mRNA_M-pyrifera_M_contig97317.22413.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97317.22413.1
Unique NamemRNA_M-pyrifera_M_contig97317.22413.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A7S2T6J7_9CHLO (Hypothetical protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2T6J7_9CHLO)

HSP 1 Score: 363 bits (932), Expect = 7.680e-123
Identity = 167/232 (71.98%), Postives = 203/232 (87.50%), Query Frame = 1
Query:    1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696
            IKV GK GG +EDT L+ GI++DKDMSHPQMPK ++DAK+ ILTCPFEPPKPKTKH + + T E+Y +LH+TEQK+F DM+K+ KDSGAN++ICQWGFDDEANHLLY+N L A+RWVGGVE+ELIA+ATGGRIVPRF E+S DKLGKAG VKE+ FGT KDNM+VIEDCAN++AVTILVRGGN+MI+EE KRS+HDALCV RN+V+D+ IVYGGG+ E+AC+L V   +DKV
Sbjct:   74 IKVEGKVGGSIEDTSLVYGIVVDKDMSHPQMPKVIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKYEKLHETEQKYFADMIKQCKDSGANLIICQWGFDDEANHLLYKNELPAIRWVGGVEIELIAMATGGRIVPRFVELSEDKLGKAGKVKEVSFGTTKDNMIVIEDCANSKAVTILVRGGNRMILEETKRSLHDALCVARNLVKDNSIVYGGGSAEIACSLAVEAASDKV 305          
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A7S2T595_9CHLO (T-complex protein 1 subunit epsilon n=4 Tax=Eukaryota TaxID=2759 RepID=A0A7S2T595_9CHLO)

HSP 1 Score: 363 bits (932), Expect = 9.670e-121
Identity = 167/232 (71.98%), Postives = 203/232 (87.50%), Query Frame = 1
Query:    1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696
            IKV GK GG +EDT L+ GI++DKDMSHPQMPK ++DAK+ ILTCPFEPPKPKTKH + + T E+Y +LH+TEQK+F DM+K+ KDSGAN++ICQWGFDDEANHLLY+N L A+RWVGGVE+ELIA+ATGGRIVPRF E+S DKLGKAG VKE+ FGT KDNM+VIEDCAN++AVTILVRGGN+MI+EE KRS+HDALCV RN+V+D+ IVYGGG+ E+AC+L V   +DKV
Sbjct:  229 IKVEGKVGGSIEDTSLVYGIVVDKDMSHPQMPKVIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKYEKLHETEQKYFADMIKQCKDSGANLIICQWGFDDEANHLLYKNELPAIRWVGGVEIELIAMATGGRIVPRFVELSEDKLGKAGKVKEVSFGTTKDNMIVIEDCANSKAVTILVRGGNRMILEETKRSLHDALCVARNLVKDNSIVYGGGSAEIACSLAVEAASDKV 460          
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A482RI51_9ARCH (Thermosome subunit n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RI51_9ARCH)

HSP 1 Score: 357 bits (915), Expect = 4.440e-120
Identity = 162/232 (69.83%), Postives = 200/232 (86.21%), Query Frame = 1
Query:    1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696
            IKV GK GG+MEDTELIRG++LDK+ SHPQMPKDV+DAK+CILTCPFEPPKPKTKH L ++T E +  L + E K+FTDMV KVKDSGAN+V+CQWGFDDEANHLL QN L AVRWVGGVE+EL+AIATGGRI+PRFEEI+ +KLGKAG V+E+ +GT KD M+V+E CAN+R VT+ VRGGN MII+E KRS+HDA+CV RN++R++ IVYGGGA E+AC++ V++ AD +
Sbjct:   87 IKVEGKAGGKMEDTELIRGLVLDKEWSHPQMPKDVEDAKICILTCPFEPPKPKTKHQLNISTPEAFKALQEAEAKYFTDMVSKVKDSGANVVMCQWGFDDEANHLLLQNKLPAVRWVGGVELELLAIATGGRIIPRFEEITPEKLGKAGRVREVAYGTSKDRMLVVEQCANSRTVTVFVRGGNHMIIDEAKRSLHDAMCVARNLIRNNRIVYGGGAAEIACSIAVSDAADSI 318          
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A7S0SVG4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVG4_9STRA)

