mRNA_M-pyrifera_M_contig97442.22445.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97442.22445.1
Unique NamemRNA_M-pyrifera_M_contig97442.22445.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig97442.22445.1 vs. uniprot
Match: UPI000C75A87C (solute carrier family 2, facilitated glucose transporter member 1-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75A87C)

HSP 1 Score: 87.8 bits (216), Expect = 3.240e-18
Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = 1 
Query:    1 AIVFLLLYVIGFEAGLGGIPWMIGGELIPESHRGIAMSYAAALNWLANFAVGLFFEPLQVALTPQLSFVPFIVILALITAFVFFVVPETKNRPI 282
            AIV ++L+V+GF  G G IPW    EL  +S R IA S A A+NW ANF VGL F P+Q+A+ P + F+ F+V   +  A+V+FVVPETKNR I
Sbjct:  379 AIVAVILFVVGFATGPGSIPWFFVTELFSQSGRPIASSIAVAVNWSANFLVGLGFSPIQLAVGPYV-FIIFMVTQLIFIAYVWFVVPETKNRTI 471
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BLAST of mRNA_M-pyrifera_M_contig97442.22445.1 vs. uniprot
Match: A0A553PPB8_TIGCA (MFS domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PPB8_TIGCA)

HSP 1 Score: 86.7 bits (213), Expect = 8.630e-18
Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 1 
Query:    1 AIVFLLLYVIGFEAGLGGIPWMIGGELIPESHRGIAMSYAAALNWLANFAVGLFFEPLQVALTPQLSFVPFIVILALITAFVFFVVPETKNRPISDI 291
            +IV ++ +V+GF  G G IPW    EL  +S R IA S A A+NW ANF VGL F PLQ+A+ P + F+ FI+I     A+V+F VPETKNR I +I
Sbjct:  388 SIVMVIGFVVGFATGPGSIPWFFVTELFNQSGRPIATSIAVAVNWSANFLVGLGFAPLQLAIGPYV-FIIFIIIQFFFIAYVWFKVPETKNRTIEEI 483
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BLAST of mRNA_M-pyrifera_M_contig97442.22445.1 vs. uniprot
Match: J9JZS7_ACYPI (MFS domain-containing protein n=12 Tax=Aphididae TaxID=27482 RepID=J9JZS7_ACYPI)

HSP 1 Score: 86.3 bits (212), Expect = 1.290e-17
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 1 
Query:    1 AIVFLLLYVIGFEAGLGGIPWMIGGELIPESHRGIAMSYAAALNWLANFAVGLFFEPLQVALTPQLSFVPFIVILALITAFVFFVVPETKNRPISDIL 294
            A+V +L +V+ F  G G IPWMI  EL  +  R  AMS A  +NW+ANFAVG+ F+PL+ AL    +F+PF V+LA+   F +  VPETKN+   +IL
Sbjct:  406 AVVSILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLINWVANFAVGIGFQPLKTALD-NYTFLPFSVLLAIFWIFTYKKVPETKNKTFEEIL 502
[Close]
BLAST of mRNA_M-pyrifera_M_contig97442.22445.1 vs. uniprot
Match: UPI0007639E4E (uncharacterized protein LOC107174201 n=1 Tax=Diuraphis noxia TaxID=143948 RepID=UPI0007639E4E)

HSP 1 Score: 86.3 bits (212), Expect = 1.290e-17
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 1 
Query:    1 AIVFLLLYVIGFEAGLGGIPWMIGGELIPESHRGIAMSYAAALNWLANFAVGLFFEPLQVALTPQLSFVPFIVILALITAFVFFVVPETKNRPISDIL 294
            A+V +L +V+ F  G G IPWMI  EL  +  R  AMS A  +NW+ANFAVG+ F+PL+ AL    +F+PF V+LA+   F +  VPETKN+   +IL
Sbjct:  432 AVVSILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLINWVANFAVGIGFQPLKTALD-NYTFLPFSVLLAIFWIFTYKKVPETKNKTFEEIL 528
[Close]
BLAST of mRNA_M-pyrifera_M_contig97442.22445.1 vs. uniprot
Match: A0A6G0TWU4_APHGL (MFS domain-containing protein n=30 Tax=Aphididae TaxID=27482 RepID=A0A6G0TWU4_APHGL)

