 Query: 73 GGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNN-QRRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693 GG+++ ETR W+ + + +R KE A DYR+LPEPDL + +DPA + + LP P + RL + L +T S + F+ V A +AK VA WL + L E +S PV+ E+L ELLA + G +S + A++V E+ A +AP I +E+GL + + +++ A+V+ +AA P + AD++AGK Sbjct: 244 GGKVIQETRTWDENKGMTASMRSKEQAHDYRYLPEPDLVPIVVDPARVEEIRTNLPELPDARKQRLMDAYGLSEYDANVITASKSMADYFDQSVQANGDAKTVANWLMGEVSKHLNNEGISILECPVS--PEQLTELLALIEKGTISNKIAKAVFEEMWASR-KAPEVIVKEKGLVQISDTSEI--VAIVDGVIAANPQSVADFKAGK 446
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: G9YH74_9FIRM (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Anaeroglobus geminatus F0357 TaxID=861450 RepID=G9YH74_9FIRM) HSP 1 Score: 93.6 bits (231), Expect = 2.170e-18 Identity = 78/233 (33.48%), Postives = 122/233 (52.36%), Query Frame = 1 Query: 1 SISAAFDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNN-QRRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELL-AGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693 S++ + +E R R L EG G ++ ETRGW+ + ++ R KE + DYR+ PEPDL + L + + ELP P R R L A +T FEA+VAAG EAK A W+ + ++L E L+A PV T E LAEL++ G +S + A+ V E+ +G++ A A+ ++QGL + + + +L+ +V + A P + AD++AGK Sbjct: 222 SLTGVQKGIEYEAVRQARVLEEG--GRIIQETRGWDENKGVTFSQRVKEESNDYRYFPEPDLIPLELSEQWIEEVRRELPEMPDARRKRFTEALGLPEYDAAILTLEKGTADYFEAVVAAGAEAKAAANWMLGDFAKKLNEEGLTARESPV--TPENLAELISLIDKGTISGKIAKQVLPEMWRSGESAA--AVVEKQGLVQISD--EGELSGIVRKIIDANPQSVADYKAGK 446
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: A0A535UT92_9CHLR (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535UT92_9CHLR) HSP 1 Score: 90.9 bits (224), Expect = 1.020e-17 Identity = 85/231 (36.80%), Postives = 114/231 (49.35%), Query Frame = 1 Query: 22 AVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNNQRRLRRELLSAGHEPV---ALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGKAAAL 705 AV +E R L G G L ETRGW + + R KEHA DYR+ PEPDLA + L ++ + LP P ARL H + +T + FE LVAAGV A+ A W N L +A H P+ L + LA LL AG +++ A+ + EL G P AI +E+GL + +A +L AALV+AA+ A A AD++ GK AL Sbjct: 128 AVEYEITRQITVL--GAGETLHQETRGWVEARAATVSQRSKEHAHDYRYFPEPDLAPMVLSVEMVEEVRHTLPELPEARAARLVAEHGIGADDAGVLTATREEADSFERLVAAGVPARLAANWQVNAVN----GLSNAHHVPLWESGLGIDGLAALLRLVDAGTVNQTTAKELLEELYLGGGD-PGAIVRERGLGQVSDAAEL--AALVDAAIEANAKAVADFQGGKEGAL 349
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: A0A847YQ44_9FIRM (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Veillonellaceae bacterium TaxID=2049049 RepID=A0A847YQ44_9FIRM) HSP 1 Score: 91.7 bits (226), Expect = 1.020e-17 Identity = 80/232 (34.48%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 1 SISAAFDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNN-QRRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693 S A A+ +E R L EG G ++ ETR W+ + + +R KE A DYR+ PEPDL + +DPA + A+ LP P +ARL L +T + ++ALVAAG +AK A WL + L L + PV + LAE++A G +S + A+SV + AP I +EQGL + + + +L +VEA +AA P + AD++AGK Sbjct: 221 SFKAVQRALEYEVERQTEVLEEG--GRVIQETRTWDDARGVTLSMRNKEQAQDYRYFPEPDLVPIIVDPARVEAIRQSLPELPDARKARLMENQGLSAYDAEVITATRPMADYYDALVAAGADAKAAANWLMGEVSKHLNACALDIRNCPVPPAN--LAEMIALIDKGTISGKIAKSVFESMWNEGKPAP-VIIKEQGLVQMSD--EGELGGIVEAVIAANPQSVADFKAGK 445
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: A0A535MMQ8_9CHLR (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535MMQ8_9CHLR) HSP 1 Score: 90.9 bits (224), Expect = 2.250e-17 Identity = 85/231 (36.80%), Postives = 114/231 (49.35%), Query Frame = 1 Query: 22 AVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNNQRRLRRELLSAGHEPV---ALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGKAAAL 705 AV +E R L G G L ETRGW + + R KEHA DYR+ PEPDLA + L ++ + LP P ARL H + +T + FE LVAAGV A+ A W N L +A H P+ L + LA LL AG +++ A+ + EL G P AI +E+GL + +A +L AALV+AA+ A A AD++ GK AL Sbjct: 308 AVEYEITRQITVL--GAGETLHQETRGWVEARAATVSQRSKEHAHDYRYFPEPDLAPMVLSVEMVEEVRHTLPELPEARAARLVAEHGIGADDAGVLTATREEADSFERLVAAGVPARLAANWQVNAVN----GLSNAHHVPLWESGLGIDGLAALLRLVDAGTVNQTTAKELLEELYLGGGD-PGAIVRERGLGQVSDAAEL--AALVDAAIEANAKAVADFQGGKEGAL 529