HSP 1 Score: 351 bits (901), Expect = 3.210e-119
Identity = 160/230 (69.57%), Postives = 201/230 (87.39%), Query Frame = 1
Query:    7 VSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696
            + GK GGR+EDTELI+GI++DK+ SHPQMPK++KDAK+CILTCPFEPPKPKTKH L + + E Y +L+  EQ++FT MVK+ KDSGAN+VICQWGFDDEANHLL QN L AVRWVGGVE+ELIAIATGGRIVPRF+E+++DKLGKAG V+E+ FGT K+ M+VIEDCA + AVT+L+RGGNKMI+EE KRS+HDA+CV+RN++RD+ +VYGGG+ E++CAL V+  AD V
Sbjct:    1 MEGKPGGRLEDTELIKGIVIDKEFSHPQMPKEIKDAKICILTCPFEPPKPKTKHKLDITSKEAYDKLYLREQEYFTTMVKQCKDSGANLVICQWGFDDEANHLLLQNELPAVRWVGGVELELIAIATGGRIVPRFQELTSDKLGKAGLVREVSFGTTKEKMLVIEDCACSNAVTVLIRGGNKMIVEEAKRSLHDAMCVVRNLIRDNRVVYGGGSAEISCALAVSSYADTV 230          
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A7S3PR08_9STRA (T-complex protein 1 subunit epsilon n=3 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR08_9STRA)

HSP 1 Score: 356 bits (913), Expect = 3.500e-118
Identity = 165/232 (71.12%), Postives = 203/232 (87.50%), Query Frame = 1
Query:    1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696
            IK+ GK GG +EDT LI GI+LDKD SHPQMPK+VKDAK+CILTCPFEPPKPKTKH L + +AE Y +L++ EQ++FTDMV+KVKDSGAN+VICQWGFDDEANHLL QN L AVRWVGGVE+ELIAIATGGRIVPRFEE++ +KLGKAG V+E+ FGT +D M++IE+C N+RAVT  VRGGNKMI+EE KRS+HDA+CV RN++RD+ IVYGGG+ E+AC++ V++ AD+V
Sbjct:  205 IKMEGKVGGTLEDTVLINGIVLDKDFSHPQMPKEVKDAKMCILTCPFEPPKPKTKHKLDINSAEAYRKLYEAEQQYFTDMVQKVKDSGANMVICQWGFDDEANHLLLQNKLPAVRWVGGVEIELIAIATGGRIVPRFEELTPEKLGKAGIVREVSFGTTRDRMLIIEECHNSRAVTCFVRGGNKMIVEEGKRSLHDAMCVTRNLIRDNRIVYGGGSAEIACSIAVSDYADEV 436          
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A7S3K1X2_9STRA (T-complex protein 1 subunit epsilon n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1X2_9STRA)

HSP 1 Score: 354 bits (909), Expect = 1.450e-117
Identity = 168/230 (73.04%), Postives = 197/230 (85.65%), Query Frame = 1
Query:    1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEAD 690
            IKV GK GGR+EDTELIRGI++DKD SHPQMPK VKDAK+CILTCPFEPPKPKTKH L + + E Y +LH  EQK+FTDMV+KVK  GAN+VICQWGFDDEANHLL  + L AVRWVGGVE+ELIAIATGGRIVPRFEE+ A KLG AG V+E+ FGT K+ +++IEDCA + AVTILVRGGNKMI++E KRS+HDA+CV+RN+V+D+ +VYGGGA EVACAL VA  AD
Sbjct:  206 IKVEGKPGGRLEDTELIRGIVVDKDFSHPQMPKCVKDAKMCILTCPFEPPKPKTKHKLDITSKEAYEKLHTNEQKYFTDMVEKVKKCGANLVICQWGFDDEANHLLLHHELPAVRWVGGVELELIAIATGGRIVPRFEELDAAKLGHAGIVREVSFGTSKERVLIIEDCAKSSAVTILVRGGNKMIVDEAKRSLHDAVCVVRNLVKDNRVVYGGGAAEVACALAVARVAD 435          
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A835ZI55_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI55_9STRA)

