mRNA_M-pyrifera_M_contig97410.22436.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97410.22436.1
Unique NamemRNA_M-pyrifera_M_contig97410.22436.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97410.22436.1 vs. uniprot
Match: A0A3D5DB07_9GAMM (Cytochrome C oxidase Cbb3 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DB07_9GAMM)

HSP 1 Score: 380 bits (976), Expect = 1.350e-126
Identity = 172/236 (72.88%), Postives = 205/236 (86.86%), Query Frame = 1
Query:    1 TGCAHWKFDTADAVRGAIVITELDDGRFVLLAGDRKAWFYAVDANSGELVWKDKVDDHDWALVTGSPKIYNDRVYVGVASFEELAGGSVTYECCTFRGSVLAYDIASGKRVWKSSTVLEPLVATKKTTTGVQLWGPSGVAVWSQPTIDPQAGVLYVTTGDSYSAPASKTSDSIIAMDLETGEIKWYVQTFPDDAFTAACTAPNADPVAQEGCGPDVDFGSSAILRTLPDGRRVLLA 708
            TGCAHWKF+T  AVRGAI+IT+ +DGRFVL AGDR+A FYA+DAN+GE++WKDK DDH WAL+T SP +Y   VYVG++SFEELAGGS  YECCTFRG+V+AY  A+GKR+WKSST++EPL  T++   G QLWGPSG AVWSQPTIDP+AGVLYVTTGDSYSAPA+ TSDS++AMDL+TG+IKW+VQT+  DAFT AC  P+ADP  +EGCGPDVD+GSSAILRTLPDGRR+LLA
Sbjct:  199 TGCAHWKFETGGAVRGAILITQFEDGRFVLFAGDREAMFYAIDANTGEMLWKDKADDHKWALITASPALYGGIVYVGLSSFEELAGGSDVYECCTFRGNVVAYVAATGKRLWKSSTIVEPLEKTRQLANGTQLWGPSGAAVWSQPTIDPKAGVLYVTTGDSYSAPAAATSDSVLAMDLKTGKIKWHVQTYAGDAFTTACALPDADPAQKEGCGPDVDYGSSAILRTLPDGRRILLA 434          
BLAST of mRNA_M-pyrifera_M_contig97410.22436.1 vs. uniprot
Match: A0A800EC09_9CHLR (Cytochrome C oxidase Cbb3 n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A800EC09_9CHLR)

HSP 1 Score: 239 bits (611), Expect = 5.320e-74
Identity = 112/236 (47.46%), Postives = 153/236 (64.83%), Query Frame = 1
Query:    1 TGCAHWKFDTADAVRGAIVITELDDGRFVLLAGDRKAWFYAVDANSGELVWKDKVDDHDWALVTGSPKIYNDRVYVGVASFEELAGGSVTYECCTFRGSVLAYDIASGKRVWKSSTVLEPLVATKKTTTGVQLWGPSGVAVWSQPTIDPQAGVLYVTTGDSYSAPASKTSDSIIAMDLETGEIKWYVQTFPDDAFTAACTAPNADPVAQEGCGPDVDFGSSAILRTLPDGRRVLLA 708
            +GCA W ++ +  VR AI +  L +G   L  GD     Y++D N+G+  W  + DDHD A +TGSP  Y++R+Y+ ++S EE+AG    YECCTFRG V++ D  +G  +WK+ T+ E     KK + G QLW  SG AVW+ PTIDP+   +YV TGDSYS PA+  SD+++A D++TGE+KW  QT   DAFT ACT+   D    E  GPD+DFGSS +L T  DG+R+LLA
Sbjct:    8 SGCALWVYEASGGVRTAITLGNLGNGYISLFFGDLAGKAYSLDPNTGKENWTIQADDHDHARITGSPVYYDNRLYIPLSSLEEVAGSMHDYECCTFRGGVMSVDAKTGDTIWKTRTIAEIPSKRKKNSAGTQLWAHSGAAVWTAPTIDPETRSIYVVTGDSYSVPAAAESDAVMAFDMDTGEVKWTTQTLAGDAFTVACTSSREDAGCPENHGPDLDFGSSPVLTTNSDGKRLLLA 243          
BLAST of mRNA_M-pyrifera_M_contig97410.22436.1 vs. uniprot