HSP 1 Score: 86.3 bits (212), Expect = 1.300e-17
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 1 
Query:    1 AIVFLLLYVIGFEAGLGGIPWMIGGELIPESHRGIAMSYAAALNWLANFAVGLFFEPLQVALTPQLSFVPFIVILALITAFVFFVVPETKNRPISDIL 294
            A+V +L +V+ F  G G IPWMI  EL  +  R  AMS A  +NW+ANFAVG+ F+PL+ AL    +F+PF V+LA+   F +  VPETKN+   +IL
Sbjct:  492 AVVSILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLINWVANFAVGIGFQPLKTALD-NYTFLPFSVLLAIFWIFTYKKVPETKNKTFEEIL 588
[Close]
BLAST of mRNA_M-pyrifera_M_contig97442.22445.1 vs. uniprot
Match: A0A8B8FLQ5_9HEMI (glucose transporter type 1 n=3 Tax=Aphididae TaxID=27482 RepID=A0A8B8FLQ5_9HEMI)

HSP 1 Score: 86.3 bits (212), Expect = 1.310e-17
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 1 
Query:    1 AIVFLLLYVIGFEAGLGGIPWMIGGELIPESHRGIAMSYAAALNWLANFAVGLFFEPLQVALTPQLSFVPFIVILALITAFVFFVVPETKNRPISDIL 294
            A+V +L +V+ F  G G IPWMI  EL  +  R  AMS A  +NW+ANFAVG+ F+PL+ AL    +F+PF V+LA+   F +  VPETKN+   +IL
Sbjct:  491 AVVSILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLINWVANFAVGIGFQPLKTALD-NYTFLPFSVLLAIFWIFTYKKVPETKNKTFEEIL 587
[Close]
BLAST of mRNA_M-pyrifera_M_contig97442.22445.1 vs. uniprot
Match: A0A6A4IU29_APOLU (MFS domain-containing protein (Fragment) n=1 Tax=Apolygus lucorum TaxID=248454 RepID=A0A6A4IU29_APOLU)

HSP 1 Score: 82.4 bits (202), Expect = 1.530e-17
Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 1 
Query:   16 LLYVIGFEAGLGGIPWMIGGELIPESHRGIAMSYAAALNWLANFAVGLFFEPLQVALTPQLSFVPFIVILALITAFVFFVVPETKNRPISDIL 294
            LL+V+ F  G G IPW+I  EL  +  R  AMS A  +NWLANF VG+ F+P+Q  L    +F+PF  +LA+   F +  VPETKN+   +IL
Sbjct:   21 LLFVVFFALGPGSIPWLITAELFSQGPRPTAMSIAVLINWLANFIVGIGFQPMQTCLE-NYTFLPFAALLAIFWIFTYKKVPETKNKTFEEIL 112
[Close]
BLAST of mRNA_M-pyrifera_M_contig97442.22445.1 vs. uniprot
Match: A0A5E4NCC7_9HEMI (MFS domain-containing protein n=6 Tax=Aphididae TaxID=27482 RepID=A0A5E4NCC7_9HEMI)

HSP 1 Score: 85.9 bits (211), Expect = 1.800e-17
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 1 
Query:    1 AIVFLLLYVIGFEAGLGGIPWMIGGELIPESHRGIAMSYAAALNWLANFAVGLFFEPLQVALTPQLSFVPFIVILALITAFVFFVVPETKNRPISDIL 294
            A+V +L +V+ F  G G IPWMI  EL  +  R  AMS A  +NW+ANFAVG+ F+PL+ AL    +F+PF V+LA+   F +  VPETKN+   +IL
Sbjct:  604 AVVSILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLINWVANFAVGIGFQPLKTALD-NYTFLPFSVLLAVFWIFTYKKVPETKNKTFEEIL 700
[Close]
BLAST of mRNA_M-pyrifera_M_contig97442.22445.1 vs. uniprot
Match: A0A0A9WW69_LYGHE (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WW69_LYGHE)

