mRNA_M-pyrifera_M_contig974.22435.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig974.22435.1 vs. uniprot
Match: D7G8X2_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X2_ECTSI) HSP 1 Score: 417 bits (1072), Expect = 6.390e-124 Identity = 206/242 (85.12%), Postives = 219/242 (90.50%), Query Frame = 1 Query: 1 KGGKLSQYDRSLFQRLEANDHPVQLLDIQYRMHPTISAFPSATFYDSQLKDGDNVKLPAYSRAFHTHPIFQPFMFFDLTTGEQTRDGGGGSLSNLPEANLAVNVYLTLKRSFGGFGPAGSGDEHGIVGRVGVISPYAKQISVLRDTFKECLGHDWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFIVGSARALSVNPKWSELADLARGQGGLVKVRDP 726 +GGKLSQYDRSLFQRLEANDHPVQ+LD+QYRMHPTISAFPSATFYD +LKDG NV +PAYSRAFHTHPIFQPFMFFDLTTGEQTR GGGGSLSN EA LAVNVY+TLKRSFGG G GSGDEHGI GRVGVISPYAKQI VL++ F+E LG W ++VEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLF+VGSA ALSVNPKW ELADLA + GLVKV DP Sbjct: 531 QGGKLSQYDRSLFQRLEANDHPVQMLDVQYRMHPTISAFPSATFYDGKLKDGGNVSMPAYSRAFHTHPIFQPFMFFDLTTGEQTRRGGGGSLSNPMEAMLAVNVYVTLKRSFGGVGERGSGDEHGIAGRVGVISPYAKQIKVLKEKFEESLGRGWHEQVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAEALSVNPKWKELADLAESREGLVKVTDP 772
BLAST of mRNA_M-pyrifera_M_contig974.22435.1 vs. uniprot
Match: A0A6H5JH06_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH06_9PHAE) HSP 1 Score: 417 bits (1071), Expect = 2.450e-122 Identity = 209/251 (83.27%), Postives = 223/251 (88.84%), Query Frame = 1 Query: 1 KGGKLSQYDRSLFQRLEANDHPVQLLDIQYRMHPTISAFPSATFYDSQLKDGDNVKLPAYSRAFHTHPIFQPFMFFDLTTGEQTRDGGGGSLSNLPEANLAVNVYLTLKRSFGGFGPAGSGDEHGIVGRVGVISPYAKQISVLRDTFKECLGHDWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFIVGSARALSVNPKWSELADLARGQGGLVKVRDPFCDLLGLRP 753 +GGKLSQYDRSLFQRLEANDHPVQ+LD+QYRMHPTISA ATFYD +LKDG NV +PAYSRAFHTHPIFQPFMFFDLTTGEQTR GGGGSLSN EA LAVNVY+TLKRSFGG G GSGDEHGI GRVGVISPYAKQI VL++ F+E LG W ++VEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLF+VGSA ALSVNPKW ELADLA + GLVKV DP CDLL L+P Sbjct: 458 QGGKLSQYDRSLFQRLEANDHPVQMLDVQYRMHPTISA---ATFYDGKLKDGGNVTMPAYSRAFHTHPIFQPFMFFDLTTGEQTRRGGGGSLSNPMEAMLAVNVYVTLKRSFGGAGERGSGDEHGIAGRVGVISPYAKQIKVLKEKFEESLGRGWHEQVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAEALSVNPKWKELADLAERREGLVKVTDPRCDLLSLKP 705
BLAST of mRNA_M-pyrifera_M_contig974.22435.1 vs. uniprot
Match: W7TG92_9STRA (Helicase sen1 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG92_9STRA) HSP 1 Score: 248 bits (632), Expect = 4.640e-66 Identity = 136/259 (52.51%), Postives = 162/259 (62.55%), Query Frame = 1 Query: 7 GKLSQYDRSLFQRLEANDHPVQLLDIQYRMHPTISAFPSATFYDSQLKDGDNVKLPAYSRAFHTHPIFQPFMFFDLTTG-----EQTRDGGGG-SLSNLPEANLAVNVYLTLKRSFGGFGPAGSGDEHGIVGRVGVISPYAKQISVLRDTFKECLGHDWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFIVGSARALSVNPKWSELADLARGQGGLVKVRDPFCDLLGLRPERGR 765 G + ++RSLF+RLE HPV LLD QYRMHP ISAFP FY LKDG+NV PAYSR +H P FQPF F DL + ++ R+GGGG S N EA L VNVY TL+R G G+ G+VGVI+PY Q+ L F LG +Q+EVE++TVD QG+EKDVI+ S VRA G RGIGFLADVRRMNV LTR R + +VG A L N W L D AR G VKV P C+LLGL+ G+ Sbjct: 395 GAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAFPAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKG---------QGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGLQRGGGK 644