Match: A0A3N5FVZ2_9GAMM (Cytochrome C oxidase Cbb3 n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5FVZ2_9GAMM)

HSP 1 Score: 242 bits (618), Expect = 4.050e-73
Identity = 126/239 (52.72%), Postives = 155/239 (64.85%), Query Frame = 1
Query:    1 TGCAHWKFDTADAVRGAIVITELDDG---RFVLLAGDRKAWFYAVDANSGELVWKDKVDDHDWALVTGSPKIYNDRVYVGVASFEELAGGSVTYECCTFRGSVLAYDIASGKRVWKSSTVLEPLVATKKTTTGVQLWGPSGVAVWSQPTIDPQAGVLYVTTGDSYSAPASKTSDSIIAMDLETGEIKWYVQTFPDDAFTAACTAPNADPVAQEGCGPDVDFGSSAILRTLPDGRRVLLA 708
            +GC HW F+ A AVR A+ I  +  G   R+    GD  A  YAVDA +G L+WK KVDD   A VTGSP+ +N R+YV +AS EE AG    YECC FRGS++A D A+GK++WK+ T+ EP   TKK   G+QLWGPSG  VWS PTID +   L VTTG++YS P S  SD+ +AMDL+TG+I W  Q    DA+TAAC  P+    A    GPD DF S  IL TLPDGRR L+A
Sbjct:  182 SGCIHWFFEAAAAVRSAVSIGRIGAGSTARYAAFFGDGTATAYAVDATTGTLLWKTKVDDFPVARVTGSPRFHNGRLYVPLASGEEAAGALPIYECCRFRGSIVALDAATGKQIWKTYTIEEPK-PTKKNKVGIQLWGPSGAPVWSSPTIDEKNNALLVTTGNNYSDPPSSMSDAFVAMDLDTGKILWARQMTAADAYTAACRLPDKTNCADSN-GPDFDFSSPPILVTLPDGRRALVA 418          
BLAST of mRNA_M-pyrifera_M_contig97410.22436.1 vs. uniprot
Match: A0A059XAJ3_9BACT (PQQ enzyme repeat (Fragment) n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A059XAJ3_9BACT)

HSP 1 Score: 234 bits (596), Expect = 1.740e-72
Identity = 119/239 (49.79%), Postives = 157/239 (65.69%), Query Frame = 1
Query:    1 TGCAHWKFDTADAVRGAIVITELDDG---RFVLLAGDRKAWFYAVDANSGELVWKDKVDDHDWALVTGSPKIYNDRVYVGVASFEELAGGSVTYECCTFRGSVLAYDIASGKRVWKSSTVLEPLVATKKTTTGVQLWGPSGVAVWSQPTIDPQAGVLYVTTGDSYSAPASKTSDSIIAMDLETGEIKWYVQTFPDDAFTAACTAPNADPVAQEGCGPDVDFGSSAILRTLPDGRRVLLA 708
            TGC  W F  + AVRGAI I  +D     R     GD     YAVDA +GE++WK KVD+H  A VTGS  +YN+R++VG AS EE+A  +  Y CCTFRGS++A + A+G  +WK+ TV EP  ATKK   G Q+WGPSG  +W+ PTIDPQ  ++YVTTGD+YS P +  SD+ +A D +TG+I W  Q  P+DA+T++C  P+      +  GPDVDF SSAIL +L  G+R L+A
Sbjct:   40 TGCVFWYFQASAAVRGAISIGRVDTASGRRDAAFFGDLGGNVYAVDAGTGEVLWKKKVDEHPLARVTGSVTLYNNRLFVGTASGEEIASVATDYACCTFRGSLMALNAATGATLWKTYTVDEPR-ATKKNKAGTQMWGPSGAPIWTAPTIDPQRNIVYVTTGDNYSDPTTANSDAFMAFDRDTGKILWSRQMTPNDAYTSSCRMPDKTN-CPDANGPDVDFASSAILVSLGGGKRALVA 276          
BLAST of mRNA_M-pyrifera_M_contig97410.22436.1 vs. uniprot
Match: A0A2V9DMR7_9BACT (Cytochrome C oxidase Cbb3 n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9DMR7_9BACT)

HSP 1 Score: 239 bits (611), Expect = 8.430e-72
