mRNA_M-pyrifera_M_contig9733.22418.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9733.22418.1 vs. uniprot
Match: D7G6Q1_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q1_ECTSI) HSP 1 Score: 323 bits (828), Expect = 1.610e-108 Identity = 171/258 (66.28%), Postives = 193/258 (74.81%), Query Frame = 1 Query: 1 MEELLNTPMELGRNPDDYFNQKHLLRHKAEKMEEIISDRYFKDICVTGFTDEYKDVKIIMYRDLNFNVDQMQTTMRHMFLHEQSRKGPKGGIAGKGFAMAT--STPTTCFECGESEHNRRNCPQRRGEGRKQKPKPAGASKWCSIHFTTKHSDEACYEQGAKRPEKSG-DTGKAFTAXXXXXXXXXXXXKKDSATAKEASNTKAAIDFNADGDESDEGFMYATVPSGKKAEANSLEATLPVDTGATETMLDDRLIPGL 765 ME+L NT ME G+NPDDYFN KHLLRHK EKM E ISDRYFKD+CVTGFT EYK+VK+IM+RD NFNV+ MQTTM HM L EQSRKG KGGIAG+GF M T S TCF CGE H RRNC QRRG+GR++K KPAGA+KWC HFTTK+SDE CY QGAKRP T KAF+A +K+ TAKEAS+TKAAID + DGDESDEGFMYAT +G + EAN+ TL V+ GATETM DDRLIP L Sbjct: 1 MEKLDNTSMEPGQNPDDYFNHKHLLRHKVEKMGEKISDRYFKDMCVTGFTHEYKNVKMIMHRDPNFNVNHMQTTMHHMALDEQSRKGSKGGIAGRGFPMVTTASEQETCFGCGEKGHIRRNCLQRRGKGRQRKTKPAGATKWCCFHFTTKNSDEECYGQGAKRPITDQISTDKAFSACAHCAHFSSTSDRKELTTAKEASSTKAAIDSSTDGDESDEGFMYATTRTGMEVEANAEGVTLLVEIGATETMRDDRLIPHL 258
BLAST of mRNA_M-pyrifera_M_contig9733.22418.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE) HSP 1 Score: 303 bits (775), Expect = 3.740e-94 Identity = 169/300 (56.33%), Postives = 200/300 (66.67%), Query Frame = 1 Query: 1 MEELLNTPMELGRNPDDYFNQKHLLRHKAEKMEEIISDRYFKDICVTGFTDEYKDVKIIMYRDLNFNVDQMQTTMRHMFLHEQSRKGPKGGIAGKGFAMA--TSTPTTCFECGESEHNRRNCPQRRGEGRKQKPKPAGASKWCSIHFTTKHSDEACYEQGAKRPEKSGDTGKAFTAXXXXXXXXXXXXKKDSA-TAKEASNTKAAIDFNADGDESDEGFMYATVPSGKKAEANSLEAT------------------------------------------LPVDTGATETMLDDRLIPGL 765 MEEL+NTPME +NPDDYFNQKHLLRHKAEKM E ISD YF D CVTGFT+EYKDVK+IMYRD +FNVD+MQTTMRHMFL EQSR GPKG IAG+GFAM TS TCF+CGE H RNC ++RG+G+K K KPAGA+KWCS+HFTT+HSDE C+EQGA RP+KS +TGKA +A K + A T +EAS+T+A IDF+A+G ES+EGFMYA V G+ + + AT L +DTGA+E MLDD LIPGL Sbjct: 116 MEELINTPMEPRQNPDDYFNQKHLLRHKAEKMGETISDCYFNDECVTGFTNEYKDVKMIMYRDPDFNVDKMQTTMRHMFLDEQSRNGPKGSIAGRGFAMTATTSEEPTCFDCGEKGHIWRNCSEKRGKGKK-KTKPAGAAKWCSVHFTTRHSDEECFEQGATRPKKSSNTGKALSACASCTHCFSTSNKTELAMTKQEASSTQAEIDFSAEG-ESEEGFMYAIVHKGEDLKPMATGATPLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLIDTGASENMLDDCLIPGL 413
BLAST of mRNA_M-pyrifera_M_contig9733.22418.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE) HSP 1 Score: 255 bits (651), Expect = 6.650e-77 Identity = 142/256 (55.47%), Postives = 170/256 (66.41%), Query Frame = 1 Query: 1 MEELLNTPMELGRNPDDYFNQKHLLRHKAEKMEEIISDRYFKDICVTGFTDEYKDVKIIMYRDLNFNVDQMQTTMRHMFLHEQSRKGPKGGIAGKGFAMATS-TPTTCFECGESEHNRRNCPQRRGEGRKQKPKPAGASKWCSIHFTTKHSDEACYEQGAKRPEKSGDTGKAFTAXXXXXXXXXXXXKKDSATAKEASNTKAAIDFNADGDESDEGFMYATVP--SGKKAEANSLEATLPVDTGATETMLDDRLIP 759 MEEL N PM G