mRNA_M-pyrifera_M_contig97317.22413.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A7S2T6J7_9CHLO (Hypothetical protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2T6J7_9CHLO) HSP 1 Score: 363 bits (932), Expect = 7.680e-123 Identity = 167/232 (71.98%), Postives = 203/232 (87.50%), Query Frame = 1 Query: 1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696 IKV GK GG +EDT L+ GI++DKDMSHPQMPK ++DAK+ ILTCPFEPPKPKTKH + + T E+Y +LH+TEQK+F DM+K+ KDSGAN++ICQWGFDDEANHLLY+N L A+RWVGGVE+ELIA+ATGGRIVPRF E+S DKLGKAG VKE+ FGT KDNM+VIEDCAN++AVTILVRGGN+MI+EE KRS+HDALCV RN+V+D+ IVYGGG+ E+AC+L V +DKV Sbjct: 74 IKVEGKVGGSIEDTSLVYGIVVDKDMSHPQMPKVIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKYEKLHETEQKYFADMIKQCKDSGANLIICQWGFDDEANHLLYKNELPAIRWVGGVEIELIAMATGGRIVPRFVELSEDKLGKAGKVKEVSFGTTKDNMIVIEDCANSKAVTILVRGGNRMILEETKRSLHDALCVARNLVKDNSIVYGGGSAEIACSLAVEAASDKV 305
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A7S2T595_9CHLO (T-complex protein 1 subunit epsilon n=4 Tax=Eukaryota TaxID=2759 RepID=A0A7S2T595_9CHLO) HSP 1 Score: 363 bits (932), Expect = 9.670e-121 Identity = 167/232 (71.98%), Postives = 203/232 (87.50%), Query Frame = 1 Query: 1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696 IKV GK GG +EDT L+ GI++DKDMSHPQMPK ++DAK+ ILTCPFEPPKPKTKH + + T E+Y +LH+TEQK+F DM+K+ KDSGAN++ICQWGFDDEANHLLY+N L A+RWVGGVE+ELIA+ATGGRIVPRF E+S DKLGKAG VKE+ FGT KDNM+VIEDCAN++AVTILVRGGN+MI+EE KRS+HDALCV RN+V+D+ IVYGGG+ E+AC+L V +DKV Sbjct: 229 IKVEGKVGGSIEDTSLVYGIVVDKDMSHPQMPKVIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKYEKLHETEQKYFADMIKQCKDSGANLIICQWGFDDEANHLLYKNELPAIRWVGGVEIELIAMATGGRIVPRFVELSEDKLGKAGKVKEVSFGTTKDNMIVIEDCANSKAVTILVRGGNRMILEETKRSLHDALCVARNLVKDNSIVYGGGSAEIACSLAVEAASDKV 460
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A482RI51_9ARCH (Thermosome subunit n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RI51_9ARCH) HSP 1 Score: 357 bits (915), Expect = 4.440e-120 Identity = 162/232 (69.83%), Postives = 200/232 (86.21%), Query Frame = 1 Query: 1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696 IKV GK GG+MEDTELIRG++LDK+ SHPQMPKDV+DAK+CILTCPFEPPKPKTKH L ++T E + L + E K+FTDMV KVKDSGAN+V+CQWGFDDEANHLL QN L AVRWVGGVE+EL+AIATGGRI+PRFEEI+ +KLGKAG V+E+ +GT KD M+V+E CAN+R VT+ VRGGN MII+E KRS+HDA+CV RN++R++ IVYGGGA E+AC++ V++ AD + Sbjct: 87 IKVEGKAGGKMEDTELIRGLVLDKEWSHPQMPKDVEDAKICILTCPFEPPKPKTKHQLNISTPEAFKALQEAEAKYFTDMVSKVKDSGANVVMCQWGFDDEANHLLLQNKLPAVRWVGGVELELLAIATGGRIIPRFEEITPEKLGKAGRVREVAYGTSKDRMLVVEQCANSRTVTVFVRGGNHMIIDEAKRSLHDAMCVARNLIRNNRIVYGGGAAEIACSIAVSDAADSI 318
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A7S0SVG4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVG4_9STRA) HSP 1 Score: 351 bits (901), Expect = 3.210e-119 Identity = 160/230 (69.57%), Postives = 201/230 (87.39%), Query Frame = 1 Query: 7 VSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696 + GK GGR+EDTELI+GI++DK+ SHPQMPK++KDAK+CILTCPFEPPKPKTKH L + + E Y +L+ EQ++FT MVK+ KDSGAN+VICQWGFDDEANHLL QN L AVRWVGGVE+ELIAIATGGRIVPRF+E+++DKLGKAG V+E+ FGT K+ M+VIEDCA + AVT+L+RGGNKMI+EE KRS+HDA+CV+RN++RD+ +VYGGG+ E++CAL V+ AD V Sbjct: 1 MEGKPGGRLEDTELIKGIVIDKEFSHPQMPKEIKDAKICILTCPFEPPKPKTKHKLDITSKEAYDKLYLREQEYFTTMVKQCKDSGANLVICQWGFDDEANHLLLQNELPAVRWVGGVELELIAIATGGRIVPRFQELTSDKLGKAGLVREVSFGTTKEKMLVIEDCACSNAVTVLIRGGNKMIVEEAKRSLHDAMCVVRNLIRDNRVVYGGGSAEISCALAVSSYADTV 230