HSP 1 Score: 354 bits (909), Expect = 1.730e-117
Identity = 161/232 (69.40%), Postives = 199/232 (85.78%), Query Frame = 1
Query:    1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696
            IKV GK GG + DTEL+RGI++DK+ SHPQMPK++KDAKLCILTCPFEPPKPKTKH L + + E Y  LH+ EQ++F  MVK+ KDSGAN+VICQWGFDDEANHLL QN L AVRWVGGVE+ELIAIATGGRIVPRF+E+SADKLG AG V+E+ FGT KD M+VIE C N+ AVT+LVRGGNKMI++E KRS+HDA+CV+RN+++D+ IVYGGG+ E+AC+++V+  AD +
Sbjct:  212 IKVDGKPGGELGDTELVRGIVIDKEFSHPQMPKEIKDAKLCILTCPFEPPKPKTKHKLDITSKEAYERLHEREQQYFDTMVKQCKDSGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFQELSADKLGYAGTVREVAFGTTKDRMLVIEGCKNSNAVTVLVRGGNKMIVDEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEIACSIEVSNAADAI 443          
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A482RX78_9ARCH (T-complex protein 1 subunit epsilon n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX78_9ARCH)

HSP 1 Score: 353 bits (905), Expect = 1.970e-117
Identity = 161/232 (69.40%), Postives = 202/232 (87.07%), Query Frame = 1
Query:    1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696
            IK+ GK GGR+E+TELI+GI++DK+ SHPQMPK +KDAK+CILTCPFEPPKPKTKH L + + E Y +L+  EQ +FT MVK+ KDSGAN+VICQWGFDDEANHLL QN L AVRWVGGVE+ELIAIATGGRIVPRF E++A+KLGKAG V+E+ FGT K+ M+VIEDCA++ AVT+L+RGGNKMI+EE KRS+HDA+CV+RN+++D+ IVYGGG+ E+AC+L+V+  AD V
Sbjct:  161 IKMEGKPGGRLEETELIKGIVVDKEFSHPQMPKTIKDAKICILTCPFEPPKPKTKHKLDITSKEAYNKLYQYEQDYFTTMVKQCKDSGANLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFSELTAEKLGKAGTVREVSFGTTKERMLVIEDCASSNAVTVLIRGGNKMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEIACSLEVSAFADTV 392          
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A6P8I3I3_ACTTE (T-complex protein 1 subunit epsilon n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I3I3_ACTTE)

HSP 1 Score: 353 bits (907), Expect = 3.790e-117
Identity = 165/232 (71.12%), Postives = 199/232 (85.78%), Query Frame = 1
Query:    1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696
            IKV GK GG++EDT L++G+++DKDMSHPQMPK +KDA++ ILTCPFEPPKPKTKH L VAT E Y +L   E+  F +MVK+VKD+GAN+ ICQWGFDDEANHLL QN L AVRWVGG E+ELIAIATGGRIVPRF E++A+KLGKAG+V+E+ FGT +D M+VIEDC N+RAVTI +RGGN+MIIEE KRSIHDALCV+RN+VRD+ IVYGGGA E+ C+L VA EADK+
Sbjct:  215 IKVEGKEGGKLEDTILVKGVVVDKDMSHPQMPKSIKDARIAILTCPFEPPKPKTKHKLDVATVEDYKKLQQYEKDKFVEMVKQVKDTGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGKAGSVRELNFGTTRDKMLVIEDCHNSRAVTIFIRGGNRMIIEEAKRSIHDALCVVRNLVRDNRIVYGGGATEITCSLAVASEADKI 446          
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A7S2SNU9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNU9_9STRA)