BLAST of mRNA_M-pyrifera_M_contig974.22435.1 vs. uniprot
Match: A0A4D9CTX5_9STRA (WW domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTX5_9STRA) HSP 1 Score: 249 bits (637), Expect = 7.580e-65 Identity = 137/262 (52.29%), Postives = 163/262 (62.21%), Query Frame = 1 Query: 7 GKLSQYDRSLFQRLEANDHPVQLLDIQYRMHPTISAFPSATFYDSQLKDGDNVKLPAYSRAFHTHPIFQPFMFFDLTTG-----EQTRDGGGG-SLSNLPEANLAVNVYLTLKRSFGGFGPAGSGDEHGIVGRVGVISPYAKQISVLRDTFKECLGHDWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFIVGSARALSVNPKWSELADLARGQGGLVKVRDPFCDLLGLRPERGRSAG 774 G + ++RSLF+RLE HPV LLD QYRMHP ISAFP FY LKDG+NV PAYSR +H P FQPF F DL + ++ R+GGGG S N EA L VNVY TL+R G G+ G+VGVI+PY Q+ L F LG +Q+EVE++TVD QG+EKDVI+ S VRA G RGIGFLADVRRMNV LTR R + +VG A L N W L D AR G VKV P C+LLGL+ G+ G Sbjct: 904 GAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAFPAFQPFTFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKG---------QGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGLQRGGGKGGG 1156
BLAST of mRNA_M-pyrifera_M_contig974.22435.1 vs. uniprot
Match: A0A7S4R098_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R098_9STRA) HSP 1 Score: 231 bits (589), Expect = 7.780e-59 Identity = 124/242 (51.24%), Postives = 160/242 (66.12%), Query Frame = 1 Query: 7 GKLSQYDRSLFQRLEANDHPVQLLDIQYRMHPTISAFPSATFYDSQLKDGDNVKLPAYS----RAFHTH-PIFQPFMFFDLTTGEQTRDGGGGSLSNLPEANLAVNVYLTLKRSFGGFGPAGSGDEHGIVGRVGVISPYAKQISVLRDTFKECLGHDWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFIVGSARALSVNPKWSELADLARGQGGLVKV 717 G+ ++YDRSLFQRLE H V LLD QYRMHP IS FP FY LKDG NV+ P Y R H+ P F+PF DL + E+ GG SLSN EA LA+++Y +LK GG RV VI+PY++Q ++LR TF E +G D++ VE++TVDAFQGRE +++I S VRAAGSRGIGFL+DVRRMNVALTRA+H LF++ R+++VNP W +L + AR +V+V Sbjct: 901 GRGTKYDRSLFQRLEEAGHDVHLLDTQYRMHPAISDFPRRIFYSGNLKDGPNVQHPEYGNPLRRMIHSKIPAFEPFTILDLDSAEER---GGTSLSNSAEARLALHLYKSLKDETGGLSAKS---------RVAVITPYSQQAALLRRTFSEAMGSDYEKAVEVNTVDAFQGREANIVIFSCVRAAGSRGIGFLSDVRRMNVALTRAKHFLFVIARCRSITVNPYWRDLVEHARENRAVVRV 1130
BLAST of mRNA_M-pyrifera_M_contig974.22435.1 vs. uniprot
Match: K0RJL7_THAOC (WW domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RJL7_THAOC) HSP 1 Score: 225 bits (573), Expect = 4.490e-57 Identity = 126/246 (51.22%), Postives = 158/246 (64.23%), Query Frame = 1 Query: 7 GKLSQYDRSLFQRLEANDHPVQLLDIQYRMHPTISAFPSATFYDSQLKDGDNVKLPAYSRA-----FHTHPIFQPFMFFDLTTGEQTRDGGGGSLSNLPEANLAVNVYLTLKRSFGGFGPAGSGDEHGIVGRVGVISPYAKQISVLRDTFKECLGHDWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFIVGSARALSVNPKWSELADLARGQGGLVKVRDPF 