Identity = 115/236 (48.73%), Postives = 158/236 (66.95%), Query Frame = 1
Query:    1 TGCAHWKFDTADAVRGAIVITELDDGRFVLLAGDRKAWFYAVDANSGELVWKDKVDDHDWALVTGSPKIYNDRVYVGVASFEELAGGSVTYECCTFRGSVLAYDIASGKRVWKSSTVLEPLVATKKTTTGVQLWGPSGVAVWSQPTIDPQAGVLYVTTGDSYSAPASKTSDSIIAMDLETGEIKWYVQTFPDDAFTAACTAPNADPVAQEGCGPDVDFGSSAILRTLPDGRRVLLA 708
            TGC HW F     VR AIV    +   + LL GD+  WFYA+ A +G L+WK ++D+H+   +TGSP  Y   V+VG AS+EE       Y CCTFRGSV A  +A G +VWK+ T+ +P   T+  + G Q WGPSG  VWS PT+D + GV+YVTTGD+YS+P++ TSD+++A+D+ TG+I+W+ QT P+DA+T+AC   N  P   E  GPD DFGSSA+L +LP G+ +L+A
Sbjct:  217 TGCLHWTFQANGPVRSAIVAVA-NGSDYSLLFGDQIGWFYALAAKTGRLLWKHRLDEHEGTRLTGSPAAYEGVVFVGAASWEETRSIEPHYACCTFRGSVTALRVADGSQVWKTYTI-DPPKKTRVNSAGTQQWGPSGAPVWSAPTMDAKRGVIYVTTGDNYSSPSTATSDAVMALDIATGKIRWFQQTTPNDAYTSACR--NRGPNCPEEDGPDYDFGSSALLLSLPGGKEILVA 448          
BLAST of mRNA_M-pyrifera_M_contig97410.22436.1 vs. uniprot
Match: A0A317IQD8_9BACT (Cytochrome C oxidase Cbb3 n=1 Tax=Acidobacteriia bacterium TaxID=2081523 RepID=A0A317IQD8_9BACT)

HSP 1 Score: 238 bits (606), Expect = 1.190e-71
Identity = 120/239 (50.21%), Postives = 155/239 (64.85%), Query Frame = 1
Query:    1 TGCAHWKFDTADAVRGAIVITELDDG---RFVLLAGDRKAWFYAVDANSGELVWKDKVDDHDWALVTGSPKIYNDRVYVGVASFEELAGGSVTYECCTFRGSVLAYDIASGKRVWKSSTVLEPLVATKKTTTGVQLWGPSGVAVWSQPTIDPQAGVLYVTTGDSYSAPASKTSDSIIAMDLETGEIKWYVQTFPDDAFTAACTAPNADPVAQEGCGPDVDFGSSAILRTLPDGRRVLLA 708
            TGC +W  D    VR AI + +LDD    R++   GD +A+ YAVDA +G+ VWK ++DD   A +TGSP  YN  +YVGV S EE AG +  YECC FRGSV+A D A+GK++WK+ T+ EP   T+K  +G QLWGPSG  VW+ P IDP    LYVTTGD+Y+ P ++TSD+ IAMDL TG+I W  Q    DA+T+AC  P+         GPD DF S  IL TL +G+R L+A
Sbjct:  149 TGCIYWYLDAGATVRSAITVAKLDDTSGTRYLAFFGDARAFAYAVDAATGKQVWKTRIDDFPLAGITGSPVFYNGWIYVGVRSGEEAAGATPDYECCRFRGSVVALDAATGKQIWKTYTIDEPK-RTRKNKSGTQLWGPSGAPVWNSPAIDPLRNALYVTTGDNYTEPTTRTSDAFIAMDLGTGKILWTRQMTETDAYTSACRLPDKTNCPDVN-GPDFDFSSPPILVTLANGKRALVA 385          
BLAST of mRNA_M-pyrifera_M_contig97410.22436.1 vs. uniprot
Match: A0A2V8VHA8_9BACT (Cytochrome C oxidase Cbb3 n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8VHA8_9BACT)

HSP 1 Score: 234 bits (596), Expect = 9.910e-70
Identity = 118/236 (50.00%), Postives = 154/236 (65.25%), Query Frame = 1
Query:    1 TGCAHWKFDTADAVRGAIVITELDDGRFVLLAGDRKAWFYAVDANSGELVWKDKVDDHDWALVTGSPKIYNDRVYVGVASFEELAGGSVTYECCTFRGSVLAYDIASGKRVWKSSTVLEPLVATKKTTTGVQLWGPSGVAVWSQPTIDPQAGVLYVTTGDSYSAPASKTSDSIIAMDLETGEIKWYVQTFPDDAFTAACTAPNADPVAQEGCGPDVDFGSSAILRTLPDGRRVLLA 708