HSP 1 Score: 82.4 bits (202), Expect = 5.200e-17
Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 1 
Query:   16 LLYVIGFEAGLGGIPWMIGGELIPESHRGIAMSYAAALNWLANFAVGLFFEPLQVALTPQLSFVPFIVILALITAFVFFVVPETKNRPISDIL 294
            LL+V+ F  G G IPW+I  EL  +  R  AMS A  +NWLANF VG+ F+P+Q  L    +F+PF  +LA+   F +  VPETKN+   +IL
Sbjct:  129 LLFVVFFALGPGSIPWLITAELFSQGPRPTAMSIAVLINWLANFIVGIGFQPMQACLE-NYTFLPFAALLAIFWIFTYKKVPETKNKTFEEIL 220
[Close]
BLAST of mRNA_M-pyrifera_M_contig97442.22445.1 vs. uniprot
Match: A0A1I8A9I8_9BILA (MFS domain-containing protein n=2 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8A9I8_9BILA)

HSP 1 Score: 83.2 bits (204), Expect = 1.520e-16
Identity = 49/97 (50.52%), Postives = 58/97 (59.79%), Query Frame = 1 
Query:    1 AIVFLLLYVIGFEAGLGGIPWMIGGELIPESHRGIAMSYAAALNWLANFAVGLFFEPLQVALTPQLSFVPFIVILALITAFVFFVVPETKNRPISDI 291
            AI+F+LL+VI F  G G IPW    E+   S RG A S A  +NW ANFAVGLFF PL   L  Q SF+ F+  LA+   F    VPETK + I DI
Sbjct:  425 AIIFVLLFVISFATGPGSIPWFFVSEIFASSARGNANSIAVLVNWAANFAVGLFFLPLN-NLLHQYSFLVFVGFLAIFIVFTSKWVPETKGKTIEDI 520
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97442.22445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C75A87C3.240e-1852.13solute carrier family 2, facilitated glucose trans... [more]
A0A553PPB8_TIGCA8.630e-1850.52MFS domain-containing protein n=1 Tax=Tigriopus ca... [more]
J9JZS7_ACYPI1.290e-1747.96MFS domain-containing protein n=12 Tax=Aphididae T... [more]
UPI0007639E4E1.290e-1747.96uncharacterized protein LOC107174201 n=1 Tax=Diura... [more]
A0A6G0TWU4_APHGL1.300e-1747.96MFS domain-containing protein n=30 Tax=Aphididae T... [more]
A0A8B8FLQ5_9HEMI1.310e-1747.96glucose transporter type 1 n=3 Tax=Aphididae TaxID... [more]
A0A6A4IU29_APOLU1.530e-1746.24MFS domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A5E4NCC7_9HEMI1.800e-1747.96MFS domain-containing protein n=6 Tax=Aphididae Ta... [more]
A0A0A9WW69_LYGHE5.200e-1746.24Solute carrier family 2, facilitated glucose trans... [more]
A0A1I8A9I8_9BILA1.520e-1650.52MFS domain-containing protein n=2 Tax=Steinernema ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97442contigM-pyrifera_M_contig97442:68..361 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score86.7
Seed ortholog evalue6.8e-15
Seed eggNOG ortholog7029.ACYPI005975-PA
Preferred nameGlut1
KEGG koko:K07299
KEGG TC2.A.1.1.28
KEGG Pathwayko04066,ko04911,ko04919,ko04920,ko04922,ko04931,ko04976,ko05166,ko05200,ko05211,ko05230,map04066,map04911,map04919,map04920,map04922,map04931,map04976,map05166,map05200,map05211,map05230
Hectar predicted targeting categorysignal peptide
GOsGO:0002791,GO:0002793,GO:0007275,GO:0007591,GO:0007593,GO:0008150,GO:0010646,GO:0010647,GO:0010817,GO:0021700,GO:0022404,GO:0023051,GO:0023056,GO:0032501,GO:0032502,GO:0032879,GO:0033500,GO:0042303,GO:0042335,GO:0042592,GO:0042593,GO:0043473,GO:0046883,GO:0046887,GO:0048066,GO:0048067,GO:0048085,GO:0048518,GO:0048522,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0065007,GO:0065008,GO:0090087,GO:0090276,GO:0090277,GO:1903530,GO:1903532
EggNOG free text desc.Sugar (and other) transporter
EggNOG OGs38DNJ@33154,3BAAV@33208,3CS42@33213,3E7V1@33342,3SGAS@50557,41TI1@6656,COG0477@1,KOG0569@2759
COG Functional cat.P
Best tax levelParaneoptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons1
Model size294
Cds size294
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816891.3066466-CDS-M-pyrifera_M_contig97442:67..3611622816891.3066466-CDS-M-pyrifera_M_contig97442:67..361Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97442 68..361 +
1692278239.4770055-CDS-M-pyrifera_M_contig97442:67..3611692278239.4770055-CDS-M-pyrifera_M_contig97442:67..361Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97442 68..361 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97442.22445.1prot_M-pyrifera_M_contig97442.22445.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97442 68..361 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97442.22445.1

