mRNA_M-pyrifera_M_contig97345.22424.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97345.22424.1 vs. uniprot
Match: D2W0R0_NAEGR (Rab family small GTPase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2W0R0_NAEGR) HSP 1 Score: 100 bits (249), Expect = 3.670e-23 Identity = 58/172 (33.72%), Postives = 97/172 (56.40%), Query Frame = 1 Query: 4 YKLRLAGARRVGKTALVNRYIDGSFEESYIPTVGYDFRNRDEEVVCGGVSTRVRVQVWDIMGTEKIGFTPPAYYRRSAAVLFVYDASDAKSFRALRAICTDAQTRLAGEDTL-FFLVGTKSDLTSDSKVSDEDVSNFIRGFK--LDAHFVVSSKLDSDGGVRDMFLDITKRL 510 YK+ L G VGKT+L +++DGSF+E+YI T+G DF+ +D + + +++Q+WD G E+ YYR A VL VYD +D++SF+ ++ T+ + + +D + LVG K+DL + V E+ + F + +D F VS+K S V D F+ + + + Sbjct: 37 YKILLLGDAGVGKTSLAIKWVDGSFQENYIATIGVDFKKKDVTID----NQMIKLQIWDTAGQERYNTIQATYYRGCAGVLVVYDMTDSESFQNVQKWITNIEKNTSPQDDITVLLVGNKADLADERMVKTEEANAFCKNTSCVVDRVFEVSAK--SGQNVNDAFMALVEAI 202
BLAST of mRNA_M-pyrifera_M_contig97345.22424.1 vs. uniprot
Match: A0A7S4I5W8_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I5W8_9EUKA) HSP 1 Score: 100 bits (248), Expect = 6.360e-23 Identity = 60/173 (34.68%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 1 MYKLRLAGARRVGKTALVNRYIDGSFEESYIPTVGYDFRNRDEEV--VCGGVSTRVRVQVWDIMGTEKIGFTPPAYYRRSAAVLFVYDASDAKSFRALRAICTDAQTRLAGEDTLFFLVGTKSDLTSDSKVSDEDVSNFIRGFKLDAHFVVSSKLDSDGGVRDMFLDITKRLV 513 ++KL + G VGK+ LVNR+ F +S++ T+G DF+N +V C V++Q+WD G E+ ++YR + +LFVYD + SF+ L+ D A DT L+G K DL +V E F R +K++A F S+K S V D F++IT++L+ Sbjct: 8 VFKLIVIGDSGVGKSCLVNRFAGKEFSDSFVSTIGVDFKNVTIQVDGKC------VKLQIWDTAGQERFRTITSSFYRGTKGILFVYDVTKPNSFQNLKRWIADVDI-YASPDTQKILMGNKCDLFGQKRVPYESAVAFARSYKMNAFFEASAK--SKSNVEDAFIEITRKLM 171
BLAST of mRNA_M-pyrifera_M_contig97345.22424.1 vs. uniprot
Match: A0A6A5BEW9_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BEW9_NAEFO) HSP 1 Score: 97.8 bits (242), Expect = 4.200e-22 Identity = 58/176 (32.95%), Postives = 99/176 (56.25%), Query Frame = 1 Query: 4 YKLRLAGARRVGKTALVNRYIDGSFEESYIPTVGYDFRNRDEEVVCGGVSTRVRVQVWDIMGTEKIGFTPPAYYRRSAAVLFVYDASDAKSFRALRAICTDAQTRLA-GEDTLFFLVGTKSDLTSDSKVSDEDVSNFIRGFK--LDAHFVVSSKLDSDGGVRDMFLDITKRLVDRR 522 YK+ + G VGKT+L +++DGSF+E+YI T+G DF+ +D VV + +++Q+WD G E+ YYR A ++ VYD +DA SF+ ++ + + + +D LVG K+DL + V ED +NF + +D F VS+K S V + F+ + + + +++ Sbjct: 38 YKILILGDAGVGKTSLAIKWVDGSFQENYIATIGVDFKKKD--VVID--NQLIKLQIWDTAGQERYNTIQATYYRGCAGIIVVYDITDADSFQNVQKWIGNIEKNTSPNDDITILLVGNKADLEDERMVKTEDANNFCKNTSCVVDKVFEVSAK--SGLNVNNAFMALVEAIHNKK 207