            +GCA+W FD+   VR A+ I +    R VL  GD  A  YAVDA  GEL+WK K+D+H  A +TG+PK++  R+YV V+S EEL+G    YECC FRGSV+A D  +GK +WK+ T+ E     +K   G QLWGPSGV VW+ PT+DPQ  +LYV TGD+YS P   TSD+I+A++L++G+I W  Q    D F   C  P+      EG GPD DFGSS IL  LP+GR+ L+A
Sbjct:  203 SGCAYWTFDSEAPVRTAMSIGQTGP-REVLYFGDLHANVYAVDAAKGELLWKRKLDEHPEARITGAPKLHAGRLYVPVSSMEELSGADPAYECCRFRGSVVALDATTGKSIWKTYTIPEKAHPAQKNKIGTQLWGPSGVGVWNSPTVDPQRNMLYVGTGDNYSQPPVSTSDAILALNLDSGKILWTRQITSGDVFNFGCRIPDQTN-CPEGHGPDADFGSSPILVDLPNGRQALIA 436          
BLAST of mRNA_M-pyrifera_M_contig97410.22436.1 vs. uniprot
Match: A0A2V8BVZ7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8BVZ7_9BACT)

HSP 1 Score: 231 bits (588), Expect = 1.070e-69
Identity = 113/235 (48.09%), Postives = 151/235 (64.26%), Query Frame = 1
Query:    1 TGCAHWKFDTADAVRGAIVITELDDGRFVLLAGDRKAWFYAVDANSGELVWKDKVDDHDWALVTGSPKIYNDRVYVGVASFEELAGGSVTYECCTFRGSVLAYDIASGKRVWKSSTVLEPLVATKKTTTGVQLWGPSGVAVWSQPTIDPQAGVLYVTTGDSYSAPASKTSDSIIAMDLETGEIKWYVQTFPDDAFTAACTAPNADPVAQEGCGPDVDFGSSAILRTLPDGRRVLL 705
            +GC  W F     VR A  +  L   R  +  GD KA  +AVDA  GEL+WK K+D+H +A +TG+P + N R+YV V+S EE+ G   TYECCTFRGSV+A D + G ++WKS T+ E      +   G   WGP+G AVWS PTID + GVLY+ TG+SY+ PA KTSD++IAMDL+TG+I W+ Q    DAF   C   N +    +  GPD DFG++ ILR+LP G+R+L+
Sbjct:  236 SGCTQWSFQAESGVRSAPSVG-LIGRRAAVYFGDLKANVFAVDAAGGELIWKKKLDEHRFARITGAPTLANGRLYVPVSSVEEVPGAQPTYECCTFRGSVVALDASDGAQIWKSYTITETPQQAGRNAAGTPQWGPAGAAVWSSPTIDARRGVLYIGTGNSYTGPAVKTSDAVIAMDLKTGKILWFNQATSADAFLVGCRPGNEN--CPKDLGPDFDFGNAPILRSLPGGKRILV 467          
BLAST of mRNA_M-pyrifera_M_contig97410.22436.1 vs. uniprot
Match: A0A317HLR7_9BACT (Cytochrome C oxidase Cbb3 (Fragment) n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A317HLR7_9BACT)

HSP 1 Score: 233 bits (594), Expect = 1.300e-69
Identity = 120/239 (50.21%), Postives = 159/239 (66.53%), Query Frame = 1
Query:    1 TGCAHWKFDTADAVRGAIVITELDDG---RFVLLAGDRKAWFYAVDANSGELVWKDKVDDHDWALVTGSPKIYNDRVYVGVASFEELAGGSVTYECCTFRGSVLAYDIASGKRVWKSSTVLEPLVATKKTTTGVQLWGPSGVAVWSQPTIDPQAGVLYVTTGDSYSAPASKTSDSIIAMDLETGEIKWYVQTFPDDAFTAACTAPNADPVAQEGCGPDVDFGSSAILRTLPDGRRVLLA 708
            TGC HW F    AVR A++I  +      R V   GD+ A  YAVDA +G L+WK KV+D   A VTGSP ++N R+YV VAS EE A  +  Y+CC  RGSV+A D ++GK++WKS T+ E  + TKK+ TG QLWGPSG +VW+ PTID +  VLYV TG+++S P ++TSD+I+A+DLE+G+++W  Q    DA+T AC  P+    A    GPD DF SS IL T  +GRRVL+A