729 GK +++DRSLFQRLE H V LLD QYRMHP IS FP FYD +L DG NVK P Y F + FQPF DL E T D G S++N EA LA++++ L+ + GG GS RV VI+PY++Q ++LR TF LG +++ VEIS+VDAFQGRE ++I S VRAAGS+GIGFLADVRRMNVALTRA+H LF++ ++ VNP W +L A GQ +VKV PF Sbjct: 775 GKTTKFDRSLFQRLEEAGHEVHLLDTQYRMHPMISLFPRRIFYDGKLLDGPNVKHPEYGSPLKRTIFRSFGAFQPFTILDL---ESTEDRAGTSMANTAEAQLALHLFQNLRSATGG--QLGS--------RVAVITPYSQQAALLRRTFSSGLGSEYERSVEISSVDAFQGREAHIVIFSCVRAAGSKGIGFLADVRRMNVALTRAKHFLFVIARCSSIRVNPYWRDLVKHASGQSAVVKV--PF 1005
BLAST of mRNA_M-pyrifera_M_contig974.22435.1 vs. uniprot
Match: A0A7S1FTM4_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FTM4_9STRA) HSP 1 Score: 213 bits (541), Expect = 2.450e-56 Identity = 114/243 (46.91%), Postives = 159/243 (65.43%), Query Frame = 1 Query: 7 GKLSQYDRSLFQRLEANDHPVQLLDIQYRMHPTISAFPSATFYDSQLKDGDNVKLPAYSRAFHTH-----PIFQPFMFFDLTTGEQTRDGGGGSLSNLPEANLAVNVYLTLKRSFGGFGPAGSGDEHGIVGRVGVISPYAKQISVLRDTFKECLGHDW-QDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFIVGSARALSVNPKWSELADLARGQGGLVKV 717 G+ +++DRSLFQRLE HPV +LD QYRMHP ISAFP A FYD +L+DG NV+ Y R H P F+PF DL + E+ GG SL N EA LA+++Y L + P G G+V VI+PY +Q ++L+ TF++ LG + ++ VE++TVD+FQGRE ++I S VRAAGS GIGFL+DVRRMNVALTRA++ +F++ +++SVNP W +L D + ++K+ Sbjct: 179 GRNTKFDRSLFQRLEDAGHPVHMLDTQYRMHPAISAFPRAIFYDGRLQDGPNVRGNDYGRPLRDHVLRRFPAFRPFTILDLASNEER---GGTSLMNSAEAELALHLYRNLTEA-----PEGKA-----AGKVAVITPYTQQKNLLQRTFEKALGIEHCRNAVEVNTVDSFQGREAAIVIFSCVRAAGSHGIGFLSDVRRMNVALTRAKYFMFVIAHCKSISVNPYWKQLVDNSAAADAVLKI 408
BLAST of mRNA_M-pyrifera_M_contig974.22435.1 vs. uniprot
Match: A0A7S2XKM7_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKM7_9STRA) HSP 1 Score: 213 bits (541), Expect = 2.440e-55 Identity = 120/246 (48.78%), Postives = 151/246 (61.38%), Query Frame = 1 Query: 7 GKLSQYDRSLFQRLEANDHPVQLLDIQYRMHPTISAFPSATFYDSQLKDGDNVKLPAYSRAFHTH-----PIFQPFMFFDLTTGEQTRDGGGGSLSNLPEANLAVNVYLTLKRSFGGFGPAGSGDEHGIVGRVGVISPYAKQISVLRDTFKECLGHDWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFIVGSARALSVNPKWSELADLARGQGGLVKVRDPF 729 G+ ++YDRSLFQRLE H V LL+ QYRMHP IS FP FYD L DG NVK P Y P PF DL + E+ GG SL+N EA LAV++Y +L GG SG +V VI+PY++Q S+L F + LG + + VEI+TVDAFQGRE +++I S VRAAGS GIGFL+DVRRMNVALTRA+H LF++ +++ VNP W +L AR G +V V P Sbjct: 263 GRTTKYDRSLFQRLEEAGHEVHLLNTQYRMHPDISDFPRRIFYDGNLLDGPNVKHPDYGNPLRRTLTQRVPALSPFTVLDLDSSEER---GGTSLANSGEARLAVHLYQSLLTESGGL----SGQS-----KVAVITPYSQQASLLHRMFSKSLGPHYANRVEINTVDAFQGREANIVIFSCVRAAGSNGIGFLSDVRRMNVALTRAKHFLFVIARCQSIVVNPYWRDLVAHARETGAVVPVHMPM 496
BLAST of mRNA_M-pyrifera_M_contig974.22435.1 vs. uniprot