>prot_M-pyrifera_M_contig97442.22445.1 ID=prot_M-pyrifera_M_contig97442.22445.1|Name=mRNA_M-pyrifera_M_contig97442.22445.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp
AIVFLLLYVIGFEAGLGGIPWMIGGELIPESHRGIAMSYAAALNWLANFA
VGLFFEPLQVALTPQLSFVPFIVILALITAFVFFVVPETKNRPISDIL
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mRNA from alignment at M-pyrifera_M_contig97442:68..361+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97442.22445.1 ID=mRNA_M-pyrifera_M_contig97442.22445.1|Name=mRNA_M-pyrifera_M_contig97442.22445.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig97442:68..361+ (Macrocystis pyrifera P11B4 male)
GCCATCGTGTTCCTCCTCCTCTACGTCATCGGCTTTGAAGCTGGGCTTGG
AGGCATCCCCTGGATGATCGGAGGCGAACTCATTCCAGAATCCCATCGAG
GCATCGCCATGTCTTATGCTGCTGCCCTCAATTGGTTAGCAAACTTTGCA
GTCGGTCTCTTCTTCGAACCCTTGCAAGTCGCCCTCACCCCGCAGCTCTC
CTTCGTCCCCTTCATCGTCATCCTAGCCCTCATCACCGCCTTCGTCTTCT
TCGTAGTGCCAGAAACCAAAAACAGACCCATCTCAGACATCCTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97442:68..361+

>mRNA_M-pyrifera_M_contig97442.22445.1 ID=mRNA_M-pyrifera_M_contig97442.22445.1|Name=mRNA_M-pyrifera_M_contig97442.22445.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig97442:68..361+ (Macrocystis pyrifera P11B4 male)
GCCATCGTGTTCCTCCTCCTCTACGTCATCGGCTTTGAAGCTGGGCTTGG
AGGCATCCCCTGGATGATCGGAGGCGAACTCATTCCAGAATCCCATCGAG
GCATCGCCATGTCTTATGCTGCTGCCCTCAATTGGTTAGCAAACTTTGCA
GTCGGTCTCTTCTTCGAACCCTTGCAAGTCGCCCTCACCCCGCAGCTCTC
CTTCGTCCCCTTCATCGTCATCCTAGCCCTCATCACCGCCTTCGTCTTCT
TCGTAGTGCCAGAAACCAAAAACAGACCCATCTCAGACATCCTAGCCATC
GTGTTCCTCCTCCTCTACGTCATCGGCTTTGAAGCTGGGCTTGGAGGCAT
CCCCTGGATGATCGGAGGCGAACTCATTCCAGAATCCCATCGAGGCATCG
CCATGTCTTATGCTGCTGCCCTCAATTGGTTAGCAAACTTTGCAGTCGGT
CTCTTCTTCGAACCCTTGCAAGTCGCCCTCACCCCGCAGCTCTCCTTCGT
CCCCTTCATCGTCATCCTAGCCCTCATCACCGCCTTCGTCTTCTTCGTAG
TGCCAGAAACCAAAAACAGACCCATCTCAGACATCCTA
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