Sbjct:  180 TGCIHWFFAAERAVRTAVLIGRIRANGQLRSVAFFGDQNATAYAVDAANGSLLWKKKVEDFPGARVTGSPVVHNGRLYVPVASGEETAAATPDYQCCRSRGSVVALDASTGKQLWKSYTIPEEPLPTKKSPTGTQLWGPSGASVWNSPTIDVRRNVLYVGTGNNFSDPPTRTSDAIVAIDLESGKVRWVRQMTASDAWTVACRLPDKTNCADSN-GPDFDFSSSPILVTQSNGRRVLVA 417          
BLAST of mRNA_M-pyrifera_M_contig97410.22436.1 vs. uniprot
Match: A0A0D1P181_BRAEL (Cytochrome Cbb3 n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A0D1P181_BRAEL)

HSP 1 Score: 233 bits (593), Expect = 2.030e-69
Identity = 116/234 (49.57%), Postives = 150/234 (64.10%), Query Frame = 1
Query:    1 TGCAHWKFDTADAVRGAIVITELDDGRFVLLAGDRKAWFYAVDANSGELVWKDKVDDHDWALVTGSPKIYNDRVYVGVASFEELAGGSVTYECCTFRGSVLAYDIASGKRVWKSSTVLEPLVATKKTTTGVQLWGPSGVAVWSQPTIDPQAGVLYVTTGDSYSAPASKTSDSIIAMDLETGEIKWYVQTFPDDAFTAACTAPNADPVAQEGCGPDVDFGSSAILRTLPDGRRVL 702
            +GC  W F T   VR AI    LDD RF ++ GD +A  YAV+A +G L+WK KVDDH  A +TG+P +Y+  VYVGV+S EE  G   TY+CCTFRGSV+A   A+G ++WKS T+ E    T+    G QL+GP+G +VWS PTID Q   LYV T +SY+ PA+ TSD+++A DL TG + W+ Q  P D+F  AC   +     Q+  GPD DFG S IL +L DG RVL
Sbjct:  188 SGCTRWVFPTEAPVRAAISFASLDDNRFAVVFGDVRANVYAVNAATGALIWKSKVDDHPAARITGAPTVYSGVVYVGVSSIEEATGSRPTYQCCTFRGSVVALKAATGAQIWKSYTIPEAPQPTRTNGYGTQLFGPAGASVWSAPTIDVQRKALYVATSNSYADPATDTSDAVLAFDLATGRMLWHQQATPKDSFVVACFGFDQSNCPQDR-GPDYDFGQSPILVSLHDGHRVL 420          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97410.22436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DB07_9GAMM1.350e-12672.88Cytochrome C oxidase Cbb3 n=1 Tax=Gammaproteobacte... [more]
A0A800EC09_9CHLR5.320e-7447.46Cytochrome C oxidase Cbb3 n=1 Tax=Dehalococcoidia ... [more]
A0A3N5FVZ2_9GAMM4.050e-7352.72Cytochrome C oxidase Cbb3 n=1 Tax=Xanthomonadales ... [more]
A0A059XAJ3_9BACT1.740e-7249.79PQQ enzyme repeat (Fragment) n=1 Tax=uncultured ba... [more]
A0A2V9DMR7_9BACT8.430e-7248.73Cytochrome C oxidase Cbb3 n=1 Tax=Acidobacteria ba... [more]
A0A317IQD8_9BACT1.190e-7150.21Cytochrome C oxidase Cbb3 n=1 Tax=Acidobacteriia b... [more]
A0A2V8VHA8_9BACT9.910e-7050.00Cytochrome C oxidase Cbb3 n=1 Tax=Acidobacteria ba... [more]
A0A2V8BVZ7_9BACT1.070e-6948.09Uncharacterized protein (Fragment) n=1 Tax=Acidoba... [more]
A0A317HLR7_9BACT1.300e-6950.21Cytochrome C oxidase Cbb3 (Fragment) n=1 Tax=Blast... [more]