HSP 1 Score: 349 bits (896), Expect = 5.620e-117
Identity = 160/232 (68.97%), Postives = 201/232 (86.64%), Query Frame = 1
Query:    1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696
            IK+ GK GGR+++TEL++GI++DKD SHPQMPK V+DAK+CILTCPFEPPKPKTKH L + + E Y +L+D EQ +F +MV++ KD GAN+VICQWGFDDEANHLL QN L AVRWVGGVE+ELIAIATGGRIVPRF E+SA+KLG+AG V+E+ FGTLK+ M+VIEDCAN+ AVTILVRGGN MI+EE KRS+HDA+CV+RN+++D+ IVYGGGA E+AC+  +++ AD V
Sbjct:  103 IKMEGKPGGRLDETELVQGIVVDKDFSHPQMPKVVEDAKMCILTCPFEPPKPKTKHKLDITSREAYEKLYDQEQAYFKEMVQQCKDCGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFSELSAEKLGRAGTVREVAFGTLKERMLVIEDCANSSAVTILVRGGNSMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGAAEIACSNAISKYADTV 334          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2T6J7_9CHLO7.680e-12371.98Hypothetical protein n=1 Tax=Chloropicon primus Ta... [more]
A0A7S2T595_9CHLO9.670e-12171.98T-complex protein 1 subunit epsilon n=4 Tax=Eukary... [more]
A0A482RI51_9ARCH4.440e-12069.83Thermosome subunit n=1 Tax=archaeon TaxID=1906665 ... [more]
A0A7S0SVG4_9STRA3.210e-11969.57Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S3PR08_9STRA3.500e-11871.12T-complex protein 1 subunit epsilon n=3 Tax=Aplano... [more]
A0A7S3K1X2_9STRA1.450e-11773.04T-complex protein 1 subunit epsilon n=2 Tax=Aureou... [more]
A0A835ZI55_9STRA1.730e-11769.40T-complex protein 1 subunit epsilon n=1 Tax=Tribon... [more]
A0A482RX78_9ARCH1.970e-11769.40T-complex protein 1 subunit epsilon n=1 Tax=archae... [more]
A0A6P8I3I3_ACTTE3.790e-11771.12T-complex protein 1 subunit epsilon n=1 Tax=Actini... [more]
A0A7S2SNU9_9STRA5.620e-11768.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97317contigM-pyrifera_M_contig97317:16..711 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score245.0
Seed ortholog evalue2.3e-62
Seed eggNOG ortholog13349.G1WYN7
Preferred nameCCT5
KEGG koko:K09497
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005832,GO:0005856,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031
EggNOG free text desc.assists the folding of proteins upon ATP hydrolysis
EggNOG OGs38CU0@33154,3NVV4@4751,3QN0C@4890,COG0459@1,KOG0357@2759
COG Functional cat.O
Best tax levelAscomycota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03110,ko04147
Exons1
Model size696
Cds size459
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816889.783428-CDS-M-pyrifera_M_contig97317:15..4741622816889.783428-CDS-M-pyrifera_M_contig97317:15..474Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97317 16..474 -
1692278238.6506183-CDS-M-pyrifera_M_contig97317:15..4741692278238.6506183-CDS-M-pyrifera_M_contig97317:15..474Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97317 16..474 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816889.793949-UTR-M-pyrifera_M_contig97317:474..7111622816889.793949-UTR-M-pyrifera_M_contig97317:474..711Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig97317 475..711 -
1692278238.663194-UTR-M-pyrifera_M_contig97317:474..7111692278238.663194-UTR-M-pyrifera_M_contig97317:474..711Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig97317 475..711 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97317.22413.1prot_M-pyrifera_M_contig97317.22413.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97317 16..474 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97317.22413.1