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: UPI001B8ABCA6 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB n=1 Tax=Chloracidobacterium validum TaxID=2821543 RepID=UPI001B8ABCA6) HSP 1 Score: 90.5 bits (223), Expect = 2.730e-17 Identity = 80/225 (35.56%), Postives = 111/225 (49.33%), Query Frame = 1 Query: 22 AVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNNQ-RRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693 A+ +E R R L EG G +V ETR WN + R+Y +R KE A DYR+ PEPDL + + +AAL A+ P P R R A + L + MT + FEA V A A+ W+ N R+ E LS PV T LAEL+A G LS + A+ V +LA + +AI QE G + + ++ A+ +A P A++RAGK Sbjct: 246 AIDYEIARQVRVLEEG--GRIVQETRLWNEREGRTYTMRSKEEAHDYRYFPEPDLPPLVITAETIAALRAKTPELPEPRRRRFAESYGLSLEDSSLMTTTREIADFFEACVEASGNARAAFNWIANELLARVPAEKLSLSTSPV--TPAALAELIALIADGTLSNKLAKDVFERMLA-TGKPAKAIVQELGGGQVSDVGQIE--AIAHEVIAGNPKQTAEYRAGK 463
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: E2ZC48_9FIRM (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Megasphaera micronuciformis F0359 TaxID=706434 RepID=E2ZC48_9FIRM) HSP 1 Score: 89.7 bits (221), Expect = 4.820e-17 Identity = 72/232 (31.03%), Postives = 123/232 (53.02%), Query Frame = 1 Query: 1 SISAAFDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWLTNNQ-RRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693 S++ + +E R + L EG G++V ETRGW+ + ++ R KE + DYR+ PEPDL + + + + ELP P +AR +L +T A FEA+VAAG +AK + W+ + +++ E +SA P++ +LAELL + G +S + A+ V E+ ++ +AI +EQG+ + + +L+ +V+ +AA P + D+RAGK Sbjct: 222 SLTGVQKGIEYEAVRQAQILEEG--GKIVQETRGWDENKGVTFSQRVKEESNDYRYFPEPDLIPLEISEDWIEEVRKELPEMPDARQARFIEKLELPEYDAGLLTLEKATADYFEAVVAAGADAKTASNWILGDMAKKMNEEGVSAKDLPIS--PRQLAELLELIKKGTISGKIAKKVLPEMWTSH-KSAKAIVEEQGMVQISDTGELE--GIVQKIIAANPQSVEDYRAGK 446
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Match: A0A1V5Z254_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5Z254_9BACT) HSP 1 Score: 89.0 bits (219), Expect = 8.840e-17 Identity = 78/232 (33.62%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 1 SISAAFDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHATDYRWLPEPDLAEVRLDPAVLAALEAELPPRPAEHRARLARIHDLRPSHVAAMTRSPARLARFEALVAAGVEAKRVAKWL-TNNQRRLRRELLSAGHEPVALTDERLAELLAAWQAGRLSREGAESVARELLAGDARAPRAIAQEQGLWRAEEATDLDLAALVEAALAAEPGAAADWRAGK 693 S S A+ +E R L G G++V ETRGW+ ++ + R KE A +YR+ PEPD+ + +D A + + ELP P + R + L +T S A +EA+V+AG + K+ A WL Q L L PV+ LAELLA + G ++ + A+ V E+ A AP+ I +E+GL + ++ L+ + A + A PG AAD+RAGK Sbjct: 218 SFSGTQKAIEYEVERQIEVLNSG--GKVVQETRGWDADKGITVSQRLKESAHEYRYFPEPDIPPIVVDEAWIEQIRKELPEFPIARKERFQSQYGLSLYDAQVLTFSRAMADFYEAIVSAGADPKKAANWLMVELQALLSDTKLDISASPVSPAS--LAELLALIETGIINGKIAKEVLVEMFKSGA-APKKIVEEKGLGQISDSKALE--ETIRAIIEANPGQAADYRAGK 442 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97449.22446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97449.22446.1 >prot_M-pyrifera_M_contig97449.22446.1 ID=prot_M-pyrifera_M_contig97449.22446.1|Name=mRNA_M-pyrifera_M_contig97449.22446.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=235bp SISAAFDAVRFETRRLKRALAEGRGGELVAETRGWNPEQRRSYPLRPKEHback to top mRNA from alignment at M-pyrifera_M_contig97449:1..705+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97449.22446.1 ID=mRNA_M-pyrifera_M_contig97449.22446.1|Name=mRNA_M-pyrifera_M_contig97449.22446.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=705bp|location=Sequence derived from alignment at M-pyrifera_M_contig97449:1..705+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97449:1..705+ >mRNA_M-pyrifera_M_contig97449.22446.1 ID=mRNA_M-pyrifera_M_contig97449.22446.1|Name=mRNA_M-pyrifera_M_contig97449.22446.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1410bp|location=Sequence derived from alignment at M-pyrifera_M_contig97449:1..705+ (Macrocystis pyrifera P11B4 male)back to top |