A0A0D1P181_BRAEL2.030e-6949.57Cytochrome Cbb3 n=3 Tax=Proteobacteria TaxID=1224 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97410contigM-pyrifera_M_contig97410:2..709 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score236.5
Seed ortholog evalue1.3e-59
Seed eggNOG ortholog1297865.APJD01000036_gene1467
Preferred namepvaA
KEGG rclassRC00296
KEGG koko:K03651,ko:K05889,ko:K12132
KEGG ReactionR00191,R03136
KEGG Pathwayko00230,ko02025,map00230,map02025
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PQQ-like domain
EggNOG OGs1PIDE@1224,2TTS3@28211,3JVPI@41294,COG1520@1,COG1520@2,COG2010@1,COG2010@2
EC1.1.2.6,2.7.11.1,3.1.4.53
COG Functional cat.C
Best tax levelBradyrhizobiaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons1
Model size708
Cds size708
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816890.9703605-CDS-M-pyrifera_M_contig97410:1..7091622816890.9703605-CDS-M-pyrifera_M_contig97410:1..709Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97410 2..709 -
1692278239.312907-CDS-M-pyrifera_M_contig97410:1..7091692278239.312907-CDS-M-pyrifera_M_contig97410:1..709Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97410 2..709 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97410.22436.1prot_M-pyrifera_M_contig97410.22436.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97410 2..709 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97410.22436.1

>prot_M-pyrifera_M_contig97410.22436.1 ID=prot_M-pyrifera_M_contig97410.22436.1|Name=mRNA_M-pyrifera_M_contig97410.22436.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp
TGCAHWKFDTADAVRGAIVITELDDGRFVLLAGDRKAWFYAVDANSGELV
WKDKVDDHDWALVTGSPKIYNDRVYVGVASFEELAGGSVTYECCTFRGSV
LAYDIASGKRVWKSSTVLEPLVATKKTTTGVQLWGPSGVAVWSQPTIDPQ
AGVLYVTTGDSYSAPASKTSDSIIAMDLETGEIKWYVQTFPDDAFTAACT
APNADPVAQEGCGPDVDFGSSAILRTLPDGRRVLLA
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mRNA from alignment at M-pyrifera_M_contig97410:2..709-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97410.22436.1 ID=mRNA_M-pyrifera_M_contig97410.22436.1|Name=mRNA_M-pyrifera_M_contig97410.22436.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig97410:2..709- (Macrocystis pyrifera P11B4 male)