>prot_M-pyrifera_M_contig97317.22413.1 ID=prot_M-pyrifera_M_contig97317.22413.1|Name=mRNA_M-pyrifera_M_contig97317.22413.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp
MVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIAT
GGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILV
RGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEA
DKV
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mRNA from alignment at M-pyrifera_M_contig97317:16..711-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97317.22413.1 ID=mRNA_M-pyrifera_M_contig97317.22413.1|Name=mRNA_M-pyrifera_M_contig97317.22413.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig97317:16..711- (Macrocystis pyrifera P11B4 male)
ATTAAGGTCTCTGGAAAGACTGGAGGCCGTATGGAGGACACGGAGCTGAT CCGTGGCATCCTCCTCGACAAGGATATGAGCCACCCACAGATGCCCAAGG ACGTGAAGGACGCCAAGCTGTGCATCTTGACGTGCCCCTTCGAGCCTCCG AAGCCCAAGACCAAGCACTCCCTCACCGTGGCCACGGCAGAGCGCTACTA GGAGCTGCACGATACGGAGCAGAAGTTCTTCACCGACATGGTGAAGAAGG TTAAGGACTCTGGTGCGAACATCGTCATTTGCCAGTGGGGATTCGATGAC GAGGCAAACCACCTGCTGTATCAGAATGGCCTCAACGCTGTTCGTTGGGT TGGAGGAGTGGAGATGGAGCTCATCGCCATCGCCACTGGTGGCCGCATTG TGCCCCGCTTCGAGGAGATCTCTGCAGACAAGCTTGGCAAGGCCGGCAAC GTGAAGGAGATCAAGTTTGGCACTCTCAAGGACAACATGATGGTGATCGA AGACTGCGCCAACACGCGCGCAGTGACCATCCTGGTCCGCGGTGGCAACA AGATGATCATCGAGGAGATCAAGCGCAGCATCCACGACGCTCTTTGCGTT ATCCGCAACATGGTCCGCGACTCGGGCATCGTCTACGGAGGCGGTGCCCC TGAGGTGGCCTGTGCCCTGAAGGTGGCGGAGGAGGCAGACAAGGTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97317:16..711-

>mRNA_M-pyrifera_M_contig97317.22413.1 ID=mRNA_M-pyrifera_M_contig97317.22413.1|Name=mRNA_M-pyrifera_M_contig97317.22413.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig97317:16..711- (Macrocystis pyrifera P11B4 male)
ATGGTGAAGAAGGTTAAGGACTCTGGTGCGAACATCGTCATTTGCCAGTG
GGGATTCGATGACGAGGCAAACCACCTGCTGTATCAGAATGGCCTCAACG
CTGTTCGTTGGGTTGGAGGAGTGGAGATGGAGCTCATCGCCATCGCCACT
GGTGGCCGCATTGTGCCCCGCTTCGAGGAGATCTCTGCAGACAAGCTTGG
CAAGGCCGGCAACGTGAAGGAGATCAAGTTTGGCACTCTCAAGGACAACA
TGATGGTGATCGAAGACTGCGCCAACACGCGCGCAGTGACCATCCTGGTC
CGCGGTGGCAACAAGATGATCATCGAGGAGATCAAGCGCAGCATCCACGA
CGCTCTTTGCGTTATCCGCAACATGGTCCGCGACTCGGGCATCGTCTACG
GAGGCGGTGCCCCTGAGGTGGCCTGTGCCCTGAAGGTGGCGGAGGAGGCA
GACAAGGTAATGGTGAAGAAGGTTAAGGACTCTGGTGCGAACATCGTCAT
TTGCCAGTGGGGATTCGATGACGAGGCAAACCACCTGCTGTATCAGAATG
GCCTCAACGCTGTTCGTTGGGTTGGAGGAGTGGAGATGGAGCTCATCGCC
ATCGCCACTGGTGGCCGCATTGTGCCCCGCTTCGAGGAGATCTCTGCAGA
CAAGCTTGGCAAGGCCGGCAACGTGAAGGAGATCAAGTTTGGCACTCTCA
AGGACAACATGATGGTGATCGAAGACTGCGCCAACACGCGCGCAGTGACC
ATCCTGGTCCGCGGTGGCAACAAGATGATCATCGAGGAGATCAAGCGCAG
CATCCACGACGCTCTTTGCGTTATCCGCAACATGGTCCGCGACTCGGGCA
TCGTCTACGGAGGCGGTGCCCCTGAGGTGGCCTGTGCCCTGAAGGTGGCG
GAGGAGGCAGACAAGGTA
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