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A7S3PR08_9STRA (T-complex protein 1 subunit epsilon n=3 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR08_9STRA) HSP 1 Score: 356 bits (913), Expect = 3.500e-118 Identity = 165/232 (71.12%), Postives = 203/232 (87.50%), Query Frame = 1 Query: 1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696 IK+ GK GG +EDT LI GI+LDKD SHPQMPK+VKDAK+CILTCPFEPPKPKTKH L + +AE Y +L++ EQ++FTDMV+KVKDSGAN+VICQWGFDDEANHLL QN L AVRWVGGVE+ELIAIATGGRIVPRFEE++ +KLGKAG V+E+ FGT +D M++IE+C N+RAVT VRGGNKMI+EE KRS+HDA+CV RN++RD+ IVYGGG+ E+AC++ V++ AD+V Sbjct: 205 IKMEGKVGGTLEDTVLINGIVLDKDFSHPQMPKEVKDAKMCILTCPFEPPKPKTKHKLDINSAEAYRKLYEAEQQYFTDMVQKVKDSGANMVICQWGFDDEANHLLLQNKLPAVRWVGGVEIELIAIATGGRIVPRFEELTPEKLGKAGIVREVSFGTTRDRMLIIEECHNSRAVTCFVRGGNKMIVEEGKRSLHDAMCVTRNLIRDNRIVYGGGSAEIACSIAVSDYADEV 436
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A7S3K1X2_9STRA (T-complex protein 1 subunit epsilon n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1X2_9STRA) HSP 1 Score: 354 bits (909), Expect = 1.450e-117 Identity = 168/230 (73.04%), Postives = 197/230 (85.65%), Query Frame = 1 Query: 1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEAD 690 IKV GK GGR+EDTELIRGI++DKD SHPQMPK VKDAK+CILTCPFEPPKPKTKH L + + E Y +LH EQK+FTDMV+KVK GAN+VICQWGFDDEANHLL + L AVRWVGGVE+ELIAIATGGRIVPRFEE+ A KLG AG V+E+ FGT K+ +++IEDCA + AVTILVRGGNKMI++E KRS+HDA+CV+RN+V+D+ +VYGGGA EVACAL VA AD Sbjct: 206 IKVEGKPGGRLEDTELIRGIVVDKDFSHPQMPKCVKDAKMCILTCPFEPPKPKTKHKLDITSKEAYEKLHTNEQKYFTDMVEKVKKCGANLVICQWGFDDEANHLLLHHELPAVRWVGGVELELIAIATGGRIVPRFEELDAAKLGHAGIVREVSFGTSKERVLIIEDCAKSSAVTILVRGGNKMIVDEAKRSLHDAVCVVRNLVKDNRVVYGGGAAEVACALAVARVAD 435
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A835ZI55_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI55_9STRA) HSP 1 Score: 354 bits (909), Expect = 1.730e-117 Identity = 161/232 (69.40%), Postives = 199/232 (85.78%), Query Frame = 1 Query: 1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696 IKV GK GG + DTEL+RGI++DK+ SHPQMPK++KDAKLCILTCPFEPPKPKTKH L + + E Y LH+ EQ++F MVK+ KDSGAN+VICQWGFDDEANHLL QN L AVRWVGGVE+ELIAIATGGRIVPRF+E+SADKLG AG V+E+ FGT KD M+VIE C N+ AVT+LVRGGNKMI++E KRS+HDA+CV+RN+++D+ IVYGGG+ E+AC+++V+ AD + Sbjct: 212 IKVDGKPGGELGDTELVRGIVIDKEFSHPQMPKEIKDAKLCILTCPFEPPKPKTKHKLDITSKEAYERLHEREQQYFDTMVKQCKDSGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFQELSADKLGYAGTVREVAFGTTKDRMLVIEGCKNSNAVTVLVRGGNKMIVDEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEIACSIEVSNAADAI 443
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A482RX78_9ARCH (T-complex protein 1 subunit epsilon n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX78_9ARCH) HSP 1 Score: 353 bits (905), Expect = 1.970e-117 Identity = 161/232 (69.40%), Postives = 202/232 (87.07%), Query Frame = 1 Query: 1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696 IK+ GK GGR+E+TELI+GI++DK+ SHPQMPK +KDAK+CILTCPFEPPKPKTKH L + + E Y +L+ EQ +FT MVK+ KDSGAN+VICQWGFDDEANHLL QN L AVRWVGGVE+ELIAIATGGRIVPRF E++A+KLGKAG V+E+ FGT K+ M+VIEDCA++ AVT+L+RGGNKMI+EE KRS+HDA+CV+RN+++D+ IVYGGG+ E+AC+L+V+ AD V Sbjct: 161 IKMEGKPGGRLEETELIKGIVVDKEFSHPQMPKTIKDAKICILTCPFEPPKPKTKHKLDITSKEAYNKLYQYEQDYFTTMVKQCKDSGANLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFSELTAEKLGKAGTVREVSFGTTKERMLVIEDCASSNAVTVLIRGGNKMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEIACSLEVSAFADTV 392
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A6P8I3I3_ACTTE (T-complex protein 1 subunit epsilon n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I3I3_ACTTE) HSP 1 Score: 353 bits (907), Expect = 3.790e-117 Identity = 165/232 (71.12%), Postives = 199/232 (85.78%), Query Frame = 1 Query: 1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696 IKV GK GG++EDT L++G+++DKDMSHPQMPK +KDA++ ILTCPFEPPKPKTKH L VAT E Y +L E+ F +MVK+VKD+GAN+ ICQWGFDDEANHLL QN L AVRWVGG E+ELIAIATGGRIVPRF E++A+KLGKAG+V+E+ FGT +D M+VIEDC N+RAVTI +RGGN+MIIEE KRSIHDALCV+RN+VRD+ IVYGGGA E+ C+L VA EADK+ Sbjct: 215 IKVEGKEGGKLEDTILVKGVVVDKDMSHPQMPKSIKDARIAILTCPFEPPKPKTKHKLDVATVEDYKKLQQYEKDKFVEMVKQVKDTGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGKAGSVRELNFGTTRDKMLVIEDCHNSRAVTIFIRGGNRMIIEEAKRSIHDALCVVRNLVRDNRIVYGGGATEITCSLAVASEADKI 446
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Match: A0A7S2SNU9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNU9_9STRA) HSP 1 Score: 349 bits (896), Expect = 5.620e-117 Identity = 160/232 (68.97%), Postives = 201/232 (86.64%), Query Frame = 1 Query: 1 IKVSGKTGGRMEDTELIRGILLDKDMSHPQMPKDVKDAKLCILTCPFEPPKPKTKHSLTVATAERY*ELHDTEQKFFTDMVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATGGRIVPRFEEISADKLGKAGNVKEIKFGTLKDNMMVIEDCANTRAVTILVRGGNKMIIEEIKRSIHDALCVIRNMVRDSGIVYGGGAPEVACALKVAEEADKV 696 IK+ GK GGR+++TEL++GI++DKD SHPQMPK V+DAK+CILTCPFEPPKPKTKH L + + E Y +L+D EQ +F +MV++ KD GAN+VICQWGFDDEANHLL QN L AVRWVGGVE+ELIAIATGGRIVPRF E+SA+KLG+AG V+E+ FGTLK+ M+VIEDCAN+ AVTILVRGGN MI+EE KRS+HDA+CV+RN+++D+ IVYGGGA E+AC+ +++ AD V Sbjct: 103 IKMEGKPGGRLDETELVQGIVVDKDFSHPQMPKVVEDAKMCILTCPFEPPKPKTKHKLDITSREAYEKLYDQEQAYFKEMVQQCKDCGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFSELSAEKLGRAGTVREVAFGTLKERMLVIEDCANSSAVTILVRGGNSMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGAAEIACSNAISKYADTV 334 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97317.22413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97317.22413.1 >prot_M-pyrifera_M_contig97317.22413.1 ID=prot_M-pyrifera_M_contig97317.22413.1|Name=mRNA_M-pyrifera_M_contig97317.22413.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp MVKKVKDSGANIVICQWGFDDEANHLLYQNGLNAVRWVGGVEMELIAIATback to top mRNA from alignment at M-pyrifera_M_contig97317:16..711- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97317.22413.1 ID=mRNA_M-pyrifera_M_contig97317.22413.1|Name=mRNA_M-pyrifera_M_contig97317.22413.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig97317:16..711- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97317:16..711- >mRNA_M-pyrifera_M_contig97317.22413.1 ID=mRNA_M-pyrifera_M_contig97317.22413.1|Name=mRNA_M-pyrifera_M_contig97317.22413.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig97317:16..711- (Macrocystis pyrifera P11B4 male)back to top |