Match: A0A7S3QDL7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QDL7_9STRA) HSP 1 Score: 219 bits (557), Expect = 8.930e-55 Identity = 120/246 (48.78%), Postives = 156/246 (63.41%), Query Frame = 1 Query: 7 GKLSQYDRSLFQRLEANDHPVQLLDIQYRMHPTISAFPSATFYDSQLKDGDNV--KL---PAYSRAFHTHPIFQPFMFFDLTTGEQTRDGGGGSLSNLPEANLAVNVYLTLKRSFGGFGPAGSGDEHGIVGRVGVISPYAKQISVLRDTFKECLGHDWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFIVGSARALSVNPKWSELADLARGQGGLVKVRDPF 729 G+ ++YDRSLFQRLE H V LLD QYRMHP IS FP FY LKDG NV KL P R P F+PF FDL + E+ GG SLSN EA A+ +Y L + FG F +V VI+PYA+Q +++R TF + LG +++ VE++TVD+FQGRE +++I S VRAAGS+GIGFL+DVRRMNVALTRA+H LF++ +++SVNP W +L A+ +V V F Sbjct: 980 GRTTKYDRSLFQRLEEAGHEVHLLDTQYRMHPQISQFPRNIFYGGLLKDGPNVLGKLYGNPLRDRMMAKLPSFKPFTVFDLDSSEER---GGSSLSNATEARFALQLYQNLTKEFGIFVSTS---------KVSVITPYAQQAALIRQTFAQALGSEYRQLVEVNTVDSFQGREANIVIFSCVRAAGSKGIGFLSDVRRMNVALTRAKHFLFVIARCKSISVNPYWGQLVKHAKDSRAVVTVPRSF 1213
BLAST of mRNA_M-pyrifera_M_contig974.22435.1 vs. uniprot
Match: T0R7T3_SAPDV (Helicase ATP-binding domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R7T3_SAPDV) HSP 1 Score: 218 bits (556), Expect = 1.070e-54 Identity = 118/247 (47.77%), Postives = 158/247 (63.97%), Query Frame = 1 Query: 16 SQYDRSLFQRLEANDHPVQLLDIQYRMHPTISAFPSATFYDSQLKDGDNVKLPAYSRAFHT-HPIFQPFMFFDLTTGEQTRDGGGGSLSNLPEANLAVNVYLTLKRSFGGFGPAGSGDEHGIVGRVGVISPYAKQISVLRDTFKECLGHDWQDEVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFIVGSARALSVNPKWSELADLARGQGGLVKVRDPFCDLLGLRP 753 S Y+RSLF+RLE+ HPV +L QYR HPTISAFP A FY L+DGDNVK PAY + +H+ P F P +F+++ + ++ G S SN E LAVN+YLTL+ + I G+VGVI+PYA Q+ L+ F G D+ +VEI+TVD +QGREKD+II+STVRA +G+GFL+D+RRMNVALTRA+ +++GS L + W L D R +V V +P +LL LRP Sbjct: 945 SLYERSLFERLESCGHPVHMLRTQYRSHPTISAFPRAYFYGGLLQDGDNVKTPAYIKPYHSLAPAFLPLVFWNIVSSRES--AGPSSRSNQMEIELAVNLYLTLRNAC---------PPDAIRGKVGVITPYAFQMEELKKAFARVCGGDYAHDVEINTVDGYQGREKDIIILSTVRADPRKGVGFLSDIRRMNVALTRAKFACYVIGSEATLKSSKPWRALLDHTRSAQCMVHVTNPQENLLQLRP 1180 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig974.22435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig974.22435.1 >prot_M-pyrifera_M_contig974.22435.1 ID=prot_M-pyrifera_M_contig974.22435.1|Name=mRNA_M-pyrifera_M_contig974.22435.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1008bp KGGKLSQYDRSLFQRLEANDHPVQLLDIQYRMHPTISAFPSATFYDSQLKback to top mRNA from alignment at M-pyrifera_M_contig974:24154..30191- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig974.22435.1 ID=mRNA_M-pyrifera_M_contig974.22435.1|Name=mRNA_M-pyrifera_M_contig974.22435.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6038bp|location=Sequence derived from alignment at M-pyrifera_M_contig974:24154..30191- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig974:24154..30191- >mRNA_M-pyrifera_M_contig974.22435.1 ID=mRNA_M-pyrifera_M_contig974.22435.1|Name=mRNA_M-pyrifera_M_contig974.22435.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=6048bp|location=Sequence derived from alignment at M-pyrifera_M_contig974:24154..30191- (Macrocystis pyrifera P11B4 male)back to top |