NPDDYFNQKHLLR + +KM E ISDR FKDICV GF+DEYKDVK++++RD FNV M +TMR++FL EQSRKG KG IAG+GFAMAT+ + C C E H RRNCP+ + +K K KPAGA+KWCS H TT HSDE CY+QG KRPE + D+ K FTA K DS +N A +DF D D D GFM+AT SG+ A+S L VD+ A+ETM D+RLIP Sbjct: 156 MEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAKK-KTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSNKVFTACSNCTHCSSASKKDDS------NNEVAVVDFTRDEDAFDSGFMFATCSRISGRNFAASSTGVRLVVDSEASETMFDNRLIP 404
BLAST of mRNA_M-pyrifera_M_contig9733.22418.1 vs. uniprot
Match: A0A6H5JKH7_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKH7_9PHAE) HSP 1 Score: 252 bits (644), Expect = 4.440e-75 Identity = 150/257 (58.37%), Postives = 179/257 (69.65%), Query Frame = 1 Query: 1 MEELLNTPMELGRNPDDYFNQKHLLRHKAEKMEEIISDRYFKDICVTGFTDEYKDVKIIMYRDLNFNVDQMQTTMRHMFLHEQSRKGPKGGIAGKGFAMATS-TPTTCFECGESEHNRRNCPQRRGEGRKQKPKPAGASKWCSIHFTTKHSDEACYEQGAKRPEKSGDTGKAFTAXXXXXXXXXXXXKKDSATAKEASNTKAAIDFNADGDESDEGFMYATVP--SGKKAEANSLEATLPVDTGATETMLDDRLIPG 762 MEEL N PM G NPDDYFNQKHLLR + +KM E ISDR FKDICV GF+DEYKDVK++++RD F+V MQ+TMR++FL EQSRKG KG IAG+GFAMAT+ + C+E G H RRNCP+ + +K K KPAGA+KWCS H TT HSDE CY+QG KRPE + D+ KAFTA XXXXXXXK DS +N A +DF D D D GFM+AT S + A S L VDTG +ET+LD+RLI G Sbjct: 1 MEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFSVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICYEPG---HIRRNCPKIKNRAKK-KTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSSKAFTACSDCTXXXXXXXKNDS------NNEVAVVDFTRDEDAFDSGFMFATCSRISKRNLAATSTGVGLLVDTGVSETILDNRLIAG 247
BLAST of mRNA_M-pyrifera_M_contig9733.22418.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE) HSP 1 Score: 245 bits (625), Expect = 1.140e-73 Identity = 143/264 (54.17%), Postives = 178/264 (67.42%), Query Frame = 1 Query: 1 MEELLNTPMELGRNPDDYFNQKHLLRHKAEKMEEIISDRYFKDICVTGFTDEYKDVKIIMYRDLNFNVDQMQTTMRHMFLHEQSRKGPKGGIAGKGFAMATSTP-TTCFECGESEHNRRNCPQRRGEG-RKQKPKPAGASKWCSIHFTTKHSDEACYEQGAKRPEKSGDTGKAFTAXXXXXXXXXXXXKKDSA-----TAKEASNT-KAAIDFNADGDESDEGFMYATV---PSGKKAEANSLEATLPVDTGATETMLDDRLIP 759 +++L T ME G NPDD+FN+KH LR + EKM E ISDR FKDICV GF+++YKD+K++++RD +F+V QMQ TMR++FL EQ RK KG IAG+GFAMAT T CFEC E H RRNCP R+ EG R +K KPAGA+KWCS+H TT HSDE CY QGAKRPE+ TGKAF+A XXXXX + T KE T KA +DF+ D D GFMY + SG+ + + VD+GA+ETM D+RLIP Sbjct: 136 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHXXXXXTQSRDTHAKPTKRETPKETEKTEKAEVDFSYDEDTFKGGFMYHAICSKGSGRTFTTTATGTSALVDSGASETMFDNRLIP 396