BLAST of mRNA_M-pyrifera_M_contig97345.22424.1 vs. uniprot
Match: A0A6A5BCX7_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BCX7_NAEFO) HSP 1 Score: 100 bits (250), Expect = 8.690e-22 Identity = 60/176 (34.09%), Postives = 99/176 (56.25%), Query Frame = 1 Query: 4 YKLRLAGARRVGKTALVNRYIDGSFEESYIPTVGYDFRNRDEEVVCGGVSTRVRVQVWDIMGTEKIGFTPPAYYRRSAAVLFVYDASDAKSFRALRA-ICTDAQTRLAGEDTLFFLVGTKSDLTSDSKVSDEDVSNFIRGFK--LDAHFVVSSKLDSDGGVRDMFLDITKRLVDRR 522 YK+ + G VGKT+L +++DGSF+E+YI T+G DF+ +D VV + +++Q+WD G E+ YYR A ++ VYD +DA SF+ ++ I D + +D LVG K+DL + V ED +NF + +D F VS+K S V + F+ + + + +++ Sbjct: 38 YKILILGDAGVGKTSLAIKWVDGSFQENYIATIGVDFKKKD--VVID--NQLIKLQIWDTAGQERYNTIQATYYRGCAGIIVVYDITDADSFQNVQKWIGNDEKNTSPNDDITILLVGNKADLEDERMVKTEDANNFCKNTSCVVDKVFEVSAK--SGLNVNNAFMALVEAIHNKK 207
BLAST of mRNA_M-pyrifera_M_contig97345.22424.1 vs. uniprot
Match: A0A524FKW6_9ARCH (GTP-binding protein n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A524FKW6_9ARCH) HSP 1 Score: 95.1 bits (235), Expect = 2.440e-21 Identity = 52/175 (29.71%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 1 MYKLRLAGARRVGKTALVNRYIDGSFEESYIPTVGYDFRNRDEEVVCGGVSTRVRVQVWDIMGTEKIGFTPPAYYRRSAAVLFVYDASDAKSFRALRAICTDAQTRLAGEDTLFFLVGTKSDLTSDSKVSDEDVSNFIRGFKLDAHFVVSSKLDSDGGVRDMFLDITKRLVDRRG 525 ++K+ + G VGKT+L+N++++ +FEE Y PT+G + +D E+ ++T+VR+ VWD+ G EK YY+ L VYD + +F + A D + + ++ L+G KSDL S +S+ED S S+KL + V + F + +++++G Sbjct: 10 VFKIVILGDSAVGKTSLINQFVENAFEEDYKPTLGANIIRKDVELE--DLNTKVRLIVWDLAGQEKYNVVRSLYYQGCVGALLVYDITRTSTFNNIEAKWLDDFKKYVKREGVYLLIGNKSDLISQRMISNEDGSKLAEKINASKFVETSAKLGEN--VDNAFKSLVSEILEKQG 180
BLAST of mRNA_M-pyrifera_M_contig97345.22424.1 vs. uniprot
Match: I1BM56_RHIO9 (GTP-binding protein ypt1 n=17 Tax=Mucorales TaxID=4827 RepID=I1BM56_RHIO9) HSP 1 Score: 94.7 bits (234), Expect = 6.010e-21 Identity = 58/175 (33.14%), Postives = 89/175 (50.86%), Query Frame = 1 Query: 1 MYKLRLAGARRVGKTALVNRYIDGSFEESYIPTVGYDFRNRDEEVVCGGVSTRVRVQVWDIMGTEKIGFTPPAYYRRSAAVLFVYDASDAKSFRALRAICTDAQTRLAGEDTLFFLVGTKSDLTSDSKVSDEDVSNFIRGFKLDAHFVVSSKLDSDGGVRDMFLDITKRLVDRRG 525 ++KL L G VGK+ L+ R+ D ++ ESYI T+G DF+ R E+ V++Q+WD G E+ +YYR + ++ VYD +D SF+ ++ + R A E LVG KSDLT VS E + F K+ ++ + V FL + K++ DR G Sbjct: 12 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELE----GKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDEDSFQHVKQWMQEID-RYAAEGVNKLLVGNKSDLTDKKAVSTEQANEFAESIKIS---LLETSAKDATNVEQAFLTMAKQIKDRMG 178