ACGGGCTGCGCGCACTGGAAGTTCGACACGGCCGATGCGGTGCGCGGCGC GATCGTGATCACCGAACTCGACGACGGCCGTTTCGTGTTGCTGGCGGGCG ATCGCAAGGCATGGTTCTACGCCGTTGACGCAAACTCCGGTGAGCTCGTG TGGAAAGACAAGGTCGATGATCACGACTGGGCGCTCGTGACCGGTTCGCC GAAAATTTACAACGATCGGGTTTATGTCGGGGTCGCGTCGTTCGAGGAAC TCGCCGGCGGCTCGGTCACCTACGAATGCTGCACGTTTCGCGGCAGTGTG CTCGCCTACGACATTGCCTCGGGTAAACGCGTGTGGAAAAGCTCGACCGT ACTCGAGCCGCTCGTAGCGACGAAGAAGACGACAACCGGGGTGCAACTGT GGGGGCCGTCGGGGGTCGCCGTGTGGTCGCAGCCGACGATCGATCCGCAA GCCGGCGTGTTGTATGTCACGACCGGCGACAGTTATTCCGCACCGGCGTC GAAAACGAGCGATTCGATCATCGCGATGGATCTCGAGACCGGCGAAATCA AATGGTACGTACAGACGTTCCCGGATGACGCATTCACGGCGGCGTGCACG GCGCCGAACGCCGACCCGGTGGCGCAGGAAGGTTGCGGGCCTGATGTCGA TTTTGGTTCATCGGCGATCCTGCGCACGTTGCCGGACGGGCGTCGCGTCT TGCTCGCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97410:2..709-

>mRNA_M-pyrifera_M_contig97410.22436.1 ID=mRNA_M-pyrifera_M_contig97410.22436.1|Name=mRNA_M-pyrifera_M_contig97410.22436.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig97410:2..709- (Macrocystis pyrifera P11B4 male)
ACGGGCTGCGCGCACTGGAAGTTCGACACGGCCGATGCGGTGCGCGGCGC
GATCGTGATCACCGAACTCGACGACGGCCGTTTCGTGTTGCTGGCGGGCG
ATCGCAAGGCATGGTTCTACGCCGTTGACGCAAACTCCGGTGAGCTCGTG
TGGAAAGACAAGGTCGATGATCACGACTGGGCGCTCGTGACCGGTTCGCC
GAAAATTTACAACGATCGGGTTTATGTCGGGGTCGCGTCGTTCGAGGAAC
TCGCCGGCGGCTCGGTCACCTACGAATGCTGCACGTTTCGCGGCAGTGTG
CTCGCCTACGACATTGCCTCGGGTAAACGCGTGTGGAAAAGCTCGACCGT
ACTCGAGCCGCTCGTAGCGACGAAGAAGACGACAACCGGGGTGCAACTGT
GGGGGCCGTCGGGGGTCGCCGTGTGGTCGCAGCCGACGATCGATCCGCAA
GCCGGCGTGTTGTATGTCACGACCGGCGACAGTTATTCCGCACCGGCGTC
GAAAACGAGCGATTCGATCATCGCGATGGATCTCGAGACCGGCGAAATCA
AATGGTACGTACAGACGTTCCCGGATGACGCATTCACGGCGGCGTGCACG
GCGCCGAACGCCGACCCGGTGGCGCAGGAAGGTTGCGGGCCTGATGTCGA
TTTTGGTTCATCGGCGATCCTGCGCACGTTGCCGGACGGGCGTCGCGTCT
TGCTCGCGACGGGCTGCGCGCACTGGAAGTTCGACACGGCCGATGCGGTG
CGCGGCGCGATCGTGATCACCGAACTCGACGACGGCCGTTTCGTGTTGCT
GGCGGGCGATCGCAAGGCATGGTTCTACGCCGTTGACGCAAACTCCGGTG
AGCTCGTGTGGAAAGACAAGGTCGATGATCACGACTGGGCGCTCGTGACC
GGTTCGCCGAAAATTTACAACGATCGGGTTTATGTCGGGGTCGCGTCGTT
CGAGGAACTCGCCGGCGGCTCGGTCACCTACGAATGCTGCACGTTTCGCG
GCAGTGTGCTCGCCTACGACATTGCCTCGGGTAAACGCGTGTGGAAAAGC
TCGACCGTACTCGAGCCGCTCGTAGCGACGAAGAAGACGACAACCGGGGT
GCAACTGTGGGGGCCGTCGGGGGTCGCCGTGTGGTCGCAGCCGACGATCG
ATCCGCAAGCCGGCGTGTTGTATGTCACGACCGGCGACAGTTATTCCGCA
CCGGCGTCGAAAACGAGCGATTCGATCATCGCGATGGATCTCGAGACCGG
CGAAATCAAATGGTACGTACAGACGTTCCCGGATGACGCATTCACGGCGG
CGTGCACGGCGCCGAACGCCGACCCGGTGGCGCAGGAAGGTTGCGGGCCT
GATGTCGATTTTGGTTCATCGGCGATCCTGCGCACGTTGCCGGACGGGCG
TCGCGTCTTGCTCGCG
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