BLAST of mRNA_M-pyrifera_M_contig9733.22418.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE) HSP 1 Score: 244 bits (624), Expect = 1.240e-72 Identity = 135/261 (51.72%), Postives = 169/261 (64.75%), Query Frame = 1 Query: 1 MEELLNTPMELGRNPDDYFNQKHLLRHKAEKMEEIISDRYFKDICVTGFTDEYKDVKIIMYRDLNFNVDQMQTTMRHMFLHEQSRKGPKGGIAGKGFAMATSTP-TTCFECGESEHNRRNCPQRRGEG-RKQKPKPAGASKWCSIHFTTKHSDEACYEQGAKRPEKSGDTGKAFTAXXXXXXXXXXXXKKDSAT---AKEASNTKAAIDFNADGDESDEGFMY---ATVPSGKKAEANSLEATLPVDTGATETMLDDRLIP 759 +++L T ME G NPDD+FN+KH LR + EKM E ISDR FKDICV GF+++YKD+K++++RD +F+V QMQ TMR++FL EQ RK KG IAG+GFAMAT T CFEC E H RRNCP R+ EG R +K KPAGA+KWCS+H TT HSDE CY QGAKRPE++G A T K + T + KA IDF+ D D GFMY + SG+ + + VD+GA+ETM DDRLIP Sbjct: 136 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPERTGKAFSACTHCVHCSTQSRDTHAKPTTTETPTETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIP 396
BLAST of mRNA_M-pyrifera_M_contig9733.22418.1 vs. uniprot
Match: A0A6H5JZ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ53_9PHAE) HSP 1 Score: 239 bits (611), Expect = 1.300e-72 Identity = 137/258 (53.10%), Postives = 167/258 (64.73%), Query Frame = 1 Query: 1 MEELLNTPMELGRNPDDYFNQKHLLRHKAEKMEEIISDRYFKDICVTGFTDEYKDVKIIMYRDLNFNVDQMQTTMRHMFLHEQSRKGPKGGIAGKGFAMATS-TPTTCFECGESEHNRRNCPQRRGEGRKQKPKPAGASKWCSIHFTTKHSDEACYEQ--GAKRPEKSGDTGKAFTAXXXXXXXXXXXXKKDSATAKEASNTKAAIDFNADGDESDEGFMYATVP--SGKKAEANSLEATLPVDTGATETMLDDRLIP 759 MEEL N PM G NPDDYFNQKH L + +KM E ISDR FKDICV GF+DEY+DVK++++RD FNV MQ+TMR+++L EQSRKG KG IAG+GFAMAT+ + C C E H RRNCP+ + +K K KPAGA+KWCS H TT HSDE CY+Q G K PE + D+ KAFT K DS +N +DF D D D GFM+AT SG+ A+S L VDTGA+ TM D+RL+P Sbjct: 1 MEELENNPMNPGENPDDYFNQKHPLCVQLDKMGEPISDRRFKDICVQGFSDEYEDVKLMLFRDPTFNVLDMQSTMRNIYLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAKK-KTKPAGATKWCSKHNTTSHSDEECYQQXQGGKCPEDTKDSSKAFTPCSDCTHCSSTCNKHDS------NNEVTVVDFTRDEDAFDSGFMFATCSRISGRNFAASSTGVGLLVDTGASATMFDNRLMP 251
BLAST of mRNA_M-pyrifera_M_contig9733.22418.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE) HSP 1 Score: 234 bits (597), Expect = 2.520e-72 Identity = 132/221 (59.73%), Postives = 157/221 (71.04%), Query Frame = 1 Query: 1 MEELLNTPMELGRNPDDYFNQKHLLRHKAEKMEEIISDRYFKDICVTGFTDEYKDVKIIMYRDLNFNVDQMQTTMRHMFLHEQSRKGPKGGIAGKGFAMATS-TPTTCFECGESEHNRRNCPQRRGEGRKQKPKPAGASKWCSIHFTTKHSDEACYEQGAKRPEKSGDTGKAFTAXXXXXXXXXXXXKKDSATAKEASNTKAAIDFNADGDESDEGFMYAT 660 MEEL N PM G NPD+YFNQKHLLR + +KM E ISDR FKDICV GF+DEYKDVK++++RD FNV MQ+TMR++FL EQSRKG KG IAG+GFAMAT+ + C C E H RRNCP+ + +K K KPAGA+KWCS H TT HSDE CY+QG KRPE + D+ KAFTA XXXXXX K DS ++ A +DF D D D GFM+AT Sbjct: 138 MEELENNPMNPGENPDNYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAKK-KTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSSKAFTACSNCTXXXXXXNKHDS------NDEVAVVDFTRDEDAFDSGFMFAT 351
BLAST of mRNA_M-pyrifera_M_contig9733.22418.1 vs. uniprot