BLAST of mRNA_M-pyrifera_M_contig97345.22424.1 vs. uniprot
Match: A0A3M7SHJ1_BRAPC (Ras-related protein Rab-21 n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7SHJ1_BRAPC) HSP 1 Score: 94.4 bits (233), Expect = 9.650e-21 Identity = 57/172 (33.14%), Postives = 93/172 (54.07%), Query Frame = 1 Query: 4 YKLRLAGARRVGKTALVNRYIDGSFEESYIPTVGYDFRNRDEEVVCGGVSTRVRVQVWDIMGTEKIGFTPPAYYRRSAAVLFVYDASDAKSFRALRAICTDAQTRLAGEDTLFFLVGTKSDLTSDSKVSDEDVSNFIRGFKLDAHFVVSSKLDSDGGVRDMFLDITKRLVDR 519 +K+ L G VGKT+L+ RY+ F + ++ T+ F + ++ G S V + +WD G EK P YYR S VYD +D SF +R T+ +T L G+D + +VG KSDL + V ++ + + H+ S+KL+ GV ++FLDI+KR++++ Sbjct: 8 FKIVLLGEGCVGKTSLMLRYVQDKFNDEHLSTIQAAFIKK--KIRIG--SNSVELAIWDTAGQEKYHALGPIYYRGSNGAFLVYDITDIDSFERIRKWVTELKTSL-GDDCILCIVGNKSDLEKNRNVPIKEAEEYAKSVGA-KHYSTSAKLNQ--GVNELFLDISKRMIEK 171
BLAST of mRNA_M-pyrifera_M_contig97345.22424.1 vs. uniprot
Match: S7XTQ9_SPRLO (GTP-binding protein YPT1 n=1 Tax=Spraguea lophii (strain 42_110) TaxID=1358809 RepID=S7XTQ9_SPRLO) HSP 1 Score: 94.0 bits (232), Expect = 1.020e-20 Identity = 49/172 (28.49%), Postives = 92/172 (53.49%), Query Frame = 1 Query: 1 MYKLRLAGARRVGKTALVNRYIDGSFEESYIPTVGYDFRNRDEEVVCGGVSTRVRVQVWDIMGTEKIGFTPPAYYRRSAAVLFVYDASDAKSFRALRAICTDAQTRLAGEDTLFFLVGTKSDLTSDSKVSDEDVSNFIRGFKLDAHFVVSSKLDSDGGVRDMFLDITKRLVD 516 ++K+ L G VGKT L+NRYID + + YI T+G DF+ + E+ + ++++Q+WD G E+ +YYR + A++ V+D +D SF L + + + +D ++G K D+ + D+ + F+ K+D + D V++MF I+++L++ Sbjct: 7 IFKIILIGNSGVGKTCLINRYIDNIYNQGYISTIGVDFKIKTVELD----NRKIKLQIWDTAGQERFRTITSSYYRGADAIIVVFDLTDKDSFNELNSWLLEIERHT--KDVFKIVLGNKVDMKERILIEDKAIDKFLEENKMDKEYFAKVSAKKDVLVKEMFEKISRKLME 172
BLAST of mRNA_M-pyrifera_M_contig97345.22424.1 vs. uniprot