Match: A0A6H5KXR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR7_9PHAE) HSP 1 Score: 234 bits (598), Expect = 2.730e-72 Identity = 135/257 (52.53%), Postives = 166/257 (64.59%), Query Frame = 1 Query: 1 MEELLNTPMELGRNPDDYFNQKHLLRHKAEKMEEIISDRYFKDICVTGFTDEYKDVKIIMYRDLNFNVDQMQTTMRHM-FLHEQSRKGPKGGIAGKGFAMATS-TPTTCFECGESEHNRRNCPQRRGEGRKQKPKPAGASKWCSIHFTTKHSDEACYEQGAKRPEKSGDTGKAFTAXXXXXXXXXXXXKKDSATAKEASNTKAAIDFNADGDESDEGFMYATVP--SGKKAEANSLEATLPVDTGATETMLDDRLIP 759 MEEL N PM G NPDDYFNQKHL+R + +KM E ISDR KDI V GF+DEY+DVK++++RD FN MQ+T+R+ + +EQSRKG KG IAG+GFAMAT+ + C C E H RRNCP+ + +K K KPAGA+KWC H TT HSDE CY+QG KRPE + D+ KAFTA K DS +N A DF D D D GFM+ T S + A+S + L VDTGA+ETM D+RLIP Sbjct: 96 MEELENNPMNPGENPDDYFNQKHLIRAQLDKMGEPISDRRCKDIWVQGFSDEYRDVKLMVFRDPTFNALGMQSTIRNTSWTNEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAKK-KTKPAGATKWCCKHNTTSHSDEECYQQGGKRPEDTKDSSKAFTACSDCTHCSSAPNKNDS------NNEVAVADFTRDEDAFDSGFMFGTCSRISERNFAASSTGSILLVDTGASETMFDNRLIP 345
BLAST of mRNA_M-pyrifera_M_contig9733.22418.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE) HSP 1 Score: 245 bits (625), Expect = 4.560e-71 Identity = 137/261 (52.49%), Postives = 171/261 (65.52%), Query Frame = 1 Query: 1 MEELLNTPMELGRNPDDYFNQKHLLRHKAEKMEEIISDRYFKDICVTGFTDEYKDVKIIMYRDLNFNVDQMQTTMRHMFLHEQSRKGPKGGIAGKGFAMATSTP-TTCFECGESEHNRRNCPQRRGEG-RKQKPKPAGASKWCSIHFTTKHSDEACYEQGAKRPEKSGDTGKAFTAXXXXXXXXXXXXKKDSATA--KEASNTKAA-IDFNADGDESDEGFMY---ATVPSGKKAEANSLEATLPVDTGATETMLDDRLIP 759 +++L T ME G NPDD+FN+KH LR + EKM E ISDR FKDICV GF+++YKD+K++++RD +F+V QMQ TMR++FL EQ RK KG IAG+GFAMAT T CFEC E H RRNCP R+ EG R +K KPAGA+KWCS+H TT HSDE CY QGAKRPE++G A T K + T KE T+ A IDF+ D D GFMY + SG+ + + VD+GA+ETM DDRLIP Sbjct: 136 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPERTGKAFSACTHCVHCSTQSRDIQAKPTTTEIPKETEKTEQAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIP 396 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9733.22418.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9733.22418.1 >prot_M-pyrifera_M_contig9733.22418.1 ID=prot_M-pyrifera_M_contig9733.22418.1|Name=mRNA_M-pyrifera_M_contig9733.22418.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=255bp MEELLNTPMELGRNPDDYFNQKHLLRHKAEKMEEIISDRYFKDICVTGFTback to top mRNA from alignment at M-pyrifera_M_contig9733:33..797- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9733.22418.1 ID=mRNA_M-pyrifera_M_contig9733.22418.1|Name=mRNA_M-pyrifera_M_contig9733.22418.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=765bp|location=Sequence derived from alignment at M-pyrifera_M_contig9733:33..797- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9733:33..797- >mRNA_M-pyrifera_M_contig9733.22418.1 ID=mRNA_M-pyrifera_M_contig9733.22418.1|Name=mRNA_M-pyrifera_M_contig9733.22418.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1530bp|location=Sequence derived from alignment at M-pyrifera_M_contig9733:33..797- (Macrocystis pyrifera P11B4 male)back to top |