Match: A0A0T6BBL2_9SCAR (Ras-related protein Rab-21 n=1 Tax=Oryctes borbonicus TaxID=1629725 RepID=A0A0T6BBL2_9SCAR) HSP 1 Score: 93.2 bits (230), Expect = 2.680e-20 Identity = 56/172 (32.56%), Postives = 90/172 (52.33%), Query Frame = 1 Query: 4 YKLRLAGARRVGKTALVNRYIDGSFEESYIPTVGYDFRNRDEEVVCGGVSTRVRVQVWDIMGTEKIGFTPPAYYRRSAAVLFVYDASDAKSFRALRAICTDAQTRLAGEDTLFFLVGTKSDLTSDSKVSDEDVSNFIRGFKLDAHFVVSSKLDSDGGVRDMFLDITKRLVDR 519 +K+ L G VGKT+L+ RYI+ +F ++I TV F + + RV + +WD G E+ P YYR S + VYD +DA SF ++ + + ++ G D +VG K+DL + VS E+ + HF S+KLD GV D+FL +T +++++ Sbjct: 8 FKVVLVGEGCVGKTSLILRYIENTFNSNHITTVQASFLKKKLNID----GQRVNLAIWDTAGQEQFHALGPLYYRNSNGAVLVYDITDASSFPKVKVWVKELR-KMLGNDVCLVIVGNKTDLEKERHVSLEEAEQYSEAVGA-IHFQTSAKLDE--GVEDVFLGLTNKMLEQ 171
BLAST of mRNA_M-pyrifera_M_contig97345.22424.1 vs. uniprot
Match: A0A8J6E2G6_9EUKA (Small GTPase superfamily, ARF type n=2 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6E2G6_9EUKA) HSP 1 Score: 92.4 bits (228), Expect = 4.150e-20 Identity = 58/173 (33.53%), Postives = 92/173 (53.18%), Query Frame = 1 Query: 1 MYKLRLAGARRVGKTALVNRYIDGSFEESYIPTVGYDFRNRDEEVVCGGVSTRVRVQVWDIMGTEKIGFTPPAYYRRSAAVLFVYDASDAKSFRALRAICTDAQTRLAGEDTLFFLVGTKSDLTSDSKVSDEDVSNFIRGFKLDAHFVVSSKLDSDGGVRDMFLDITKRLVDR 519 ++KL L G VGK+ L+ R+ + ++ ESYI T+G DF+ R E+ ++ +++Q+WD G E+ AYYR + ++ VYD +D ++F +R + + R A ED LVG K DL V + F LD F+ +S D+ V D F I+K L++R Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFAEDTYTESYISTIGVDFKIRTVEID----NSTIKLQIWDTAGQERFKTITAAYYRGAHGIIVVYDVTDVETFNNVR-VWLEEINRYASEDVCKLLVGNKCDLEDRKAVEYQTAKTFAES--LDISFIETSAKDAMR-VDDAFTIISKTLLER 172 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97345.22424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97345.22424.1 >prot_M-pyrifera_M_contig97345.22424.1 ID=prot_M-pyrifera_M_contig97345.22424.1|Name=mRNA_M-pyrifera_M_contig97345.22424.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp MYKLRLAGARRVGKTALVNRYIDGSFEESYIPTVGYDFRNRDEEVVCGGVback to top mRNA from alignment at M-pyrifera_M_contig97345:178..711+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97345.22424.1 ID=mRNA_M-pyrifera_M_contig97345.22424.1|Name=mRNA_M-pyrifera_M_contig97345.22424.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig97345:178..711+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97345:178..711+ >mRNA_M-pyrifera_M_contig97345.22424.1 ID=mRNA_M-pyrifera_M_contig97345.22424.1|Name=mRNA_M-pyrifera_M_contig97345.22424.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig97345:178..711+ (Macrocystis pyrifera P11B4 male)back to top |